RNA–Protein interactions for RNA: ENST00000523655.1

SREK1-213, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 5

Gene SREK1, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-213	ENST00000523655	SCAPER	Q9BY12	1400 aa		6.14	□□□□□ -1.43
SREK1-213	ENST00000523655	GOLGA8B	A8MQT2	603 aa		6.13	□□□□□ -1.43
SREK1-213	ENST00000523655	H2AFY	O75367	372 aa	Known RBP	6.13	□□□□□ -1.43
SREK1-213	ENST00000523655	PRPF6	O94906	941 aa	Known RBP	6.13	□□□□□ -1.43
SREK1-213	ENST00000523655	ZNF202	O95125	648 aa		6.13	□□□□□ -1.43
SREK1-213	ENST00000523655	CYP17A1	P05093	508 aa		6.13	□□□□□ -1.43
SREK1-213	ENST00000523655	SCNN1G	P51170	649 aa		6.13	□□□□□ -1.43
SREK1-213	ENST00000523655	EVA1C	P58658	441 aa		6.13	□□□□□ -1.43
SREK1-213	ENST00000523655	CACTIN	Q8WUQ7	758 aa	Known RBP	6.13	□□□□□ -1.43
SREK1-213	ENST00000523655	CHAC2	Q8WUX2	184 aa		6.13	□□□□□ -1.43
SREK1-213	ENST00000523655	E2F7	Q96AV8	911 aa		6.13	□□□□□ -1.43
SREK1-213	ENST00000523655	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	6.13	□□□□□ -1.43
SREK1-213	ENST00000523655	SLC6A15	Q9H2J7	730 aa		6.13	□□□□□ -1.43
SREK1-213	ENST00000523655	THG1L	Q9NWX6	298 aa	Known RBP	6.13	□□□□□ -1.43
SREK1-213	ENST00000523655	KCMF1	Q9P0J7	381 aa		6.13	□□□□□ -1.43
SREK1-213	ENST00000523655	NCDN	Q9UBB6	729 aa		6.13	□□□□□ -1.43
SREK1-213	ENST00000523655	VWA7	Q9Y334	891 aa		6.13	□□□□□ -1.43
SREK1-213	ENST00000523655	CNTLN	Q9NXG0	1405 aa		6.13	□□□□□ -1.43
SREK1-213	ENST00000523655	RAPGEF6	Q8TEU7	1601 aa		6.13	□□□□□ -1.43
SREK1-213	ENST00000523655	RNF17	Q9BXT8	1623 aa	Known RBP	6.13	□□□□□ -1.43
SREK1-213	ENST00000523655		A0A087X0B3	334 aa		6.12	□□□□□ -1.43
SREK1-213	ENST00000523655		A0A0A6YYK5	440 aa	Predicted RBP	6.12	□□□□□ -1.43
SREK1-213	ENST00000523655	ELL2	O00472	640 aa	Predicted RBP	6.12	□□□□□ -1.43
SREK1-213	ENST00000523655	PRC1	O43663	620 aa		6.12	□□□□□ -1.43
SREK1-213	ENST00000523655	LRP6	O75581	1613 aa		6.12	□□□□□ -1.43
SREK1-213	ENST00000523655	RFPL3	O75679	317 aa		6.12	□□□□□ -1.43
SREK1-213	ENST00000523655	STC2	O76061	302 aa		6.12	□□□□□ -1.43
SREK1-213	ENST00000523655	CNGA1	P29973	690 aa		6.12	□□□□□ -1.43
SREK1-213	ENST00000523655	FLT3	P36888	993 aa		6.12	□□□□□ -1.43
SREK1-213	ENST00000523655	ADCY2	Q08462	1091 aa		6.12	□□□□□ -1.43
SREK1-213	ENST00000523655	FHL2	Q14192	279 aa		6.12	□□□□□ -1.43
SREK1-213	ENST00000523655	RRP1B	Q14684	758 aa	Known RBP	6.12	□□□□□ -1.43
SREK1-213	ENST00000523655	EPHA7	Q15375	998 aa		6.12	□□□□□ -1.43
SREK1-213	ENST00000523655	SPATA31A6	Q5VVP1	1343 aa		6.12	□□□□□ -1.43
SREK1-213	ENST00000523655	SUPT6H	Q7KZ85	1726 aa	Known RBP	6.12	□□□□□ -1.43
SREK1-213	ENST00000523655	CLEC14A	Q86T13	490 aa		6.12	□□□□□ -1.43
SREK1-213	ENST00000523655	DDX42	Q86XP3	938 aa	Known RBP eCLIP	6.12	□□□□□ -1.43
SREK1-213	ENST00000523655	NIM1K	Q8IY84	436 aa		6.12	□□□□□ -1.43
SREK1-213	ENST00000523655	PMM1	Q92871	262 aa		6.12	□□□□□ -1.43
SREK1-213	ENST00000523655	CCDC136	Q96JN2	1154 aa		6.12	□□□□□ -1.43
SREK1-213	ENST00000523655	WDR92	Q96MX6	357 aa		6.12	□□□□□ -1.43
SREK1-213	ENST00000523655	SOX7	Q9BT81	388 aa		6.12	□□□□□ -1.43
SREK1-213	ENST00000523655	MTG2	Q9H4K7	406 aa		6.12	□□□□□ -1.43
SREK1-213	ENST00000523655	CAAP1	Q9H8G2	361 aa		6.12	□□□□□ -1.43
SREK1-213	ENST00000523655	POLR3B	Q9NW08	1133 aa	Predicted RBP	6.12	□□□□□ -1.43
SREK1-213	ENST00000523655	UGGT2	Q9NYU1	1516 aa		6.12	□□□□□ -1.43
SREK1-213	ENST00000523655	CEP72	Q9P209	647 aa		6.12	□□□□□ -1.43
SREK1-213	ENST00000523655	SPO11	Q9Y5K1	396 aa		6.12	□□□□□ -1.43
SREK1-213	ENST00000523655	BIVM-ERCC5	R4GMW8	1640 aa		6.11	□□□□□ -1.43
SREK1-213	ENST00000523655	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	6.11	□□□□□ -1.43
SREK1-213	ENST00000523655	AFF2	P51816	1311 aa		6.11	□□□□□ -1.43
SREK1-213	ENST00000523655	ALG1L2	C9J202	215 aa		6.11	□□□□□ -1.43
SREK1-213	ENST00000523655	TGM5	O43548	720 aa		6.11	□□□□□ -1.43
SREK1-213	ENST00000523655	TOX4	O94842	621 aa		6.11	□□□□□ -1.43
SREK1-213	ENST00000523655	MYCLP1	P12525	358 aa	Predicted RBP	6.11	□□□□□ -1.43
SREK1-213	ENST00000523655	HHEX	Q03014	270 aa		6.11	□□□□□ -1.43
SREK1-213	ENST00000523655	USP51	Q70EK9	711 aa		6.11	□□□□□ -1.43
SREK1-213	ENST00000523655	KANSL1	Q7Z3B3	1105 aa		6.11	□□□□□ -1.43
SREK1-213	ENST00000523655	SMC5	Q8IY18	1101 aa		6.11	□□□□□ -1.43
SREK1-213	ENST00000523655	FAM9A	Q8IZU1	332 aa	Predicted RBP	6.11	□□□□□ -1.43
SREK1-213	ENST00000523655	PLA2G15	Q8NCC3	412 aa		6.11	□□□□□ -1.43
SREK1-213	ENST00000523655	GFM2	Q969S9	779 aa	Known RBP	6.11	□□□□□ -1.43
SREK1-213	ENST00000523655	MMRN2	Q9H8L6	949 aa		6.11	□□□□□ -1.43
SREK1-213	ENST00000523655	SLC2A4RG	Q9NR83	387 aa		6.11	□□□□□ -1.43
SREK1-213	ENST00000523655	TCEAL9	Q9UHQ7	104 aa		6.11	□□□□□ -1.43
SREK1-213	ENST00000523655	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	6.1	□□□□□ -1.43
SREK1-213	ENST00000523655	SUV39H1	O43463	412 aa		6.1	□□□□□ -1.43
SREK1-213	ENST00000523655	F2	P00734	622 aa		6.1	□□□□□ -1.43
SREK1-213	ENST00000523655	CFB	P00751	764 aa		6.1	□□□□□ -1.43
SREK1-213	ENST00000523655	SLC25A3	Q00325	362 aa		6.1	□□□□□ -1.43
SREK1-213	ENST00000523655	DSG1	Q02413	1049 aa		6.1	□□□□□ -1.43
SREK1-213	ENST00000523655	CRHR2	Q13324	411 aa		6.1	□□□□□ -1.43
SREK1-213	ENST00000523655	SEPT7	Q16181	437 aa	Known RBP	6.1	□□□□□ -1.43
SREK1-213	ENST00000523655	FAM111B	Q6SJ93	734 aa		6.1	□□□□□ -1.43
SREK1-213	ENST00000523655	LRRTM3	Q86VH5	581 aa		6.1	□□□□□ -1.43
SREK1-213	ENST00000523655	RAVER1	Q8IY67	606 aa	Known RBP	6.1	□□□□□ -1.43
SREK1-213	ENST00000523655	ELOA2	Q8IYF1	753 aa	Predicted RBP	6.1	□□□□□ -1.43
SREK1-213	ENST00000523655	AFAP1	Q8N556	730 aa		6.1	□□□□□ -1.43
SREK1-213	ENST00000523655	C7orf31	Q8N865	590 aa		6.1	□□□□□ -1.43
SREK1-213	ENST00000523655	PGBD4	Q96DM1	585 aa		6.1	□□□□□ -1.43
SREK1-213	ENST00000523655	ZNF496	Q96IT1	587 aa	Predicted RBP	6.1	□□□□□ -1.43
SREK1-213	ENST00000523655	GPR101	Q96P66	508 aa	Predicted RBP	6.1	□□□□□ -1.43
SREK1-213	ENST00000523655	IL23A	Q9NPF7	189 aa		6.1	□□□□□ -1.43
SREK1-213	ENST00000523655	ZKSCAN5	Q9Y2L8	839 aa		6.1	□□□□□ -1.43
SREK1-213	ENST00000523655	GIT1	Q9Y2X7	761 aa		6.1	□□□□□ -1.43
SREK1-213	ENST00000523655	NEURL4	Q96JN8	1562 aa		6.1	□□□□□ -1.43
SREK1-213	ENST00000523655		A0A0A6YYJ9	748 aa		6.09	□□□□□ -1.43
SREK1-213	ENST00000523655	PMS2P1	A4D2B8	440 aa		6.09	□□□□□ -1.43
SREK1-213	ENST00000523655	EIF3J	O75822	258 aa	Known RBP	6.09	□□□□□ -1.43
SREK1-213	ENST00000523655	PCDH8	O95206	1070 aa		6.09	□□□□□ -1.43
SREK1-213	ENST00000523655	SOX5	P35711	763 aa		6.09	□□□□□ -1.43
SREK1-213	ENST00000523655	PTTG1IP	P53801	180 aa		6.09	□□□□□ -1.43
SREK1-213	ENST00000523655	ELAVL1	Q15717	326 aa	Known RBP	6.09	□□□□□ -1.43
SREK1-213	ENST00000523655	NFE2	Q16621	373 aa	Predicted RBP	6.09	□□□□□ -1.43
SREK1-213	ENST00000523655	FAM214A	Q32MH5	1076 aa		6.09	□□□□□ -1.43
SREK1-213	ENST00000523655	ZBTB41	Q5SVQ8	909 aa		6.09	□□□□□ -1.43
SREK1-213	ENST00000523655	KRT40	Q6A162	431 aa		6.09	□□□□□ -1.43
SREK1-213	ENST00000523655	BMP8A	Q7Z5Y6	402 aa		6.09	□□□□□ -1.43
SREK1-213	ENST00000523655	DEFB132	Q7Z7B7	95 aa		6.09	□□□□□ -1.43
SREK1-213	ENST00000523655	RNF180	Q86T96	592 aa		6.09	□□□□□ -1.43

Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms