RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 PFDN6O15212 129 aa14.73□□□□□ -0.05
SYNPO-205ENST00000522122 ABL1P00519 1130 aa14.73□□□□□ -0.05
SYNPO-205ENST00000522122 TFDP2Q14188 446 aa14.73□□□□□ -0.05
SYNPO-205ENST00000522122 PASD1Q8IV76 773 aa14.73□□□□□ -0.05
SYNPO-205ENST00000522122 C3orf20Q8ND61 904 aa14.73□□□□□ -0.05
SYNPO-205ENST00000522122 MAML1Q92585 1016 aa14.73□□□□□ -0.05
SYNPO-205ENST00000522122 FAM53CQ9NYF3 392 aa14.73□□□□□ -0.05
SYNPO-205ENST00000522122 FEM1BQ9UK73 627 aa14.73□□□□□ -0.05
SYNPO-205ENST00000522122 ESYT2A0FGR8 921 aa14.73□□□□□ -0.05
SYNPO-205ENST00000522122 ATP5HO75947 161 aa14.73□□□□□ -0.05
SYNPO-205ENST00000522122 ADRA2BP18089 450 aa14.73□□□□□ -0.05
SYNPO-205ENST00000522122 RFC1P35251 1148 aaPredicted RBP14.73□□□□□ -0.05
SYNPO-205ENST00000522122 SYT2Q8N9I0 419 aaPredicted RBP14.73□□□□□ -0.05
SYNPO-205ENST00000522122 NLRP4Q96MN2 994 aa14.73□□□□□ -0.05
SYNPO-205ENST00000522122 SCOCQ9UIL1 159 aa14.73□□□□□ -0.05
SYNPO-205ENST00000522122 A0A0G2JND7 137 aa14.73□□□□□ -0.05
SYNPO-205ENST00000522122 CASKIN2Q8WXE0 1202 aa14.73□□□□□ -0.05
SYNPO-205ENST00000522122 TTC17Q96AE7 1141 aa14.73□□□□□ -0.05
SYNPO-205ENST00000522122 MLXIPLQ9NP71 852 aa14.73□□□□□ -0.05
SYNPO-205ENST00000522122 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.73□□□□□ -0.05
SYNPO-205ENST00000522122 ZWINTO95229 277 aa14.72□□□□□ -0.05
SYNPO-205ENST00000522122 KRT14P02533 472 aa14.72□□□□□ -0.05
SYNPO-205ENST00000522122 CALB1P05937 261 aa14.72□□□□□ -0.05
SYNPO-205ENST00000522122 GPSM2P81274 684 aa14.72□□□□□ -0.05
SYNPO-205ENST00000522122 COG7P83436 770 aa14.72□□□□□ -0.05
SYNPO-205ENST00000522122 ZNF543Q08ER8 600 aa14.72□□□□□ -0.05
SYNPO-205ENST00000522122 PLCB4Q15147 1175 aa14.72□□□□□ -0.05
SYNPO-205ENST00000522122 EAPPQ56P03 285 aaPredicted RBP14.72□□□□□ -0.05
SYNPO-205ENST00000522122 KRT27Q7Z3Y8 459 aa14.72□□□□□ -0.05
SYNPO-205ENST00000522122 DPP9Q86TI2 863 aa14.72□□□□□ -0.05
SYNPO-205ENST00000522122 GGPS1O95749 300 aa14.72□□□□□ -0.05
SYNPO-205ENST00000522122 GRB10Q13322 594 aa14.72□□□□□ -0.05
SYNPO-205ENST00000522122 EDRF1Q3B7T1 1238 aa14.72□□□□□ -0.05
SYNPO-205ENST00000522122 FAF2Q96CS3 445 aa14.72□□□□□ -0.05
SYNPO-205ENST00000522122 LRGUKQ96M69 825 aa14.72□□□□□ -0.05
SYNPO-205ENST00000522122 TRIM4Q9C037 500 aa14.72□□□□□ -0.05
SYNPO-205ENST00000522122 SEMA6BQ9H3T3 888 aa14.72□□□□□ -0.05
SYNPO-205ENST00000522122 EPS15L1Q9UBC2 864 aa14.72□□□□□ -0.05
SYNPO-205ENST00000522122 TTC7AQ9ULT0 858 aaPredicted RBP14.72□□□□□ -0.05
SYNPO-205ENST00000522122 SFNP31947 248 aa14.72□□□□□ -0.05
SYNPO-205ENST00000522122 EPHA7Q15375 998 aa14.72□□□□□ -0.05
SYNPO-205ENST00000522122 CDO1Q16878 200 aa14.72□□□□□ -0.05
SYNPO-205ENST00000522122 JADE1Q6IE81 842 aa14.72□□□□□ -0.05
SYNPO-205ENST00000522122 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.72□□□□□ -0.05
SYNPO-205ENST00000522122 HSPH1Q92598 858 aa14.72□□□□□ -0.05
SYNPO-205ENST00000522122 SPATS2LQ9NUQ6 558 aaKnown RBP14.72□□□□□ -0.05
SYNPO-205ENST00000522122 EHD2Q9NZN4 543 aa14.72□□□□□ -0.05
SYNPO-205ENST00000522122 COPEO14579 308 aa14.72□□□□□ -0.05
SYNPO-205ENST00000522122 FAM107AO95990 144 aa14.72□□□□□ -0.05
SYNPO-205ENST00000522122 C16orf86Q6ZW13 317 aa14.72□□□□□ -0.05
SYNPO-205ENST00000522122 MCUQ8NE86 351 aa14.72□□□□□ -0.05
SYNPO-205ENST00000522122 RGL1Q9NZL6 768 aa14.72□□□□□ -0.05
SYNPO-205ENST00000522122 UCHL3P15374 230 aa14.71□□□□□ -0.05
SYNPO-205ENST00000522122 RASA1P20936 1047 aa14.71□□□□□ -0.05
SYNPO-205ENST00000522122 NMT1P30419 496 aaKnown RBP14.71□□□□□ -0.05
SYNPO-205ENST00000522122 CIAPIN1Q6FI81 312 aa14.71□□□□□ -0.05
SYNPO-205ENST00000522122 ENOSF1Q7L5Y1 443 aa14.71□□□□□ -0.05
SYNPO-205ENST00000522122 KLC2Q9H0B6 622 aa14.71□□□□□ -0.05
SYNPO-205ENST00000522122 RAVER2Q9HCJ3 691 aaKnown RBP14.71□□□□□ -0.05
SYNPO-205ENST00000522122 MID2Q9UJV3 735 aa14.71□□□□□ -0.05
SYNPO-205ENST00000522122 MAP3K7O43318 606 aa14.71□□□□□ -0.05
SYNPO-205ENST00000522122 SYF2O95926 243 aaKnown RBP14.71□□□□□ -0.05
SYNPO-205ENST00000522122 STX1BP61266 288 aa14.71□□□□□ -0.05
SYNPO-205ENST00000522122 TMPRSS15P98073 1019 aa14.71□□□□□ -0.05
SYNPO-205ENST00000522122 HAUS6Q7Z4H7 955 aa14.71□□□□□ -0.05
SYNPO-205ENST00000522122 CYFIP2Q96F07 1278 aa14.71□□□□□ -0.05
SYNPO-205ENST00000522122 FGFR1OP2Q9NVK5 253 aa14.71□□□□□ -0.05
SYNPO-205ENST00000522122 LCMT1Q9UIC8 334 aa14.71□□□□□ -0.05
SYNPO-205ENST00000522122 FOXP2O15409 715 aa14.71□□□□□ -0.05
SYNPO-205ENST00000522122 MAPK6Q16659 721 aa14.71□□□□□ -0.05
SYNPO-205ENST00000522122 BZW1Q7L1Q6 419 aaKnown RBP14.71□□□□□ -0.05
SYNPO-205ENST00000522122 CRLF3Q8IUI8 442 aa14.71□□□□□ -0.05
SYNPO-205ENST00000522122 WDR75Q8IWA0 830 aaKnown RBP14.71□□□□□ -0.05
SYNPO-205ENST00000522122 RHOT1Q8IXI2 618 aa14.71□□□□□ -0.05
SYNPO-205ENST00000522122 RTKN2Q8IZC4 609 aa14.71□□□□□ -0.05
SYNPO-205ENST00000522122 AGPAT1Q99943 283 aa14.71□□□□□ -0.05
SYNPO-205ENST00000522122 ARHGAP20Q9P2F6 1191 aa14.71□□□□□ -0.05
SYNPO-205ENST00000522122 ANGPTL2Q9UKU9 493 aa14.71□□□□□ -0.05
SYNPO-205ENST00000522122 KCNQ2O43526 872 aa14.71□□□□□ -0.06
SYNPO-205ENST00000522122 TFRCP02786 760 aaKnown RBP14.71□□□□□ -0.06
SYNPO-205ENST00000522122 OATP04181 439 aa14.71□□□□□ -0.06
SYNPO-205ENST00000522122 AMPD2Q01433 879 aa14.71□□□□□ -0.06
SYNPO-205ENST00000522122 BYSLQ13895 437 aaKnown RBP14.71□□□□□ -0.06
SYNPO-205ENST00000522122 EZH2Q15910 746 aaKnown RBP14.71□□□□□ -0.06
SYNPO-205ENST00000522122 CEP55Q53EZ4 464 aa14.71□□□□□ -0.06
SYNPO-205ENST00000522122 SEPT12Q8IYM1 358 aa14.71□□□□□ -0.06
SYNPO-205ENST00000522122 DCLK2Q8N568 766 aa14.71□□□□□ -0.06
SYNPO-205ENST00000522122 FBXL13Q8NEE6 735 aa14.71□□□□□ -0.06
SYNPO-205ENST00000522122 ZNF507Q8TCN5 953 aa14.71□□□□□ -0.06
SYNPO-205ENST00000522122 DEPDC1BQ8WUY9 529 aa14.71□□□□□ -0.06
SYNPO-205ENST00000522122 SAAL1Q96ER3 474 aa14.71□□□□□ -0.06
SYNPO-205ENST00000522122 STRIP2Q9ULQ0 834 aa14.71□□□□□ -0.06
SYNPO-205ENST00000522122 SUGT1Q9Y2Z0 365 aa14.71□□□□□ -0.06
SYNPO-205ENST00000522122 NPHP3-ACAD11A0A0J9YXS1 232 aa14.7□□□□□ -0.06
SYNPO-205ENST00000522122 KRT38O76015 456 aa14.7□□□□□ -0.06
SYNPO-205ENST00000522122 TBXAS1P24557 533 aaPredicted RBP14.7□□□□□ -0.06
SYNPO-205ENST00000522122 TNFRSF8P28908 595 aa14.7□□□□□ -0.06
SYNPO-205ENST00000522122 HNRNPH1P31943 449 aaKnown RBP14.7□□□□□ -0.06
SYNPO-205ENST00000522122 GALCP54803 685 aa14.7□□□□□ -0.06
SYNPO-205ENST00000522122 PSMC5P62195 406 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms