RNA–Protein interactions for RNA: ENST00000523588.1

CPNE3-207, Transcript of copine 3, humanhuman

TSL 2

Gene CPNE3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-207ENST00000523588 NCANO14594 1321 aa7.34□□□□□ -1.23
CPNE3-207ENST00000523588 PRRG2O14669 202 aa7.34□□□□□ -1.23
CPNE3-207ENST00000523588 NRP1O14786 923 aa7.34□□□□□ -1.23
CPNE3-207ENST00000523588 STC2O76061 302 aa7.34□□□□□ -1.23
CPNE3-207ENST00000523588 MCAMP43121 646 aa7.34□□□□□ -1.23
CPNE3-207ENST00000523588 NPEPPSP55786 919 aa7.34□□□□□ -1.23
CPNE3-207ENST00000523588 ADAM17P78536 824 aa7.34□□□□□ -1.23
CPNE3-207ENST00000523588 R3HDM1Q15032 1099 aaKnown RBP7.34□□□□□ -1.23
CPNE3-207ENST00000523588 CLUL1Q15846 466 aa7.34□□□□□ -1.23
CPNE3-207ENST00000523588 MUM1L1Q5H9M0 696 aa7.34□□□□□ -1.23
CPNE3-207ENST00000523588 PRRT2Q7Z6L0 340 aaPredicted RBP7.34□□□□□ -1.23
CPNE3-207ENST00000523588 CHST13Q8NET6 341 aa7.34□□□□□ -1.23
CPNE3-207ENST00000523588 GPR156Q8NFN8 814 aa7.34□□□□□ -1.23
CPNE3-207ENST00000523588 SSH1Q8WYL5 1049 aa7.34□□□□□ -1.23
CPNE3-207ENST00000523588 KRTAP4-9Q9BYQ8 210 aa7.34□□□□□ -1.23
CPNE3-207ENST00000523588 KLC2Q9H0B6 622 aa7.34□□□□□ -1.23
CPNE3-207ENST00000523588 DMRT3Q9NQL9 472 aa7.34□□□□□ -1.23
CPNE3-207ENST00000523588 HMGB1P09429 215 aaKnown RBP7.33□□□□□ -1.24
CPNE3-207ENST00000523588 ZNF20P17024 532 aa7.33□□□□□ -1.24
CPNE3-207ENST00000523588 SELENOPP49908 381 aa7.33□□□□□ -1.24
CPNE3-207ENST00000523588 EXOSC10Q01780 885 aaKnown RBP7.33□□□□□ -1.24
CPNE3-207ENST00000523588 DUSP2Q05923 314 aa7.33□□□□□ -1.24
CPNE3-207ENST00000523588 CDSNQ15517 529 aa7.33□□□□□ -1.24
CPNE3-207ENST00000523588 MST1LQ2TV78 715 aa7.33□□□□□ -1.24
CPNE3-207ENST00000523588 SPTY2D1Q68D10 685 aaPredicted RBP7.33□□□□□ -1.24
CPNE3-207ENST00000523588 ZNF585AQ6P3V2 769 aa7.33□□□□□ -1.24
CPNE3-207ENST00000523588 Q6ZVL8 140 aa7.33□□□□□ -1.24
CPNE3-207ENST00000523588 D2HGDHQ8N465 521 aa7.33□□□□□ -1.24
CPNE3-207ENST00000523588 HOXB13Q92826 284 aaPredicted RBP7.33□□□□□ -1.24
CPNE3-207ENST00000523588 EDAQ92838 391 aa7.33□□□□□ -1.24
CPNE3-207ENST00000523588 MPHOSPH9Q99550 1183 aa7.33□□□□□ -1.24
CPNE3-207ENST00000523588 SMAD5Q99717 465 aaKnown RBP7.33□□□□□ -1.24
CPNE3-207ENST00000523588 SLC13A1Q9BZW2 595 aa7.33□□□□□ -1.24
CPNE3-207ENST00000523588 DEF6Q9H4E7 631 aa7.33□□□□□ -1.24
CPNE3-207ENST00000523588 KLHL33A6NCF5 533 aa7.32□□□□□ -1.24
CPNE3-207ENST00000523588 AKR1B10O60218 316 aa7.32□□□□□ -1.24
CPNE3-207ENST00000523588 ACO1P21399 889 aaKnown RBP7.32□□□□□ -1.24
CPNE3-207ENST00000523588 KRTAP10-2P60368 255 aa7.32□□□□□ -1.24
CPNE3-207ENST00000523588 PTPN21Q16825 1174 aa7.32□□□□□ -1.24
CPNE3-207ENST00000523588 ZNF808Q8N4W9 903 aaPredicted RBP7.32□□□□□ -1.24
CPNE3-207ENST00000523588 OR5M3Q8NGP4 307 aa7.32□□□□□ -1.24
CPNE3-207ENST00000523588 ZNF512Q96ME7 567 aaPredicted RBP7.32□□□□□ -1.24
CPNE3-207ENST00000523588 RBM12Q9NTZ6 932 aaKnown RBP7.32□□□□□ -1.24
CPNE3-207ENST00000523588 HECAQ9UBI9 543 aaPredicted RBP7.32□□□□□ -1.24
CPNE3-207ENST00000523588 TRPS1Q9UHF7 1281 aa7.32□□□□□ -1.24
CPNE3-207ENST00000523588 TUBD1Q9UJT1 453 aa7.32□□□□□ -1.24
CPNE3-207ENST00000523588 SPEF1Q9Y4P9 236 aa7.32□□□□□ -1.24
CPNE3-207ENST00000523588 HOXA3O43365 443 aaPredicted RBP7.31□□□□□ -1.24
CPNE3-207ENST00000523588 PHF2O75151 1096 aa7.31□□□□□ -1.24
CPNE3-207ENST00000523588 ITGA10O75578 1167 aa7.31□□□□□ -1.24
CPNE3-207ENST00000523588 PDGFRBP09619 1106 aa7.31□□□□□ -1.24
CPNE3-207ENST00000523588 GYPEP15421 78 aa7.31□□□□□ -1.24
CPNE3-207ENST00000523588 C5AR1P21730 350 aa7.31□□□□□ -1.24
CPNE3-207ENST00000523588 ADSLP30566 484 aaPredicted RBP7.31□□□□□ -1.24
CPNE3-207ENST00000523588 BUD31P41223 144 aaPredicted RBP7.31□□□□□ -1.24
CPNE3-207ENST00000523588 MRPL49Q13405 166 aaKnown RBP7.31□□□□□ -1.24
CPNE3-207ENST00000523588 ODF1Q14990 250 aa7.31□□□□□ -1.24
CPNE3-207ENST00000523588 HS1BP3Q53T59 392 aa7.31□□□□□ -1.24
CPNE3-207ENST00000523588 FKBP15Q5T1M5 1219 aa7.31□□□□□ -1.24
CPNE3-207ENST00000523588 ZNF480Q8WV37 535 aa7.31□□□□□ -1.24
CPNE3-207ENST00000523588 DVL3Q92997 716 aaPredicted RBP7.31□□□□□ -1.24
CPNE3-207ENST00000523588 BORCS6Q96GS4 357 aa7.31□□□□□ -1.24
CPNE3-207ENST00000523588 GPRC5DQ9NZD1 345 aa7.31□□□□□ -1.24
CPNE3-207ENST00000523588 TCAF1Q9Y4C2 921 aa7.31□□□□□ -1.24
CPNE3-207ENST00000523588 NDUFS2O75306 463 aa7.3□□□□□ -1.24
CPNE3-207ENST00000523588 GASTP01350 101 aa7.3□□□□□ -1.24
CPNE3-207ENST00000523588 GSPT1P15170 499 aaKnown RBP7.3□□□□□ -1.24
CPNE3-207ENST00000523588 GZMKP49863 264 aa7.3□□□□□ -1.24
CPNE3-207ENST00000523588 SEPT2Q15019 361 aa7.3□□□□□ -1.24
CPNE3-207ENST00000523588 ACAP2Q15057 778 aa7.3□□□□□ -1.24
CPNE3-207ENST00000523588 FAM214AQ32MH5 1076 aa7.3□□□□□ -1.24
CPNE3-207ENST00000523588 PPM1NQ8N819 430 aa7.3□□□□□ -1.24
CPNE3-207ENST00000523588 OR2I1PQ8NGU4 316 aa7.3□□□□□ -1.24
CPNE3-207ENST00000523588 ARL8AQ96BM9 186 aa7.3□□□□□ -1.24
CPNE3-207ENST00000523588 IL17RAQ96F46 866 aa7.3□□□□□ -1.24
CPNE3-207ENST00000523588 TEKT5Q96M29 485 aa7.3□□□□□ -1.24
CPNE3-207ENST00000523588 ADOQ96SZ5 270 aa7.3□□□□□ -1.24
CPNE3-207ENST00000523588 ADI1Q9BV57 179 aa7.3□□□□□ -1.24
CPNE3-207ENST00000523588 ADCY6O43306 1168 aa7.29□□□□□ -1.24
CPNE3-207ENST00000523588 XPOTO43592 962 aaKnown RBP7.29□□□□□ -1.24
CPNE3-207ENST00000523588 HSP90B1P14625 803 aaKnown RBP7.29□□□□□ -1.24
CPNE3-207ENST00000523588 CRHR1P34998 444 aa7.29□□□□□ -1.24
CPNE3-207ENST00000523588 MGAT2Q10469 447 aa7.29□□□□□ -1.24
CPNE3-207ENST00000523588 ELAVL1Q15717 326 aaKnown RBP7.29□□□□□ -1.24
CPNE3-207ENST00000523588 FAM89AQ96GI7 184 aa7.29□□□□□ -1.24
CPNE3-207ENST00000523588 BCO1Q9HAY6 547 aa7.29□□□□□ -1.24
CPNE3-207ENST00000523588 ZBTB21Q9ULJ3 1066 aa7.29□□□□□ -1.24
CPNE3-207ENST00000523588 TSC22D4Q9Y3Q8 395 aa7.29□□□□□ -1.24
CPNE3-207ENST00000523588 TESMINQ9Y4I5 508 aa7.29□□□□□ -1.24
CPNE3-207ENST00000523588 MRFAP1Q9Y605 127 aa7.29□□□□□ -1.24
CPNE3-207ENST00000523588 ZMYM3Q14202 1370 aa7.29□□□□□ -1.24
CPNE3-207ENST00000523588 WNT10BO00744 389 aa7.28□□□□□ -1.24
CPNE3-207ENST00000523588 WASP42768 502 aa7.28□□□□□ -1.24
CPNE3-207ENST00000523588 HHEXQ03014 270 aa7.28□□□□□ -1.24
CPNE3-207ENST00000523588 NOMO1Q15155 1222 aa7.28□□□□□ -1.24
CPNE3-207ENST00000523588 MFSD5Q6N075 450 aa7.28□□□□□ -1.24
CPNE3-207ENST00000523588 FAM180AQ6UWF9 173 aa7.28□□□□□ -1.24
CPNE3-207ENST00000523588 PNMA8AQ86V59 439 aaPredicted RBP7.28□□□□□ -1.24
CPNE3-207ENST00000523588 SGMS1Q86VZ5 419 aa7.28□□□□□ -1.24
CPNE3-207ENST00000523588 ELOA2Q8IYF1 753 aaPredicted RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms