RNA–Protein interactions for RNA: ENST00000522905.1

MCPH1-207, Transcript of microcephalin 1, humanhuman

TSL 2 BASIC

Gene MCPH1, Length 2,049 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-207ENST00000522905 TLR2O60603 784 aa12.52□□□□□ -0.4
MCPH1-207ENST00000522905 S100A1P23297 94 aa12.52□□□□□ -0.4
MCPH1-207ENST00000522905 TARSP26639 723 aaKnown RBP12.52□□□□□ -0.4
MCPH1-207ENST00000522905 FKBP3Q00688 224 aaKnown RBP12.52□□□□□ -0.4
MCPH1-207ENST00000522905 GSTM4Q03013 218 aa12.52□□□□□ -0.4
MCPH1-207ENST00000522905 BCL2A1Q16548 175 aa12.52□□□□□ -0.4
MCPH1-207ENST00000522905 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.52□□□□□ -0.4
MCPH1-207ENST00000522905 NET1Q7Z628 596 aaPredicted RBP12.52□□□□□ -0.4
MCPH1-207ENST00000522905 RELL1Q8IUW5 271 aa12.52□□□□□ -0.4
MCPH1-207ENST00000522905 SCUBE1Q8IWY4 988 aa12.52□□□□□ -0.4
MCPH1-207ENST00000522905 BBS5Q8N3I7 341 aa12.52□□□□□ -0.4
MCPH1-207ENST00000522905 SAMD3Q8N6K7 520 aa12.52□□□□□ -0.4
MCPH1-207ENST00000522905 SPIRE2Q8WWL2 714 aa12.52□□□□□ -0.4
MCPH1-207ENST00000522905 MCUR1Q96AQ8 359 aa12.52□□□□□ -0.4
MCPH1-207ENST00000522905 BTBD9Q96Q07 612 aa12.52□□□□□ -0.4
MCPH1-207ENST00000522905 FOXP3Q9BZS1 431 aa12.52□□□□□ -0.4
MCPH1-207ENST00000522905 CCDC113Q9H0I3 377 aa12.52□□□□□ -0.4
MCPH1-207ENST00000522905 SEMA4AQ9H3S1 761 aa12.52□□□□□ -0.4
MCPH1-207ENST00000522905 GRHL1Q9NZI5 618 aa12.52□□□□□ -0.4
MCPH1-207ENST00000522905 WHRNQ9P202 907 aa12.52□□□□□ -0.4
MCPH1-207ENST00000522905 ADAMTS1Q9UHI8 967 aa12.52□□□□□ -0.4
MCPH1-207ENST00000522905 CROTQ9UKG9 612 aa12.52□□□□□ -0.4
MCPH1-207ENST00000522905 HTR3EA5X5Y0 456 aa12.52□□□□□ -0.41
MCPH1-207ENST00000522905 GSC2O15499 205 aa12.52□□□□□ -0.41
MCPH1-207ENST00000522905 PRPF4O43172 522 aaKnown RBP eCLIP12.52□□□□□ -0.41
MCPH1-207ENST00000522905 KCNQ3O43525 872 aa12.52□□□□□ -0.41
MCPH1-207ENST00000522905 DDAH1O94760 285 aa12.52□□□□□ -0.41
MCPH1-207ENST00000522905 FGGP02679 453 aa12.52□□□□□ -0.41
MCPH1-207ENST00000522905 ALDH2P05091 517 aa12.52□□□□□ -0.41
MCPH1-207ENST00000522905 H2AFZP0C0S5 128 aa12.52□□□□□ -0.41
MCPH1-207ENST00000522905 HADHBP55084 474 aaKnown RBP12.52□□□□□ -0.41
MCPH1-207ENST00000522905 RNASE9P60153 205 aaKnown RBP12.52□□□□□ -0.41
MCPH1-207ENST00000522905 FUT2Q10981 343 aa12.52□□□□□ -0.41
MCPH1-207ENST00000522905 CALCOCO2Q13137 446 aa12.52□□□□□ -0.41
MCPH1-207ENST00000522905 SPARCL1Q14515 664 aa12.52□□□□□ -0.41
MCPH1-207ENST00000522905 CGB2Q6NT52 195 aa12.52□□□□□ -0.41
MCPH1-207ENST00000522905 C1orf228Q6PIY5 440 aa12.52□□□□□ -0.41
MCPH1-207ENST00000522905 H2AFVQ71UI9 128 aa12.52□□□□□ -0.41
MCPH1-207ENST00000522905 PLBD2Q8NHP8 589 aa12.52□□□□□ -0.41
MCPH1-207ENST00000522905 DDI1Q8WTU0 396 aa12.52□□□□□ -0.41
MCPH1-207ENST00000522905 SCFD1Q8WVM8 642 aa12.52□□□□□ -0.41
MCPH1-207ENST00000522905 NRG4Q8WWG1 115 aa12.52□□□□□ -0.41
MCPH1-207ENST00000522905 IP6K1Q92551 441 aa12.52□□□□□ -0.41
MCPH1-207ENST00000522905 ABHD8Q96I13 439 aa12.52□□□□□ -0.41
MCPH1-207ENST00000522905 MPP4Q96JB8 637 aa12.52□□□□□ -0.41
MCPH1-207ENST00000522905 FNBP1Q96RU3 617 aa12.52□□□□□ -0.41
MCPH1-207ENST00000522905 STRBPQ96SI9 672 aaKnown RBP12.52□□□□□ -0.41
MCPH1-207ENST00000522905 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.52□□□□□ -0.41
MCPH1-207ENST00000522905 NAPBQ9H115 298 aa12.52□□□□□ -0.41
MCPH1-207ENST00000522905 KRT82Q9NSB4 513 aa12.52□□□□□ -0.41
MCPH1-207ENST00000522905 GGT7Q9UJ14 662 aa12.52□□□□□ -0.41
MCPH1-207ENST00000522905 ZFP69BQ9UJL9 534 aa12.52□□□□□ -0.41
MCPH1-207ENST00000522905 NAGPAQ9UK23 515 aa12.52□□□□□ -0.41
MCPH1-207ENST00000522905 HDAC9Q9UKV0 1011 aa12.52□□□□□ -0.41
MCPH1-207ENST00000522905 DMTF1Q9Y222 760 aa12.52□□□□□ -0.41
MCPH1-207ENST00000522905 ADAMTS7Q9UKP4 1686 aa12.51□□□□□ -0.41
MCPH1-207ENST00000522905 EIF4E1BA6NMX2 242 aaKnown RBP12.51□□□□□ -0.41
MCPH1-207ENST00000522905 GYG2O15488 501 aa12.51□□□□□ -0.41
MCPH1-207ENST00000522905 TPD52L2O43399 206 aaKnown RBP12.51□□□□□ -0.41
MCPH1-207ENST00000522905 ZNF862O60290 1169 aa12.51□□□□□ -0.41
MCPH1-207ENST00000522905 MYBL1P10243 752 aa12.51□□□□□ -0.41
MCPH1-207ENST00000522905 MAN1A1P33908 653 aa12.51□□□□□ -0.41
MCPH1-207ENST00000522905 TXKP42681 527 aa12.51□□□□□ -0.41
MCPH1-207ENST00000522905 STAT4Q14765 748 aa12.51□□□□□ -0.41
MCPH1-207ENST00000522905 RASA2Q15283 850 aa12.51□□□□□ -0.41
MCPH1-207ENST00000522905 PDK4Q16654 411 aa12.51□□□□□ -0.41
MCPH1-207ENST00000522905 RC3H1Q5TC82 1133 aaKnown RBP12.51□□□□□ -0.41
MCPH1-207ENST00000522905 SOGA3Q5TF21 947 aa12.51□□□□□ -0.41
MCPH1-207ENST00000522905 PCNX4Q63HM2 1172 aa12.51□□□□□ -0.41
MCPH1-207ENST00000522905 ZNF530Q6P9A1 599 aaPredicted RBP12.51□□□□□ -0.41
MCPH1-207ENST00000522905 COPS6Q7L5N1 327 aa12.51□□□□□ -0.41
MCPH1-207ENST00000522905 SFR1Q86XK3 245 aa12.51□□□□□ -0.41
MCPH1-207ENST00000522905 TTC8Q8TAM2 541 aa12.51□□□□□ -0.41
MCPH1-207ENST00000522905 EPS8L3Q8TE67 593 aaKnown RBP12.51□□□□□ -0.41
MCPH1-207ENST00000522905 TRPC4APQ8TEL6 797 aa12.51□□□□□ -0.41
MCPH1-207ENST00000522905 XAGE3Q8WTP9 111 aa12.51□□□□□ -0.41
MCPH1-207ENST00000522905 SNX27Q96L92 541 aa12.51□□□□□ -0.41
MCPH1-207ENST00000522905 SSU72Q9NP77 194 aaKnown RBP12.51□□□□□ -0.41
MCPH1-207ENST00000522905 KCNK9Q9NPC2 374 aa12.51□□□□□ -0.41
MCPH1-207ENST00000522905 ETNK2Q9NVF9 386 aa12.51□□□□□ -0.41
MCPH1-207ENST00000522905 STK17AQ9UEE5 414 aa12.51□□□□□ -0.41
MCPH1-207ENST00000522905 ARMCX3Q9UH62 379 aaPredicted RBP12.51□□□□□ -0.41
MCPH1-207ENST00000522905 PHTF1Q9UMS5 762 aa12.51□□□□□ -0.41
MCPH1-207ENST00000522905 NENFQ9UMX5 172 aa12.51□□□□□ -0.41
MCPH1-207ENST00000522905 COL4A3BPQ9Y5P4 624 aa12.51□□□□□ -0.41
MCPH1-207ENST00000522905 MYH2Q9UKX2 1941 aa12.51□□□□□ -0.41
MCPH1-207ENST00000522905 TMEM2Q9UHN6 1383 aa12.51□□□□□ -0.41
MCPH1-207ENST00000522905 LAMB4A4D0S4 1761 aa12.51□□□□□ -0.41
MCPH1-207ENST00000522905 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.5□□□□□ -0.41
MCPH1-207ENST00000522905 EDF1O60869 148 aaKnown RBP12.5□□□□□ -0.41
MCPH1-207ENST00000522905 CYP1A1P04798 512 aaPredicted RBP12.5□□□□□ -0.41
MCPH1-207ENST00000522905 ALOX15P16050 662 aaPredicted RBP12.5□□□□□ -0.41
MCPH1-207ENST00000522905 GEMIN4P57678 1058 aaKnown RBP12.5□□□□□ -0.41
MCPH1-207ENST00000522905 TCEAL1Q15170 157 aa12.5□□□□□ -0.41
MCPH1-207ENST00000522905 NPY5RQ15761 445 aa12.5□□□□□ -0.41
MCPH1-207ENST00000522905 IL17AQ16552 155 aa12.5□□□□□ -0.41
MCPH1-207ENST00000522905 CYP1B1Q16678 543 aa12.5□□□□□ -0.41
MCPH1-207ENST00000522905 ACSBG2Q5FVE4 666 aa12.5□□□□□ -0.41
MCPH1-207ENST00000522905 TMCO4Q5TGY1 634 aa12.5□□□□□ -0.41
MCPH1-207ENST00000522905 MEX3CQ5U5Q3 659 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms