RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 ATP11BQ9Y2G3 1177 aa10.21□□□□□ -0.78
SDCBP-212ENST00000523483 B4GALT4O60513 344 aa10.2□□□□□ -0.78
SDCBP-212ENST00000523483 ZNF18P17022 549 aa10.2□□□□□ -0.78
SDCBP-212ENST00000523483 ADSSP30520 456 aa10.2□□□□□ -0.78
SDCBP-212ENST00000523483 COPB1P53618 953 aaKnown RBP10.2□□□□□ -0.78
SDCBP-212ENST00000523483 CEP120Q8N960 986 aa10.2□□□□□ -0.78
SDCBP-212ENST00000523483 RNF19AQ9NV58 838 aa10.2□□□□□ -0.78
SDCBP-212ENST00000523483 TRAF3IP3Q9Y228 551 aa10.2□□□□□ -0.78
SDCBP-212ENST00000523483 PHLPP2Q6ZVD8 1323 aa10.2□□□□□ -0.78
SDCBP-212ENST00000523483 A0A0U1RQG5 324 aaPredicted RBP10.2□□□□□ -0.78
SDCBP-212ENST00000523483 MBLAC1A4D2B0 266 aaPredicted RBP10.2□□□□□ -0.78
SDCBP-212ENST00000523483 DNM1LO00429 736 aa10.2□□□□□ -0.78
SDCBP-212ENST00000523483 SGPL1O95470 568 aa10.2□□□□□ -0.78
SDCBP-212ENST00000523483 KRT13P13646 458 aa10.2□□□□□ -0.78
SDCBP-212ENST00000523483 EIF4BP23588 611 aaKnown RBP10.2□□□□□ -0.78
SDCBP-212ENST00000523483 PSMC2P35998 433 aaKnown RBP10.2□□□□□ -0.78
SDCBP-212ENST00000523483 MBTD1Q05BQ5 628 aa10.2□□□□□ -0.78
SDCBP-212ENST00000523483 EDRF1Q3B7T1 1238 aa10.2□□□□□ -0.78
SDCBP-212ENST00000523483 ZBTB41Q5SVQ8 909 aa10.2□□□□□ -0.78
SDCBP-212ENST00000523483 CDKAL1Q5VV42 579 aa10.2□□□□□ -0.78
SDCBP-212ENST00000523483 EEF1DP3Q658K8 133 aa10.2□□□□□ -0.78
SDCBP-212ENST00000523483 SLC39A4Q6P5W5 647 aa10.2□□□□□ -0.78
SDCBP-212ENST00000523483 PAWRQ96IZ0 340 aaKnown RBP10.2□□□□□ -0.78
SDCBP-212ENST00000523483 PPP1R12CQ9BZL4 782 aa10.2□□□□□ -0.78
SDCBP-212ENST00000523483 AGO2Q9UKV8 859 aaKnown RBP10.2□□□□□ -0.78
SDCBP-212ENST00000523483 SNRNP35Q16560 246 aaKnown RBP10.2□□□□□ -0.78
SDCBP-212ENST00000523483 TWF2Q6IBS0 349 aaKnown RBP10.2□□□□□ -0.78
SDCBP-212ENST00000523483 POP1Q99575 1024 aaKnown RBP10.2□□□□□ -0.78
SDCBP-212ENST00000523483 PRDM5Q9NQX1 630 aaPredicted RBP10.2□□□□□ -0.78
SDCBP-212ENST00000523483 HES2Q9Y543 173 aa10.2□□□□□ -0.78
SDCBP-212ENST00000523483 CBFA2T2O43439 604 aa10.19□□□□□ -0.78
SDCBP-212ENST00000523483 RPS6KA5O75582 802 aa10.19□□□□□ -0.78
SDCBP-212ENST00000523483 ARF4P18085 180 aaPredicted RBP10.19□□□□□ -0.78
SDCBP-212ENST00000523483 EEF1GP26641 437 aaKnown RBP10.19□□□□□ -0.78
SDCBP-212ENST00000523483 COBLL1Q53SF7 1204 aa10.19□□□□□ -0.78
SDCBP-212ENST00000523483 FKBP15Q5T1M5 1219 aa10.19□□□□□ -0.78
SDCBP-212ENST00000523483 CTAGE1Q96RT6 745 aa10.19□□□□□ -0.78
SDCBP-212ENST00000523483 MCOLN1Q9GZU1 580 aa10.19□□□□□ -0.78
SDCBP-212ENST00000523483 PRMT7Q9NVM4 692 aaPredicted RBP10.19□□□□□ -0.78
SDCBP-212ENST00000523483 UBE4BO95155 1302 aa10.19□□□□□ -0.78
SDCBP-212ENST00000523483 ACKR2O00590 384 aa10.19□□□□□ -0.78
SDCBP-212ENST00000523483 TNNI1P19237 187 aa10.19□□□□□ -0.78
SDCBP-212ENST00000523483 MRPS6P82932 125 aaKnown RBP10.19□□□□□ -0.78
SDCBP-212ENST00000523483 GOLGA8FQ08AF8 430 aa10.19□□□□□ -0.78
SDCBP-212ENST00000523483 GOLGA8DPQ0D2H9 430 aa10.19□□□□□ -0.78
SDCBP-212ENST00000523483 SNX17Q15036 470 aa10.19□□□□□ -0.78
SDCBP-212ENST00000523483 FNBP1Q96RU3 617 aa10.19□□□□□ -0.78
SDCBP-212ENST00000523483 ADPGKQ9BRR6 497 aa10.19□□□□□ -0.78
SDCBP-212ENST00000523483 LOXHD1Q8IVV2 1947 aa10.19□□□□□ -0.78
SDCBP-212ENST00000523483 ARVCFO00192 962 aa10.19□□□□□ -0.78
SDCBP-212ENST00000523483 TOM1L1O75674 476 aa10.19□□□□□ -0.78
SDCBP-212ENST00000523483 SFPQP23246 707 aaKnown RBP eCLIP10.19□□□□□ -0.78
SDCBP-212ENST00000523483 TNFSF9P41273 254 aa10.19□□□□□ -0.78
SDCBP-212ENST00000523483 ADAM17P78536 824 aa10.19□□□□□ -0.78
SDCBP-212ENST00000523483 PKN2Q16513 984 aaKnown RBP10.19□□□□□ -0.78
SDCBP-212ENST00000523483 SERINC5Q86VE9 423 aa10.19□□□□□ -0.78
SDCBP-212ENST00000523483 TRIM44Q96DX7 344 aaPredicted RBP10.19□□□□□ -0.78
SDCBP-212ENST00000523483 CEP63Q96MT8 703 aa10.19□□□□□ -0.78
SDCBP-212ENST00000523483 STRA6Q9BX79 667 aa10.19□□□□□ -0.78
SDCBP-212ENST00000523483 CELF4Q9BZC1 486 aaKnown RBP10.19□□□□□ -0.78
SDCBP-212ENST00000523483 ST6GALNAC4Q9H4F1 302 aa10.19□□□□□ -0.78
SDCBP-212ENST00000523483 FAM207AQ9NSI2 230 aaPredicted RBP10.19□□□□□ -0.78
SDCBP-212ENST00000523483 ARID2Q68CP9 1835 aa10.18□□□□□ -0.78
SDCBP-212ENST00000523483 GPR32O75388 356 aa10.18□□□□□ -0.78
SDCBP-212ENST00000523483 DARSP14868 501 aaKnown RBP10.18□□□□□ -0.78
SDCBP-212ENST00000523483 GCLMP48507 274 aa10.18□□□□□ -0.78
SDCBP-212ENST00000523483 NOLC1Q14978 699 aaKnown RBP eCLIP10.18□□□□□ -0.78
SDCBP-212ENST00000523483 ZNF410Q86VK4 478 aa10.18□□□□□ -0.78
SDCBP-212ENST00000523483 GPD1LQ8N335 351 aa10.18□□□□□ -0.78
SDCBP-212ENST00000523483 LINC01465Q8N7H1 131 aa10.18□□□□□ -0.78
SDCBP-212ENST00000523483 ELMO3Q96BJ8 720 aa10.18□□□□□ -0.78
SDCBP-212ENST00000523483 HVCN1Q96D96 273 aa10.18□□□□□ -0.78
SDCBP-212ENST00000523483 ACO2Q99798 780 aaKnown RBP10.18□□□□□ -0.78
SDCBP-212ENST00000523483 TSEN34Q9BSV6 310 aaKnown RBP10.18□□□□□ -0.78
SDCBP-212ENST00000523483 NDST4Q9H3R1 872 aa10.18□□□□□ -0.78
SDCBP-212ENST00000523483 ADRB2P07550 413 aa10.18□□□□□ -0.78
SDCBP-212ENST00000523483 CCL23P55773 120 aa10.18□□□□□ -0.78
SDCBP-212ENST00000523483 DLG4P78352 724 aa10.18□□□□□ -0.78
SDCBP-212ENST00000523483 ZNF618Q5T7W0 954 aa10.18□□□□□ -0.78
SDCBP-212ENST00000523483 CDCA2Q69YH5 1023 aaPredicted RBP10.18□□□□□ -0.78
SDCBP-212ENST00000523483 OSBPL7Q9BZF2 842 aa10.18□□□□□ -0.78
SDCBP-212ENST00000523483 TMEM134Q9H6X4 195 aa10.18□□□□□ -0.78
SDCBP-212ENST00000523483 PDE11AQ9HCR9 933 aa10.18□□□□□ -0.78
SDCBP-212ENST00000523483 TOPORSQ9NS56 1045 aaPredicted RBP10.18□□□□□ -0.78
SDCBP-212ENST00000523483 RBAKQ9NYW8 714 aaPredicted RBP10.18□□□□□ -0.78
SDCBP-212ENST00000523483 OGDHLQ9ULD0 1010 aa10.18□□□□□ -0.78
SDCBP-212ENST00000523483 NOC2LQ9Y3T9 749 aaKnown RBP10.18□□□□□ -0.78
SDCBP-212ENST00000523483 ZNF233A6NK53 670 aa10.18□□□□□ -0.78
SDCBP-212ENST00000523483 NPTXRO95502 500 aa10.18□□□□□ -0.78
SDCBP-212ENST00000523483 GNA14O95837 355 aa10.18□□□□□ -0.78
SDCBP-212ENST00000523483 CD52P31358 61 aa10.18□□□□□ -0.78
SDCBP-212ENST00000523483 KLK7P49862 253 aa10.18□□□□□ -0.78
SDCBP-212ENST00000523483 KCNH2Q12809 1159 aa10.18□□□□□ -0.78
SDCBP-212ENST00000523483 LRMPQ12912 555 aa10.18□□□□□ -0.78
SDCBP-212ENST00000523483 BIRC3Q13489 604 aa10.18□□□□□ -0.78
SDCBP-212ENST00000523483 SYCP1Q15431 976 aa10.18□□□□□ -0.78
SDCBP-212ENST00000523483 MAN2A1Q16706 1144 aa10.18□□□□□ -0.78
SDCBP-212ENST00000523483 TRIM60Q495X7 471 aa10.18□□□□□ -0.78
SDCBP-212ENST00000523483 SLFN12LQ6IEE8 588 aa10.18□□□□□ -0.78
SDCBP-212ENST00000523483 ZNF830Q96NB3 372 aaPredicted RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms