RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 SFI1A8K8P3 1242 aa7.52□□□□□ -1.21
CSMD1-211ENST00000523062 K7ENM7 598 aa7.52□□□□□ -1.21
CSMD1-211ENST00000523062 BACH1O14867 736 aa7.52□□□□□ -1.21
CSMD1-211ENST00000523062 AP1G2O75843 785 aa7.52□□□□□ -1.21
CSMD1-211ENST00000523062 NR3C1P04150 777 aa7.52□□□□□ -1.21
CSMD1-211ENST00000523062 CCDC175P0C221 793 aa7.52□□□□□ -1.21
CSMD1-211ENST00000523062 EPB41P11171 864 aaKnown RBP7.52□□□□□ -1.21
CSMD1-211ENST00000523062 PLS3P13797 630 aa7.52□□□□□ -1.21
CSMD1-211ENST00000523062 ERCC3P19447 782 aa7.52□□□□□ -1.21
CSMD1-211ENST00000523062 EDNRBP24530 442 aa7.52□□□□□ -1.21
CSMD1-211ENST00000523062 YY1P25490 414 aa7.52□□□□□ -1.21
CSMD1-211ENST00000523062 NMT1P30419 496 aaKnown RBP7.52□□□□□ -1.21
CSMD1-211ENST00000523062 HOXD13P35453 343 aa7.52□□□□□ -1.21
CSMD1-211ENST00000523062 FKBP1BP68106 108 aa7.52□□□□□ -1.21
CSMD1-211ENST00000523062 ZBED6P86452 979 aa7.52□□□□□ -1.21
CSMD1-211ENST00000523062 CNTN2Q02246 1040 aa7.52□□□□□ -1.21
CSMD1-211ENST00000523062 XKR9Q5GH70 373 aa7.52□□□□□ -1.21
CSMD1-211ENST00000523062 MIS18BP1Q6P0N0 1132 aa7.52□□□□□ -1.21
CSMD1-211ENST00000523062 RAD9BQ6WBX8 426 aa7.52□□□□□ -1.21
CSMD1-211ENST00000523062 TOGARAM2Q6ZUX3 1019 aa7.52□□□□□ -1.21
CSMD1-211ENST00000523062 OTUD6AQ7L8S5 288 aa7.52□□□□□ -1.21
CSMD1-211ENST00000523062 HS2ST1Q7LGA3 356 aa7.52□□□□□ -1.21
CSMD1-211ENST00000523062 ZNF720Q7Z2F6 126 aa7.52□□□□□ -1.21
CSMD1-211ENST00000523062 FRMD5Q7Z6J6 570 aa7.52□□□□□ -1.21
CSMD1-211ENST00000523062 TRIM59Q8IWR1 403 aa7.52□□□□□ -1.21
CSMD1-211ENST00000523062 REXO1L1PQ8IX06 675 aa7.52□□□□□ -1.21
CSMD1-211ENST00000523062 DAW1Q8N136 415 aa7.52□□□□□ -1.21
CSMD1-211ENST00000523062 SLC17A8Q8NDX2 589 aa7.52□□□□□ -1.21
CSMD1-211ENST00000523062 SHCBP1Q8NEM2 672 aa7.52□□□□□ -1.21
CSMD1-211ENST00000523062 ZNF397Q8NF99 534 aaPredicted RBP7.52□□□□□ -1.21
CSMD1-211ENST00000523062 DRC1Q96MC2 740 aa7.52□□□□□ -1.21
CSMD1-211ENST00000523062 FIZ1Q96SL8 496 aa7.52□□□□□ -1.21
CSMD1-211ENST00000523062 EDEM3Q9BZQ6 932 aa7.52□□□□□ -1.21
CSMD1-211ENST00000523062 METTL14Q9HCE5 456 aaKnown RBP7.52□□□□□ -1.21
CSMD1-211ENST00000523062 LARSQ9P2J5 1176 aaKnown RBP7.52□□□□□ -1.21
CSMD1-211ENST00000523062 ARMCX3Q9UH62 379 aaPredicted RBP7.52□□□□□ -1.21
CSMD1-211ENST00000523062 SIK3Q9Y2K2 1263 aa7.52□□□□□ -1.21
CSMD1-211ENST00000523062 PAXBP1Q9Y5B6 917 aa7.52□□□□□ -1.21
CSMD1-211ENST00000523062 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.52□□□□□ -1.21
CSMD1-211ENST00000523062 HRH3Q9Y5N1 445 aa7.52□□□□□ -1.21
CSMD1-211ENST00000523062 GOLGB1Q14789 3259 aaKnown RBP7.52□□□□□ -1.21
CSMD1-211ENST00000523062 IGSF9BQ9UPX0 1349 aa7.52□□□□□ -1.21
CSMD1-211ENST00000523062 LCTP09848 1927 aa7.51□□□□□ -1.21
CSMD1-211ENST00000523062 UQCRHLA0A096LP55 91 aa7.51□□□□□ -1.21
CSMD1-211ENST00000523062 HYAL3O43820 417 aaPredicted RBP7.51□□□□□ -1.21
CSMD1-211ENST00000523062 UQCRHP07919 91 aa7.51□□□□□ -1.21
CSMD1-211ENST00000523062 SUPT20HL2P0C7V6 817 aa7.51□□□□□ -1.21
CSMD1-211ENST00000523062 CETPP11597 493 aa7.51□□□□□ -1.21
CSMD1-211ENST00000523062 ADH6P28332 368 aa7.51□□□□□ -1.21
CSMD1-211ENST00000523062 MSX1P28360 303 aa7.51□□□□□ -1.21
CSMD1-211ENST00000523062 ACTR2P61160 394 aa7.51□□□□□ -1.21
CSMD1-211ENST00000523062 ERVK-24P63145 666 aa7.51□□□□□ -1.21
CSMD1-211ENST00000523062 MYBPC2Q14324 1141 aa7.51□□□□□ -1.21
CSMD1-211ENST00000523062 KCTD2Q14681 263 aa7.51□□□□□ -1.21
CSMD1-211ENST00000523062 SKIV2LQ15477 1246 aaKnown RBP7.51□□□□□ -1.21
CSMD1-211ENST00000523062 MEA1Q16626 185 aa7.51□□□□□ -1.21
CSMD1-211ENST00000523062 PRRT3Q5FWE3 981 aa7.51□□□□□ -1.21
CSMD1-211ENST00000523062 PLA2G4FQ68DD2 849 aa7.51□□□□□ -1.21
CSMD1-211ENST00000523062 FAM133AQ8N9E0 248 aa7.51□□□□□ -1.21
CSMD1-211ENST00000523062 MYRIPQ8NFW9 859 aa7.51□□□□□ -1.21
CSMD1-211ENST00000523062 NEK11Q8NG66 645 aa7.51□□□□□ -1.21
CSMD1-211ENST00000523062 KIF18AQ8NI77 898 aa7.51□□□□□ -1.21
CSMD1-211ENST00000523062 HVCN1Q96D96 273 aa7.51□□□□□ -1.21
CSMD1-211ENST00000523062 MMP19Q99542 508 aa7.51□□□□□ -1.21
CSMD1-211ENST00000523062 MKNK1Q9BUB5 465 aa7.51□□□□□ -1.21
CSMD1-211ENST00000523062 STRA6Q9BX79 667 aa7.51□□□□□ -1.21
CSMD1-211ENST00000523062 GBP3Q9H0R5 595 aa7.51□□□□□ -1.21
CSMD1-211ENST00000523062 ST6GALNAC4Q9H4F1 302 aa7.51□□□□□ -1.21
CSMD1-211ENST00000523062 MROH8Q9H579 483 aa7.51□□□□□ -1.21
CSMD1-211ENST00000523062 TMEM206Q9H813 350 aa7.51□□□□□ -1.21
CSMD1-211ENST00000523062 ZNF408Q9H9D4 720 aa7.51□□□□□ -1.21
CSMD1-211ENST00000523062 CGNQ9P2M7 1197 aaKnown RBP7.51□□□□□ -1.21
CSMD1-211ENST00000523062 GABBR1Q9UBS5 961 aa7.51□□□□□ -1.21
CSMD1-211ENST00000523062 KLF15Q9UIH9 416 aa7.51□□□□□ -1.21
CSMD1-211ENST00000523062 SLC45A1Q9Y2W3 748 aa7.51□□□□□ -1.21
CSMD1-211ENST00000523062 PHLPP2Q6ZVD8 1323 aa7.51□□□□□ -1.21
CSMD1-211ENST00000523062 LOC102724159A0A0B4J2E5 919 aa7.5□□□□□ -1.21
CSMD1-211ENST00000523062 NKRFO15226 690 aaKnown RBP eCLIP7.5□□□□□ -1.21
CSMD1-211ENST00000523062 CLIC2O15247 247 aa7.5□□□□□ -1.21
CSMD1-211ENST00000523062 TGFB1I1O43294 461 aa7.5□□□□□ -1.21
CSMD1-211ENST00000523062 PEX10O60683 326 aa7.5□□□□□ -1.21
CSMD1-211ENST00000523062 IL2RAP01589 272 aa7.5□□□□□ -1.21
CSMD1-211ENST00000523062 AFPP02771 609 aaKnown RBP7.5□□□□□ -1.21
CSMD1-211ENST00000523062 XRCC5P13010 732 aaKnown RBP7.5□□□□□ -1.21
CSMD1-211ENST00000523062 UBA1P22314 1058 aaKnown RBP7.5□□□□□ -1.21
CSMD1-211ENST00000523062 HNRNPH3P31942 346 aaKnown RBP7.5□□□□□ -1.21
CSMD1-211ENST00000523062 CYLC1P35663 651 aaPredicted RBP7.5□□□□□ -1.21
CSMD1-211ENST00000523062 PSMC2P35998 433 aaKnown RBP7.5□□□□□ -1.21
CSMD1-211ENST00000523062 KLK7P49862 253 aa7.5□□□□□ -1.21
CSMD1-211ENST00000523062 GTF2A2P52657 109 aa7.5□□□□□ -1.21
CSMD1-211ENST00000523062 NCKAP1LP55160 1127 aa7.5□□□□□ -1.21
CSMD1-211ENST00000523062 SNRPFP62306 86 aaKnown RBP7.5□□□□□ -1.21
CSMD1-211ENST00000523062 ETF1P62495 437 aaKnown RBP7.5□□□□□ -1.21
CSMD1-211ENST00000523062 CCNA1P78396 465 aa7.5□□□□□ -1.21
CSMD1-211ENST00000523062 CDK17Q00537 523 aa7.5□□□□□ -1.21
CSMD1-211ENST00000523062 PRKCEQ02156 737 aa7.5□□□□□ -1.21
CSMD1-211ENST00000523062 SP4Q02446 784 aa7.5□□□□□ -1.21
CSMD1-211ENST00000523062 NEDD9Q14511 834 aa7.5□□□□□ -1.21
CSMD1-211ENST00000523062 MTF1Q14872 753 aa7.5□□□□□ -1.21
CSMD1-211ENST00000523062 PWP2Q15269 919 aaKnown RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms