RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 STRN3Q13033 797 aa13.78□□□□□ -0.2
CCNC-216ENST00000523961 ADGRE1Q14246 886 aa13.78□□□□□ -0.2
CCNC-216ENST00000523961 E2F4Q16254 413 aa13.78□□□□□ -0.2
CCNC-216ENST00000523961 LONRF3Q496Y0 759 aa13.78□□□□□ -0.2
CCNC-216ENST00000523961 SPOUT1Q5T280 376 aaKnown RBP13.78□□□□□ -0.2
CCNC-216ENST00000523961 ADALQ6DHV7 355 aa13.78□□□□□ -0.2
CCNC-216ENST00000523961 AGMOQ6ZNB7 445 aa13.78□□□□□ -0.2
CCNC-216ENST00000523961 DYMQ7RTS9 669 aa13.78□□□□□ -0.2
CCNC-216ENST00000523961 APBB1IPQ7Z5R6 666 aaPredicted RBP13.78□□□□□ -0.2
CCNC-216ENST00000523961 CDR2LQ86X02 465 aaPredicted RBP13.78□□□□□ -0.2
CCNC-216ENST00000523961 LRRC43Q8N309 656 aa13.78□□□□□ -0.2
CCNC-216ENST00000523961 SMG8Q8ND04 991 aaKnown RBP13.78□□□□□ -0.2
CCNC-216ENST00000523961 TMEM161BQ8NDZ6 487 aa13.78□□□□□ -0.2
CCNC-216ENST00000523961 DDX12PQ92771 950 aa13.78□□□□□ -0.2
CCNC-216ENST00000523961 DHX58Q96C10 678 aa13.78□□□□□ -0.2
CCNC-216ENST00000523961 C11orf84Q9BUA3 381 aaPredicted RBP13.78□□□□□ -0.2
CCNC-216ENST00000523961 MRPL4Q9BYD3 311 aaKnown RBP13.78□□□□□ -0.2
CCNC-216ENST00000523961 LRRC27Q9C0I9 530 aa13.78□□□□□ -0.2
CCNC-216ENST00000523961 ZHX3Q9H4I2 956 aa13.78□□□□□ -0.2
CCNC-216ENST00000523961 PDZD7Q9H5P4 517 aa13.78□□□□□ -0.2
CCNC-216ENST00000523961 RSAD1Q9HA92 442 aa13.78□□□□□ -0.2
CCNC-216ENST00000523961 AAASQ9NRG9 546 aa13.78□□□□□ -0.2
CCNC-216ENST00000523961 TYW1Q9NV66 732 aaKnown RBP13.78□□□□□ -0.2
CCNC-216ENST00000523961 CHD9Q3L8U1 2897 aa13.78□□□□□ -0.2
CCNC-216ENST00000523961 TTLL13PA6NNM8 815 aa13.77□□□□□ -0.21
CCNC-216ENST00000523961 MEIS3P2A8K0S8 358 aa13.77□□□□□ -0.21
CCNC-216ENST00000523961 H3BNC9 293 aa13.77□□□□□ -0.21
CCNC-216ENST00000523961 POLR2DO15514 142 aaKnown RBP13.77□□□□□ -0.21
CCNC-216ENST00000523961 TRAK2O60296 914 aa13.77□□□□□ -0.21
CCNC-216ENST00000523961 OFD1O75665 1012 aa13.77□□□□□ -0.21
CCNC-216ENST00000523961 LAG3P18627 525 aa13.77□□□□□ -0.21
CCNC-216ENST00000523961 POU3F3P20264 500 aaPredicted RBP13.77□□□□□ -0.21
CCNC-216ENST00000523961 CMA1P23946 247 aa13.77□□□□□ -0.21
CCNC-216ENST00000523961 ABCD1P33897 745 aa13.77□□□□□ -0.21
CCNC-216ENST00000523961 NCKAP1LP55160 1127 aa13.77□□□□□ -0.21
CCNC-216ENST00000523961 AMPD3Q01432 767 aa13.77□□□□□ -0.21
CCNC-216ENST00000523961 GPM6BQ13491 265 aa13.77□□□□□ -0.21
CCNC-216ENST00000523961 NOMO2Q5JPE7 1267 aa13.77□□□□□ -0.21
CCNC-216ENST00000523961 NT5DC1Q5TFE4 455 aa13.77□□□□□ -0.21
CCNC-216ENST00000523961 ATF7IP2Q5U623 682 aa13.77□□□□□ -0.21
CCNC-216ENST00000523961 TAS1R3Q7RTX0 852 aa13.77□□□□□ -0.21
CCNC-216ENST00000523961 HAUS6Q7Z4H7 955 aa13.77□□□□□ -0.21
CCNC-216ENST00000523961 FAM178BQ8IXR5 827 aa13.77□□□□□ -0.21
CCNC-216ENST00000523961 SLC17A8Q8NDX2 589 aa13.77□□□□□ -0.21
CCNC-216ENST00000523961 URGCPQ8TCY9 931 aa13.77□□□□□ -0.21
CCNC-216ENST00000523961 GDPD5Q8WTR4 605 aa13.77□□□□□ -0.21
CCNC-216ENST00000523961 KCNN1Q92952 543 aa13.77□□□□□ -0.21
CCNC-216ENST00000523961 P2RX5Q93086 422 aa13.77□□□□□ -0.21
CCNC-216ENST00000523961 TNMDQ9H2S6 317 aa13.77□□□□□ -0.21
CCNC-216ENST00000523961 MAGEF1Q9HAY2 307 aa13.77□□□□□ -0.21
CCNC-216ENST00000523961 KBTBD4Q9NVX7 518 aa13.77□□□□□ -0.21
CCNC-216ENST00000523961 LMCD1Q9NZU5 365 aa13.77□□□□□ -0.21
CCNC-216ENST00000523961 KCNH3Q9ULD8 1083 aa13.77□□□□□ -0.21
CCNC-216ENST00000523961 TNFSF13BQ9Y275 285 aa13.77□□□□□ -0.21
CCNC-216ENST00000523961 PCDHB12Q9Y5F1 795 aa13.77□□□□□ -0.21
CCNC-216ENST00000523961 FNDC1Q4ZHG4 1894 aaPredicted RBP13.76□□□□□ -0.21
CCNC-216ENST00000523961 LPXNO60711 386 aa13.76□□□□□ -0.21
CCNC-216ENST00000523961 EDN1P05305 212 aa13.76□□□□□ -0.21
CCNC-216ENST00000523961 MAPTP10636 758 aaKnown RBP13.76□□□□□ -0.21
CCNC-216ENST00000523961 GAP43P17677 238 aa13.76□□□□□ -0.21
CCNC-216ENST00000523961 CSPP1Q1MSJ5 1256 aa13.76□□□□□ -0.21
CCNC-216ENST00000523961 DCAF4L1Q3SXM0 396 aa13.76□□□□□ -0.21
CCNC-216ENST00000523961 EEF1DP3Q658K8 133 aa13.76□□□□□ -0.21
CCNC-216ENST00000523961 LRRC55Q6ZSA7 311 aa13.76□□□□□ -0.21
CCNC-216ENST00000523961 DNAJC19Q96DA6 116 aa13.76□□□□□ -0.21
CCNC-216ENST00000523961 ACO2Q99798 780 aaKnown RBP13.76□□□□□ -0.21
CCNC-216ENST00000523961 APOL6Q9BWW8 343 aa13.76□□□□□ -0.21
CCNC-216ENST00000523961 NXF3Q9H4D5 531 aaKnown RBP13.76□□□□□ -0.21
CCNC-216ENST00000523961 CWH43Q9H720 699 aa13.76□□□□□ -0.21
CCNC-216ENST00000523961 KANSL3Q9P2N6 904 aa13.76□□□□□ -0.21
CCNC-216ENST00000523961 SEL1LQ9UBV2 794 aa13.76□□□□□ -0.21
CCNC-216ENST00000523961 INPP5FQ9Y2H2 1132 aa13.76□□□□□ -0.21
CCNC-216ENST00000523961 USP20Q9Y2K6 914 aa13.76□□□□□ -0.21
CCNC-216ENST00000523961 GIT1Q9Y2X7 761 aa13.76□□□□□ -0.21
CCNC-216ENST00000523961 HES2Q9Y543 173 aa13.76□□□□□ -0.21
CCNC-216ENST00000523961 MYH11P35749 1972 aa13.76□□□□□ -0.21
CCNC-216ENST00000523961 ZMYM2Q9UBW7 1377 aa13.75□□□□□ -0.21
CCNC-216ENST00000523961 CARNS1A5YM72 827 aa13.75□□□□□ -0.21
CCNC-216ENST00000523961 K7ENM7 598 aa13.75□□□□□ -0.21
CCNC-216ENST00000523961 IDEP14735 1019 aa13.75□□□□□ -0.21
CCNC-216ENST00000523961 RNASELQ05823 741 aaKnown RBP13.75□□□□□ -0.21
CCNC-216ENST00000523961 PTPROQ16827 1216 aa13.75□□□□□ -0.21
CCNC-216ENST00000523961 ZPBP2Q6X784 338 aa13.75□□□□□ -0.21
CCNC-216ENST00000523961 SFR1Q86XK3 245 aa13.75□□□□□ -0.21
CCNC-216ENST00000523961 COLGALT1Q8NBJ5 622 aa13.75□□□□□ -0.21
CCNC-216ENST00000523961 MAFAQ8NHW3 353 aaPredicted RBP13.75□□□□□ -0.21
CCNC-216ENST00000523961 STAMQ92783 540 aa13.75□□□□□ -0.21
CCNC-216ENST00000523961 TARS2Q9BW92 718 aaKnown RBP13.75□□□□□ -0.21
CCNC-216ENST00000523961 LMAN2LQ9H0V9 348 aa13.75□□□□□ -0.21
CCNC-216ENST00000523961 TBC1D13Q9NVG8 400 aa13.75□□□□□ -0.21
CCNC-216ENST00000523961 HCSTQ9UBK5 93 aa13.75□□□□□ -0.21
CCNC-216ENST00000523961 PARP2Q9UGN5 583 aa13.75□□□□□ -0.21
CCNC-216ENST00000523961 MTCH2Q9Y6C9 303 aa13.75□□□□□ -0.21
CCNC-216ENST00000523961 RALGAPA2Q2PPJ7 1873 aa13.75□□□□□ -0.21
CCNC-216ENST00000523961 CHD7Q9P2D1 2997 aa13.74□□□□□ -0.21
CCNC-216ENST00000523961 NLRC5Q86WI3 1866 aa13.74□□□□□ -0.21
CCNC-216ENST00000523961 A0A1B0GVL5 298 aa13.74□□□□□ -0.21
CCNC-216ENST00000523961 A0A1W2PQ27 194 aa13.74□□□□□ -0.21
CCNC-216ENST00000523961 A0A1W2PQ64 194 aa13.74□□□□□ -0.21
CCNC-216ENST00000523961 A0A1W2PQD8 194 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms