RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 FRMD5Q7Z6J6 570 aa17.25■□□□□ 0.35
USP42-207ENST00000521713 FBXL13Q8NEE6 735 aa17.25■□□□□ 0.35
USP42-207ENST00000521713 MAP3K20Q9NYL2 800 aaKnown RBP17.25■□□□□ 0.35
USP42-207ENST00000521713 ATP8A1Q9Y2Q0 1164 aa17.25■□□□□ 0.35
USP42-207ENST00000521713 MOCS3O95396 460 aa17.25■□□□□ 0.35
USP42-207ENST00000521713 PHEXP78562 749 aa17.25■□□□□ 0.35
USP42-207ENST00000521713 TRIM72Q6ZMU5 477 aa17.25■□□□□ 0.35
USP42-207ENST00000521713 FAM83AQ86UY5 434 aa17.25■□□□□ 0.35
USP42-207ENST00000521713 NDUFAF2Q8N183 169 aa17.25■□□□□ 0.35
USP42-207ENST00000521713 CNTNAP5Q8WYK1 1306 aa17.25■□□□□ 0.35
USP42-207ENST00000521713 RASGRF2O14827 1237 aa17.25■□□□□ 0.35
USP42-207ENST00000521713 TTC4O95801 387 aa17.25■□□□□ 0.35
USP42-207ENST00000521713 FCGRTP55899 365 aa17.25■□□□□ 0.35
USP42-207ENST00000521713 LAMC2Q13753 1193 aa17.25■□□□□ 0.35
USP42-207ENST00000521713 PTPN21Q16825 1174 aa17.25■□□□□ 0.35
USP42-207ENST00000521713 RBM41Q96IZ5 413 aaKnown RBP17.25■□□□□ 0.35
USP42-207ENST00000521713 ZNF668Q96K58 619 aaPredicted RBP17.25■□□□□ 0.35
USP42-207ENST00000521713 PIN4Q9Y237 131 aaKnown RBP17.25■□□□□ 0.35
USP42-207ENST00000521713 DIS3Q9Y2L1 958 aaKnown RBP17.25■□□□□ 0.35
USP42-207ENST00000521713 UBE4BO95155 1302 aa17.24■□□□□ 0.35
USP42-207ENST00000521713 ZBED1O96006 694 aa17.24■□□□□ 0.35
USP42-207ENST00000521713 ICAM1P05362 532 aa17.24■□□□□ 0.35
USP42-207ENST00000521713 EPHB1P54762 984 aa17.24■□□□□ 0.35
USP42-207ENST00000521713 GPC5P78333 572 aa17.24■□□□□ 0.35
USP42-207ENST00000521713 PDCD2Q16342 344 aaPredicted RBP17.24■□□□□ 0.35
USP42-207ENST00000521713 LRRC31Q6UY01 552 aa17.24■□□□□ 0.35
USP42-207ENST00000521713 TRIM62Q9BVG3 475 aa17.24■□□□□ 0.35
USP42-207ENST00000521713 YY1AP1Q9H869 796 aa17.24■□□□□ 0.35
USP42-207ENST00000521713 UBE2Q2LH0YL09 131 aa17.24■□□□□ 0.35
USP42-207ENST00000521713 GPRASP2Q96D09 838 aa17.24■□□□□ 0.35
USP42-207ENST00000521713 FMO2Q99518 471 aa17.24■□□□□ 0.35
USP42-207ENST00000521713 EDEM3Q9BZQ6 932 aa17.24■□□□□ 0.35
USP42-207ENST00000521713 CACYBPQ9HB71 228 aaKnown RBP17.24■□□□□ 0.35
USP42-207ENST00000521713 FAM217BQ9NTX9 383 aaPredicted RBP17.24■□□□□ 0.35
USP42-207ENST00000521713 ERAP1Q9NZ08 941 aa17.24■□□□□ 0.35
USP42-207ENST00000521713 DTNBP1Q96EV8 351 aa17.24■□□□□ 0.35
USP42-207ENST00000521713 TNIP3Q96KP6 325 aa17.24■□□□□ 0.35
USP42-207ENST00000521713 MOV10L1Q9BXT6 1211 aaKnown RBP17.24■□□□□ 0.35
USP42-207ENST00000521713 INTS2Q9H0H0 1204 aaKnown RBP17.24■□□□□ 0.35
USP42-207ENST00000521713 HBP1O60381 514 aa17.24■□□□□ 0.35
USP42-207ENST00000521713 ZMYND10O75800 440 aa17.24■□□□□ 0.35
USP42-207ENST00000521713 SATB1Q01826 763 aa17.24■□□□□ 0.35
USP42-207ENST00000521713 SKA2Q8WVK7 121 aaPredicted RBP17.24■□□□□ 0.35
USP42-207ENST00000521713 BACE1P56817 501 aa17.23■□□□□ 0.35
USP42-207ENST00000521713 BASP1P80723 227 aaKnown RBP17.23■□□□□ 0.35
USP42-207ENST00000521713 NFIAQ12857 509 aa17.23■□□□□ 0.35
USP42-207ENST00000521713 LRGUKQ96M69 825 aa17.23■□□□□ 0.35
USP42-207ENST00000521713 AGBL1Q96MI9 1066 aa17.23■□□□□ 0.35
USP42-207ENST00000521713 ANAPC7Q9UJX3 599 aa17.23■□□□□ 0.35
USP42-207ENST00000521713 PACSIN2Q9UNF0 486 aaPredicted RBP17.23■□□□□ 0.35
USP42-207ENST00000521713 RRN3P2A6NIE6 340 aa17.23■□□□□ 0.35
USP42-207ENST00000521713 GSTA1P08263 222 aa17.23■□□□□ 0.35
USP42-207ENST00000521713 GSTA2P09210 222 aa17.23■□□□□ 0.35
USP42-207ENST00000521713 PRR29P0C7W0 189 aa17.23■□□□□ 0.35
USP42-207ENST00000521713 SCP2P22307 547 aa17.23■□□□□ 0.35
USP42-207ENST00000521713 C1orf228Q6PIY5 440 aa17.23■□□□□ 0.35
USP42-207ENST00000521713 TTC13Q8NBP0 860 aa17.23■□□□□ 0.35
USP42-207ENST00000521713 GBA2Q9HCG7 927 aaPredicted RBP17.23■□□□□ 0.35
USP42-207ENST00000521713 A8MXQ7 604 aa17.23■□□□□ 0.35
USP42-207ENST00000521713 S100BP04271 92 aaPredicted RBP17.23■□□□□ 0.35
USP42-207ENST00000521713 SDC4P31431 198 aa17.23■□□□□ 0.35
USP42-207ENST00000521713 TROAPQ12815 778 aa17.23■□□□□ 0.35
USP42-207ENST00000521713 SNX1Q13596 522 aa17.23■□□□□ 0.35
USP42-207ENST00000521713 CDO1Q16878 200 aa17.23■□□□□ 0.35
USP42-207ENST00000521713 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.23■□□□□ 0.35
USP42-207ENST00000521713 RTFDC1Q9BY42 306 aaPredicted RBP17.23■□□□□ 0.35
USP42-207ENST00000521713 TJP3O95049 919 aa17.23■□□□□ 0.35
USP42-207ENST00000521713 VEPH1Q14D04 833 aa17.23■□□□□ 0.35
USP42-207ENST00000521713 ZKSCAN4Q969J2 545 aaPredicted RBP17.23■□□□□ 0.35
USP42-207ENST00000521713 FAM205AQ6ZU69 1335 aa17.23■□□□□ 0.35
USP42-207ENST00000521713 SALL1Q9NSC2 1324 aa17.23■□□□□ 0.35
USP42-207ENST00000521713 ZRANB2O95218 330 aaKnown RBP eCLIP17.22■□□□□ 0.35
USP42-207ENST00000521713 SAT1P21673 171 aa17.22■□□□□ 0.35
USP42-207ENST00000521713 RPS6P62753 249 aaKnown RBP17.22■□□□□ 0.35
USP42-207ENST00000521713 TBC1D1Q86TI0 1168 aaPredicted RBP17.22■□□□□ 0.35
USP42-207ENST00000521713 XAB2Q9HCS7 855 aaKnown RBP17.22■□□□□ 0.35
USP42-207ENST00000521713 DPYSL4O14531 572 aa17.22■□□□□ 0.35
USP42-207ENST00000521713 SLC16A3O15427 465 aaKnown RBP17.22■□□□□ 0.35
USP42-207ENST00000521713 RGS2P41220 211 aa17.22■□□□□ 0.35
USP42-207ENST00000521713 DGKDQ16760 1214 aa17.22■□□□□ 0.35
USP42-207ENST00000521713 UHMK1Q8TAS1 419 aaKnown RBP17.22■□□□□ 0.35
USP42-207ENST00000521713 ABTB1Q969K4 478 aaPredicted RBP17.22■□□□□ 0.35
USP42-207ENST00000521713 C7orf25Q9BPX7 421 aa17.22■□□□□ 0.35
USP42-207ENST00000521713 MROH8Q9H579 483 aa17.22■□□□□ 0.35
USP42-207ENST00000521713 LMCD1Q9NZU5 365 aa17.22■□□□□ 0.35
USP42-207ENST00000521713 SCAF8Q9UPN6 1271 aaKnown RBP17.22■□□□□ 0.35
USP42-207ENST00000521713 PPLO60437 1756 aa17.22■□□□□ 0.35
USP42-207ENST00000521713 RECQLP46063 649 aaPredicted RBP17.22■□□□□ 0.35
USP42-207ENST00000521713 ASPHQ12797 758 aa17.22■□□□□ 0.35
USP42-207ENST00000521713 PPP2R3CQ969Q6 453 aa17.22■□□□□ 0.35
USP42-207ENST00000521713 VIPAS39Q9H9C1 493 aa17.22■□□□□ 0.35
USP42-207ENST00000521713 ANKEF1Q9NU02 776 aa17.22■□□□□ 0.35
USP42-207ENST00000521713 PSD3Q9NYI0 1048 aa17.22■□□□□ 0.35
USP42-207ENST00000521713 NMT1P30419 496 aaKnown RBP17.22■□□□□ 0.35
USP42-207ENST00000521713 GNA15P30679 374 aa17.22■□□□□ 0.35
USP42-207ENST00000521713 CPT1AP50416 773 aa17.22■□□□□ 0.35
USP42-207ENST00000521713 PLTPP55058 493 aa17.22■□□□□ 0.35
USP42-207ENST00000521713 RWDD4Q6NW29 188 aaKnown RBP17.22■□□□□ 0.35
USP42-207ENST00000521713 PARP9Q8IXQ6 854 aa17.22■□□□□ 0.35
USP42-207ENST00000521713 ANKRD7Q92527 254 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms