RNA–Protein interactions for RNA: ENST00000524463.5

CTSC-203, Transcript of cathepsin C, humanhuman

TSL 1 (best) BASIC

Gene CTSC, Length 6,125 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-203ENST00000524463 USP6P35125 1406 aa11.15□□□□□ -0.63
CTSC-203ENST00000524463 IFNAR1P17181 557 aa11.15□□□□□ -0.63
CTSC-203ENST00000524463 STAT5BP51692 787 aa11.15□□□□□ -0.63
CTSC-203ENST00000524463 LRRC74AQ0VAA2 488 aa11.15□□□□□ -0.63
CTSC-203ENST00000524463 SPDYAQ5MJ70 313 aa11.15□□□□□ -0.63
CTSC-203ENST00000524463 CATSPER3Q86XQ3 398 aa11.15□□□□□ -0.63
CTSC-203ENST00000524463 CPA5Q8WXQ8 436 aa11.15□□□□□ -0.63
CTSC-203ENST00000524463 KLHL29Q96CT2 875 aa11.15□□□□□ -0.63
CTSC-203ENST00000524463 FAM49BQ9NUQ9 324 aa11.15□□□□□ -0.63
CTSC-203ENST00000524463 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.15□□□□□ -0.63
CTSC-203ENST00000524463 DCTN4Q9UJW0 460 aa11.15□□□□□ -0.63
CTSC-203ENST00000524463 SSH2Q76I76 1423 aa11.14□□□□□ -0.63
CTSC-203ENST00000524463 UBE2Q2LH0YL09 131 aa11.14□□□□□ -0.63
CTSC-203ENST00000524463 EEF1DP29692 281 aaKnown RBP11.14□□□□□ -0.63
CTSC-203ENST00000524463 CHRNA3P32297 505 aa11.14□□□□□ -0.63
CTSC-203ENST00000524463 PRCPP42785 496 aa11.14□□□□□ -0.63
CTSC-203ENST00000524463 KRT76Q01546 638 aa11.14□□□□□ -0.63
CTSC-203ENST00000524463 KCNH2Q12809 1159 aa11.14□□□□□ -0.63
CTSC-203ENST00000524463 CRLF3Q8IUI8 442 aa11.14□□□□□ -0.63
CTSC-203ENST00000524463 TRIM42Q8IWZ5 723 aa11.14□□□□□ -0.63
CTSC-203ENST00000524463 FAM81BQ96LP2 452 aa11.14□□□□□ -0.63
CTSC-203ENST00000524463 TMEM39BQ9GZU3 492 aa11.14□□□□□ -0.63
CTSC-203ENST00000524463 JPH1Q9HDC5 661 aaPredicted RBP11.14□□□□□ -0.63
CTSC-203ENST00000524463 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.14□□□□□ -0.63
CTSC-203ENST00000524463 RPS6KA5O75582 802 aa11.14□□□□□ -0.63
CTSC-203ENST00000524463 P4HBP07237 508 aaKnown RBP11.14□□□□□ -0.63
CTSC-203ENST00000524463 CYP19A1P11511 503 aaPredicted RBP11.14□□□□□ -0.63
CTSC-203ENST00000524463 CDC27P30260 824 aa11.14□□□□□ -0.63
CTSC-203ENST00000524463 GMPSP49915 693 aaPredicted RBP11.14□□□□□ -0.63
CTSC-203ENST00000524463 ROR1Q01973 937 aa11.14□□□□□ -0.63
CTSC-203ENST00000524463 EZH2Q15910 746 aaKnown RBP11.14□□□□□ -0.63
CTSC-203ENST00000524463 BZW1Q7L1Q6 419 aaKnown RBP11.14□□□□□ -0.63
CTSC-203ENST00000524463 PID1Q7Z2X4 250 aa11.14□□□□□ -0.63
CTSC-203ENST00000524463 CCDC124Q96CT7 223 aaKnown RBP11.14□□□□□ -0.63
CTSC-203ENST00000524463 PABPC5Q96DU9 382 aaKnown RBP11.14□□□□□ -0.63
CTSC-203ENST00000524463 PBKQ96KB5 322 aa11.14□□□□□ -0.63
CTSC-203ENST00000524463 PLAAQ9Y263 795 aa11.14□□□□□ -0.63
CTSC-203ENST00000524463 ABCA5Q8WWZ7 1642 aa11.14□□□□□ -0.63
CTSC-203ENST00000524463 GTPBP10A4D1E9 387 aaKnown RBP11.14□□□□□ -0.63
CTSC-203ENST00000524463 H0Y3Z8 333 aa11.14□□□□□ -0.63
CTSC-203ENST00000524463 TMCC1O94876 653 aa11.14□□□□□ -0.63
CTSC-203ENST00000524463 WEE1P30291 646 aa11.14□□□□□ -0.63
CTSC-203ENST00000524463 RFX3P48380 749 aa11.14□□□□□ -0.63
CTSC-203ENST00000524463 ATXN3P54252 364 aaPredicted RBP11.14□□□□□ -0.63
CTSC-203ENST00000524463 SNAPC2Q13487 334 aa11.14□□□□□ -0.63
CTSC-203ENST00000524463 GTF2H3Q13889 308 aa11.14□□□□□ -0.63
CTSC-203ENST00000524463 PFKFB3Q16875 520 aaPredicted RBP11.14□□□□□ -0.63
CTSC-203ENST00000524463 APPL2Q8NEU8 664 aa11.14□□□□□ -0.63
CTSC-203ENST00000524463 PRG3Q9Y2Y8 225 aaPredicted RBP11.14□□□□□ -0.63
CTSC-203ENST00000524463 SH3BP1Q9Y3L3 701 aa11.14□□□□□ -0.63
CTSC-203ENST00000524463 A0A1W2PQ27 194 aa11.14□□□□□ -0.63
CTSC-203ENST00000524463 A0A1W2PQ64 194 aa11.14□□□□□ -0.63
CTSC-203ENST00000524463 A0A1W2PQD8 194 aa11.14□□□□□ -0.63
CTSC-203ENST00000524463 ASB14A6NK59 587 aa11.14□□□□□ -0.63
CTSC-203ENST00000524463 A6NNZ2 444 aa11.14□□□□□ -0.63
CTSC-203ENST00000524463 CDH6P55285 790 aa11.14□□□□□ -0.63
CTSC-203ENST00000524463 TUBB8Q3ZCM7 444 aa11.14□□□□□ -0.63
CTSC-203ENST00000524463 CCDC33Q8N5R6 958 aa11.14□□□□□ -0.63
CTSC-203ENST00000524463 TDRD7Q8NHU6 1098 aaKnown RBP11.14□□□□□ -0.63
CTSC-203ENST00000524463 HASPINQ8TF76 798 aa11.14□□□□□ -0.63
CTSC-203ENST00000524463 CYP4F11Q9HBI6 524 aa11.14□□□□□ -0.63
CTSC-203ENST00000524463 ADA2Q9NZK5 511 aa11.14□□□□□ -0.63
CTSC-203ENST00000524463 KIF24Q5T7B8 1368 aa11.14□□□□□ -0.63
CTSC-203ENST00000524463 EMSYQ7Z589 1322 aa11.14□□□□□ -0.63
CTSC-203ENST00000524463 ENDOD1O94919 500 aa11.13□□□□□ -0.63
CTSC-203ENST00000524463 ABCD1P33897 745 aa11.13□□□□□ -0.63
CTSC-203ENST00000524463 EPHB4P54760 987 aa11.13□□□□□ -0.63
CTSC-203ENST00000524463 SESN2P58004 480 aaPredicted RBP11.13□□□□□ -0.63
CTSC-203ENST00000524463 DRAP1Q14919 205 aaPredicted RBP11.13□□□□□ -0.63
CTSC-203ENST00000524463 WDR72Q3MJ13 1102 aa11.13□□□□□ -0.63
CTSC-203ENST00000524463 GPD1LQ8N335 351 aa11.13□□□□□ -0.63
CTSC-203ENST00000524463 CLMNQ96JQ2 1002 aa11.13□□□□□ -0.63
CTSC-203ENST00000524463 ELAC2Q9BQ52 826 aaKnown RBP11.13□□□□□ -0.63
CTSC-203ENST00000524463 BRIP1Q9BX63 1249 aa11.13□□□□□ -0.63
CTSC-203ENST00000524463 MRPL42Q9Y6G3 142 aaKnown RBP11.13□□□□□ -0.63
CTSC-203ENST00000524463 GOLGA8RI6L899 631 aa11.13□□□□□ -0.63
CTSC-203ENST00000524463 CYP26A1O43174 497 aa11.13□□□□□ -0.63
CTSC-203ENST00000524463 DPEP1P16444 411 aa11.13□□□□□ -0.63
CTSC-203ENST00000524463 ARL4CP56559 192 aa11.13□□□□□ -0.63
CTSC-203ENST00000524463 ORC1Q13415 861 aa11.13□□□□□ -0.63
CTSC-203ENST00000524463 RGS9BPQ6ZS82 235 aa11.13□□□□□ -0.63
CTSC-203ENST00000524463 ZBED8Q8IZ13 594 aa11.13□□□□□ -0.63
CTSC-203ENST00000524463 PGBD4Q96DM1 585 aa11.13□□□□□ -0.63
CTSC-203ENST00000524463 VMP1Q96GC9 406 aa11.13□□□□□ -0.63
CTSC-203ENST00000524463 ENTPD7Q9NQZ7 604 aa11.13□□□□□ -0.63
CTSC-203ENST00000524463 DNMT1P26358 1616 aaKnown RBP11.13□□□□□ -0.63
CTSC-203ENST00000524463 ARHGAP10A1A4S6 786 aa11.13□□□□□ -0.63
CTSC-203ENST00000524463 ARIH2O95376 493 aa11.13□□□□□ -0.63
CTSC-203ENST00000524463 FTLP02792 175 aaPredicted RBP11.13□□□□□ -0.63
CTSC-203ENST00000524463 PYGLP06737 847 aa11.13□□□□□ -0.63
CTSC-203ENST00000524463 TPI1P60174 286 aa11.13□□□□□ -0.63
CTSC-203ENST00000524463 LRRC14Q15048 493 aa11.13□□□□□ -0.63
CTSC-203ENST00000524463 DEFB128Q7Z7B8 93 aa11.13□□□□□ -0.63
CTSC-203ENST00000524463 STAP1Q9ULZ2 295 aa11.13□□□□□ -0.63
CTSC-203ENST00000524463 MEFVO15553 781 aaPredicted RBP11.13□□□□□ -0.63
CTSC-203ENST00000524463 IFNA8P32881 189 aa11.13□□□□□ -0.63
CTSC-203ENST00000524463 PDIA2Q13087 525 aaKnown RBP11.13□□□□□ -0.63
CTSC-203ENST00000524463 SGO1Q5FBB7 561 aa11.13□□□□□ -0.63
CTSC-203ENST00000524463 NUGGCQ68CJ6 796 aa11.13□□□□□ -0.63
CTSC-203ENST00000524463 ZKSCAN4Q969J2 545 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms