RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 APOL6Q9BWW8 343 aa20.7■□□□□ 0.9
SPIDR-220ENST00000522900 NXF3Q9H4D5 531 aaKnown RBP20.7■□□□□ 0.9
SPIDR-220ENST00000522900 PRKAG3Q9UGI9 489 aa20.7■□□□□ 0.9
SPIDR-220ENST00000522900 SMC3Q9UQE7 1217 aa20.7■□□□□ 0.9
SPIDR-220ENST00000522900 A0A1B0GUA9 196 aa20.69■□□□□ 0.9
SPIDR-220ENST00000522900 ARL5CA6NH57 179 aa20.69■□□□□ 0.9
SPIDR-220ENST00000522900 E9PMD0 336 aa20.69■□□□□ 0.9
SPIDR-220ENST00000522900 PI4K2BG5E9Z4 385 aa20.69■□□□□ 0.9
SPIDR-220ENST00000522900 NPTXRO95502 500 aa20.69■□□□□ 0.9
SPIDR-220ENST00000522900 AKAP5P24588 427 aa20.69■□□□□ 0.9
SPIDR-220ENST00000522900 MLH1P40692 756 aa20.69■□□□□ 0.9
SPIDR-220ENST00000522900 PRPHP41219 470 aa20.69■□□□□ 0.9
SPIDR-220ENST00000522900 RILPL1Q5EBL4 403 aa20.69■□□□□ 0.9
SPIDR-220ENST00000522900 TMEM184AQ6ZMB5 413 aa20.69■□□□□ 0.9
SPIDR-220ENST00000522900 DTHD1Q6ZMT9 781 aa20.69■□□□□ 0.9
SPIDR-220ENST00000522900 ZFP42Q96MM3 310 aa20.69■□□□□ 0.9
SPIDR-220ENST00000522900 ZBP1Q9H171 429 aa20.69■□□□□ 0.9
SPIDR-220ENST00000522900 FZD8Q9H461 694 aa20.69■□□□□ 0.9
SPIDR-220ENST00000522900 UBN1Q9NPG3 1134 aa20.69■□□□□ 0.9
SPIDR-220ENST00000522900 KANSL3Q9P2N6 904 aa20.69■□□□□ 0.9
SPIDR-220ENST00000522900 LAD1O00515 517 aa20.68■□□□□ 0.9
SPIDR-220ENST00000522900 CLASP2O75122 1294 aaKnown RBP20.68■□□□□ 0.9
SPIDR-220ENST00000522900 ALDH2P05091 517 aa20.68■□□□□ 0.9
SPIDR-220ENST00000522900 EDN1P05305 212 aa20.68■□□□□ 0.9
SPIDR-220ENST00000522900 CA8P35219 290 aa20.68■□□□□ 0.9
SPIDR-220ENST00000522900 LARP1BQ659C4 914 aaKnown RBP20.68■□□□□ 0.9
SPIDR-220ENST00000522900 SLC27A1Q6PCB7 646 aa20.68■□□□□ 0.9
SPIDR-220ENST00000522900 PPP4R3CPQ6ZMV5 832 aa20.68■□□□□ 0.9
SPIDR-220ENST00000522900 KCNK18Q7Z418 384 aa20.68■□□□□ 0.9
SPIDR-220ENST00000522900 FAM193BQ96PV7 902 aaPredicted RBP20.68■□□□□ 0.9
SPIDR-220ENST00000522900 APOL5Q9BWW9 433 aa20.68■□□□□ 0.9
SPIDR-220ENST00000522900 PRMT7Q9NVM4 692 aaPredicted RBP20.68■□□□□ 0.9
SPIDR-220ENST00000522900 USP15Q9Y4E8 981 aaPredicted RBP20.68■□□□□ 0.9
SPIDR-220ENST00000522900 NCOR1O75376 2440 aa20.68■□□□□ 0.9
SPIDR-220ENST00000522900 NRP1O14786 923 aa20.67■□□□□ 0.9
SPIDR-220ENST00000522900 INPPL1O15357 1258 aa20.67■□□□□ 0.9
SPIDR-220ENST00000522900 SCNN1GP51170 649 aa20.67■□□□□ 0.9
SPIDR-220ENST00000522900 ATP2C1P98194 919 aaPredicted RBP20.67■□□□□ 0.9
SPIDR-220ENST00000522900 KRT79Q5XKE5 535 aa20.67■□□□□ 0.9
SPIDR-220ENST00000522900 ANKRD54Q6NXT1 300 aa20.67■□□□□ 0.9
SPIDR-220ENST00000522900 SYCE2Q6PIF2 218 aa20.67■□□□□ 0.9
SPIDR-220ENST00000522900 ZBTB8OSQ8IWT0 167 aa20.67■□□□□ 0.9
SPIDR-220ENST00000522900 COLGALT2Q8IYK4 626 aa20.67■□□□□ 0.9
SPIDR-220ENST00000522900 GSTCDQ8NEC7 633 aa20.67■□□□□ 0.9
SPIDR-220ENST00000522900 DEPTORQ8TB45 409 aa20.67■□□□□ 0.9
SPIDR-220ENST00000522900 KIFC3Q9BVG8 833 aa20.67■□□□□ 0.9
SPIDR-220ENST00000522900 C1QTNF1Q9BXJ1 281 aa20.67■□□□□ 0.9
SPIDR-220ENST00000522900 RAB34Q9BZG1 259 aa20.67■□□□□ 0.9
SPIDR-220ENST00000522900 TRIM6Q9C030 488 aaPredicted RBP20.67■□□□□ 0.9
SPIDR-220ENST00000522900 S1PR5Q9H228 398 aa20.67■□□□□ 0.9
SPIDR-220ENST00000522900 C11orf16Q9NQ32 467 aa20.67■□□□□ 0.9
SPIDR-220ENST00000522900 KLK14Q9P0G3 267 aa20.67■□□□□ 0.9
SPIDR-220ENST00000522900 RAPGEFL1Q9UHV5 662 aa20.67■□□□□ 0.9
SPIDR-220ENST00000522900 FAN1Q9Y2M0 1017 aa20.67■□□□□ 0.9
SPIDR-220ENST00000522900 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.67■□□□□ 0.9
SPIDR-220ENST00000522900 C5orf42Q9H799 3197 aa20.67■□□□□ 0.9
SPIDR-220ENST00000522900 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.66■□□□□ 0.9
SPIDR-220ENST00000522900 CTSAP10619 480 aa20.66■□□□□ 0.9
SPIDR-220ENST00000522900 LIG1P18858 919 aa20.66■□□□□ 0.9
SPIDR-220ENST00000522900 NAMPTP43490 491 aa20.66■□□□□ 0.9
SPIDR-220ENST00000522900 FAM187BQ17R55 369 aa20.66■□□□□ 0.9
SPIDR-220ENST00000522900 TMEM175Q9BSA9 504 aa20.66■□□□□ 0.9
SPIDR-220ENST00000522900 CCDC113Q9H0I3 377 aa20.66■□□□□ 0.9
SPIDR-220ENST00000522900 PDZD7Q9H5P4 517 aa20.66■□□□□ 0.9
SPIDR-220ENST00000522900 DNM3Q9UQ16 869 aa20.66■□□□□ 0.9
SPIDR-220ENST00000522900 GIT1Q9Y2X7 761 aa20.66■□□□□ 0.9
SPIDR-220ENST00000522900 PRG3Q9Y2Y8 225 aaPredicted RBP20.66■□□□□ 0.9
SPIDR-220ENST00000522900 STK24Q9Y6E0 443 aa20.66■□□□□ 0.9
SPIDR-220ENST00000522900 FSD2A1L4K1 749 aa20.65■□□□□ 0.9
SPIDR-220ENST00000522900 FAM86C2PA6NEL3 165 aa20.65■□□□□ 0.9
SPIDR-220ENST00000522900 F8W810 466 aa20.65■□□□□ 0.9
SPIDR-220ENST00000522900 PRKCBP05771 671 aa20.65■□□□□ 0.9
SPIDR-220ENST00000522900 COL9A1P20849 921 aa20.65■□□□□ 0.9
SPIDR-220ENST00000522900 DSC1Q08554 894 aa20.65■□□□□ 0.9
SPIDR-220ENST00000522900 PRPF4BQ13523 1007 aaKnown RBP20.65■□□□□ 0.9
SPIDR-220ENST00000522900 CUL4AQ13619 759 aa20.65■□□□□ 0.9
SPIDR-220ENST00000522900 TAS1R1Q7RTX1 841 aa20.65■□□□□ 0.9
SPIDR-220ENST00000522900 SUSD6Q92537 303 aa20.65■□□□□ 0.9
SPIDR-220ENST00000522900 PRIMPOLQ96LW4 560 aa20.65■□□□□ 0.9
SPIDR-220ENST00000522900 BACH2Q9BYV9 841 aa20.65■□□□□ 0.9
SPIDR-220ENST00000522900 C2orf40Q9H1Z8 148 aa20.65■□□□□ 0.9
SPIDR-220ENST00000522900 MARCH5Q9NX47 278 aa20.65■□□□□ 0.9
SPIDR-220ENST00000522900 PARP2Q9UGN5 583 aa20.65■□□□□ 0.9
SPIDR-220ENST00000522900 HCFC2Q9Y5Z7 792 aa20.65■□□□□ 0.9
SPIDR-220ENST00000522900 CARNS1A5YM72 827 aa20.64■□□□□ 0.89
SPIDR-220ENST00000522900 ACKR2O00590 384 aa20.64■□□□□ 0.89
SPIDR-220ENST00000522900 SSBP05455 408 aaKnown RBP eCLIP20.64■□□□□ 0.89
SPIDR-220ENST00000522900 OR1G1P47890 313 aa20.64■□□□□ 0.89
SPIDR-220ENST00000522900 ZRSR1Q15695 479 aaKnown RBP20.64■□□□□ 0.89
SPIDR-220ENST00000522900 MAPK6Q16659 721 aa20.64■□□□□ 0.89
SPIDR-220ENST00000522900 EEF1DP3Q658K8 133 aa20.64■□□□□ 0.89
SPIDR-220ENST00000522900 KIFAP3Q92845 792 aa20.64■□□□□ 0.89
SPIDR-220ENST00000522900 IFT74Q96LB3 600 aa20.64■□□□□ 0.89
SPIDR-220ENST00000522900 PNMA5Q96PV4 448 aa20.64■□□□□ 0.89
SPIDR-220ENST00000522900 PLIN2Q99541 437 aa20.64■□□□□ 0.89
SPIDR-220ENST00000522900 LRFN3Q9BTN0 628 aa20.64■□□□□ 0.89
SPIDR-220ENST00000522900 RUSC1Q9BVN2 902 aa20.64■□□□□ 0.89
SPIDR-220ENST00000522900 CXCL16Q9H2A7 254 aa20.64■□□□□ 0.89
SPIDR-220ENST00000522900 CDH22Q9UJ99 828 aa20.64■□□□□ 0.89
SPIDR-220ENST00000522900 IRAK3Q9Y616 596 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms