RNA–Protein interactions for RNA: ENST00000522515.5

LSM1-204, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 3

Gene LSM1, Length 1,568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-204ENST00000522515 TRIM49BA6NDI0 452 aa17.82■□□□□ 0.44
LSM1-204ENST00000522515 PDXKO00764 312 aa17.82■□□□□ 0.44
LSM1-204ENST00000522515 CCNE1P24864 410 aa17.82■□□□□ 0.44
LSM1-204ENST00000522515 AXLP30530 894 aa17.82■□□□□ 0.44
LSM1-204ENST00000522515 STX17P56962 302 aa17.82■□□□□ 0.44
LSM1-204ENST00000522515 NCBP1Q09161 790 aaKnown RBP17.82■□□□□ 0.44
LSM1-204ENST00000522515 ZCWPW2Q504Y3 356 aa17.82■□□□□ 0.44
LSM1-204ENST00000522515 EEF1DP3Q658K8 133 aa17.82■□□□□ 0.44
LSM1-204ENST00000522515 TMEM199Q8N511 208 aa17.82■□□□□ 0.44
LSM1-204ENST00000522515 NELFBQ8WX92 580 aa17.82■□□□□ 0.44
LSM1-204ENST00000522515 P2RX5Q93086 422 aa17.82■□□□□ 0.44
LSM1-204ENST00000522515 MED15Q96RN5 788 aa17.82■□□□□ 0.44
LSM1-204ENST00000522515 PDZD7Q9H5P4 517 aa17.82■□□□□ 0.44
LSM1-204ENST00000522515 PTPRHQ9HD43 1115 aa17.82■□□□□ 0.44
LSM1-204ENST00000522515 TYW1Q9NV66 732 aaKnown RBP17.82■□□□□ 0.44
LSM1-204ENST00000522515 DACH1Q9UI36 760 aa17.82■□□□□ 0.44
LSM1-204ENST00000522515 TNFSF13BQ9Y275 285 aa17.82■□□□□ 0.44
LSM1-204ENST00000522515 ABLIM1O14639 778 aa17.81■□□□□ 0.44
LSM1-204ENST00000522515 CLIC2O15247 247 aa17.81■□□□□ 0.44
LSM1-204ENST00000522515 TOM1L1O75674 476 aa17.81■□□□□ 0.44
LSM1-204ENST00000522515 PROZP22891 400 aa17.81■□□□□ 0.44
LSM1-204ENST00000522515 ADSSP30520 456 aa17.81■□□□□ 0.44
LSM1-204ENST00000522515 RFC2P35250 354 aa17.81■□□□□ 0.44
LSM1-204ENST00000522515 PAK1Q13153 545 aa17.81■□□□□ 0.44
LSM1-204ENST00000522515 TCTN1Q2MV58 587 aa17.81■□□□□ 0.44
LSM1-204ENST00000522515 ANKRD40Q6AI12 368 aa17.81■□□□□ 0.44
LSM1-204ENST00000522515 LRSAM1Q6UWE0 723 aa17.81■□□□□ 0.44
LSM1-204ENST00000522515 HS2ST1Q7LGA3 356 aa17.81■□□□□ 0.44
LSM1-204ENST00000522515 BADQ92934 168 aa17.81■□□□□ 0.44
LSM1-204ENST00000522515 HAPLN2Q9GZV7 340 aa17.81■□□□□ 0.44
LSM1-204ENST00000522515 AGPAT3Q9NRZ7 376 aa17.81■□□□□ 0.44
LSM1-204ENST00000522515 ANKFY1Q9P2R3 1169 aa17.81■□□□□ 0.44
LSM1-204ENST00000522515 TRAF3IP3Q9Y228 551 aa17.81■□□□□ 0.44
LSM1-204ENST00000522515 TET1Q8NFU7 2136 aa17.81■□□□□ 0.44
LSM1-204ENST00000522515 LTBP2Q14767 1821 aa17.8■□□□□ 0.44
LSM1-204ENST00000522515 MGEA5O60502 916 aa17.8■□□□□ 0.44
LSM1-204ENST00000522515 ZNF445P59923 1031 aa17.8■□□□□ 0.44
LSM1-204ENST00000522515 DSC3Q14574 896 aa17.8■□□□□ 0.44
LSM1-204ENST00000522515 NOTUMQ6P988 496 aa17.8■□□□□ 0.44
LSM1-204ENST00000522515 MPZL3Q6UWV2 235 aa17.8■□□□□ 0.44
LSM1-204ENST00000522515 ZBTB33Q86T24 672 aa17.8■□□□□ 0.44
LSM1-204ENST00000522515 SEPT8Q92599 483 aa17.8■□□□□ 0.44
LSM1-204ENST00000522515 CBWD1Q9BRT8 395 aa17.8■□□□□ 0.44
LSM1-204ENST00000522515 TCHPQ9BT92 498 aa17.8■□□□□ 0.44
LSM1-204ENST00000522515 CHST12Q9NRB3 414 aa17.8■□□□□ 0.44
LSM1-204ENST00000522515 STYXL1Q9Y6J8 313 aa17.8■□□□□ 0.44
LSM1-204ENST00000522515 N4BP3O15049 544 aa17.79■□□□□ 0.44
LSM1-204ENST00000522515 CLDN3O15551 220 aa17.79■□□□□ 0.44
LSM1-204ENST00000522515 ZNF568Q3ZCX4 644 aa17.79■□□□□ 0.44
LSM1-204ENST00000522515 CT47A1Q5JQC4 288 aaPredicted RBP17.79■□□□□ 0.44
LSM1-204ENST00000522515 TWF2Q6IBS0 349 aaKnown RBP17.79■□□□□ 0.44
LSM1-204ENST00000522515 TTI2Q6NXR4 508 aa17.79■□□□□ 0.44
LSM1-204ENST00000522515 SLC27A1Q6PCB7 646 aa17.79■□□□□ 0.44
LSM1-204ENST00000522515 RTN4RL1Q86UN2 441 aaPredicted RBP17.79■□□□□ 0.44
LSM1-204ENST00000522515 POMGNT1Q8WZA1 660 aa17.79■□□□□ 0.44
LSM1-204ENST00000522515 ADAM2Q99965 735 aa17.79■□□□□ 0.44
LSM1-204ENST00000522515 EIF2AQ9BY44 585 aaKnown RBP17.79■□□□□ 0.44
LSM1-204ENST00000522515 CDT1Q9H211 546 aa17.79■□□□□ 0.44
LSM1-204ENST00000522515 PCIF1Q9H4Z3 704 aa17.79■□□□□ 0.44
LSM1-204ENST00000522515 RWDD2AQ9UIY3 292 aa17.79■□□□□ 0.44
LSM1-204ENST00000522515 CALUO43852 315 aaPredicted RBP17.79■□□□□ 0.44
LSM1-204ENST00000522515 ZSCAN20P17040 1043 aaPredicted RBP17.79■□□□□ 0.44
LSM1-204ENST00000522515 ERCC5P28715 1186 aaPredicted RBP17.79■□□□□ 0.44
LSM1-204ENST00000522515 MATR3P43243 847 aaKnown RBP eCLIP17.79■□□□□ 0.444e-6■■■□□ 17.4
LSM1-204ENST00000522515 SNRPFP62306 86 aaKnown RBP17.79■□□□□ 0.44
LSM1-204ENST00000522515 LRRC63Q05C16 580 aa17.79■□□□□ 0.44
LSM1-204ENST00000522515 MCL1Q07820 350 aa17.79■□□□□ 0.44
LSM1-204ENST00000522515 UBXN11Q5T124 520 aa17.79■□□□□ 0.44
LSM1-204ENST00000522515 SLFN12LQ6IEE8 588 aa17.79■□□□□ 0.44
LSM1-204ENST00000522515 ARMCX5Q6P1M9 558 aa17.79■□□□□ 0.44
LSM1-204ENST00000522515 GOLGA5Q8TBA6 731 aa17.79■□□□□ 0.44
LSM1-204ENST00000522515 LINC01599Q8WXQ3 324 aa17.79■□□□□ 0.44
LSM1-204ENST00000522515 APBB2Q92870 758 aa17.79■□□□□ 0.44
LSM1-204ENST00000522515 TSG101Q99816 390 aa17.79■□□□□ 0.44
LSM1-204ENST00000522515 DUSP9Q99956 384 aaKnown RBP17.79■□□□□ 0.44
LSM1-204ENST00000522515 CGNQ9P2M7 1197 aaKnown RBP17.79■□□□□ 0.44
LSM1-204ENST00000522515 A0A0B4J269 797 aa17.78■□□□□ 0.44
LSM1-204ENST00000522515 BICDL2A1A5D9 508 aa17.78■□□□□ 0.44
LSM1-204ENST00000522515 NPTXRO95502 500 aa17.78■□□□□ 0.44
LSM1-204ENST00000522515 ACRP10323 421 aa17.78■□□□□ 0.44
LSM1-204ENST00000522515 HARSP12081 509 aaKnown RBP17.78■□□□□ 0.44
LSM1-204ENST00000522515 GARTP22102 1010 aa17.78■□□□□ 0.44
LSM1-204ENST00000522515 NOLC1Q14978 699 aaKnown RBP eCLIP17.78■□□□□ 0.44
LSM1-204ENST00000522515 EDRF1Q3B7T1 1238 aa17.78■□□□□ 0.44
LSM1-204ENST00000522515 C12orf56Q8IXR9 622 aa17.78■□□□□ 0.44
LSM1-204ENST00000522515 ZSWIM2Q8NEG5 633 aa17.78■□□□□ 0.44
LSM1-204ENST00000522515 CCDC51Q96ER9 411 aa17.78■□□□□ 0.44
LSM1-204ENST00000522515 EEF2KMTQ96G04 330 aa17.78■□□□□ 0.44
LSM1-204ENST00000522515 ADPGKQ9BRR6 497 aa17.78■□□□□ 0.44
LSM1-204ENST00000522515 FTHL17Q9BXU8 183 aa17.78■□□□□ 0.44
LSM1-204ENST00000522515 IL23AQ9NPF7 189 aa17.78■□□□□ 0.44
LSM1-204ENST00000522515 NR2E3Q9Y5X4 410 aa17.78■□□□□ 0.44
LSM1-204ENST00000522515 CAPN15O75808 1086 aa17.77■□□□□ 0.44
LSM1-204ENST00000522515 NR3C1P04150 777 aa17.77■□□□□ 0.44
LSM1-204ENST00000522515 ZNF165P49910 485 aa17.77■□□□□ 0.44
LSM1-204ENST00000522515 CYP2J2P51589 502 aa17.77■□□□□ 0.44
LSM1-204ENST00000522515 FPGSQ05932 587 aa17.77■□□□□ 0.44
LSM1-204ENST00000522515 NFIL3Q16649 462 aa17.77■□□□□ 0.44
LSM1-204ENST00000522515 CNKSR3Q6P9H4 555 aa17.77■□□□□ 0.44
LSM1-204ENST00000522515 C16orf59Q7L2K0 433 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms