RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 ZNF280BQ86YH2 543 aa12.49□□□□□ -0.41
CSMD1-210ENST00000521646 TEX2Q8IWB9 1127 aa12.49□□□□□ -0.41
CSMD1-210ENST00000521646 SMAP1Q8IYB5 467 aaPredicted RBP12.49□□□□□ -0.41
CSMD1-210ENST00000521646 SLC22A17Q8WUG5 538 aa12.49□□□□□ -0.41
CSMD1-210ENST00000521646 RIPOR3Q96MK2 946 aa12.49□□□□□ -0.41
CSMD1-210ENST00000521646 ADAM7Q9H2U9 754 aa12.49□□□□□ -0.41
CSMD1-210ENST00000521646 NRDE2Q9H7Z3 1164 aa12.49□□□□□ -0.41
CSMD1-210ENST00000521646 TBC1D22BQ9NU19 505 aa12.49□□□□□ -0.41
CSMD1-210ENST00000521646 SPG21Q9NZD8 308 aa12.49□□□□□ -0.41
CSMD1-210ENST00000521646 COL4A3Q01955 1670 aa12.48□□□□□ -0.41
CSMD1-210ENST00000521646 A0A087WZ62 844 aa12.48□□□□□ -0.41
CSMD1-210ENST00000521646 F8W810 466 aa12.48□□□□□ -0.41
CSMD1-210ENST00000521646 EML1O00423 815 aa12.48□□□□□ -0.41
CSMD1-210ENST00000521646 N4BP1O75113 896 aaKnown RBP12.48□□□□□ -0.41
CSMD1-210ENST00000521646 RCAN1P53805 252 aa12.48□□□□□ -0.41
CSMD1-210ENST00000521646 SETQ01105 290 aaPredicted RBP12.48□□□□□ -0.41
CSMD1-210ENST00000521646 RARS2Q5T160 578 aaKnown RBP12.48□□□□□ -0.41
CSMD1-210ENST00000521646 PLA2G4FQ68DD2 849 aa12.48□□□□□ -0.41
CSMD1-210ENST00000521646 CWF19L1Q69YN2 538 aaKnown RBP12.48□□□□□ -0.41
CSMD1-210ENST00000521646 PDE12Q6L8Q7 609 aaKnown RBP12.48□□□□□ -0.41
CSMD1-210ENST00000521646 ANO5Q75V66 913 aa12.48□□□□□ -0.41
CSMD1-210ENST00000521646 SUGP1Q8IWZ8 645 aaKnown RBP12.48□□□□□ -0.41
CSMD1-210ENST00000521646 TNPO1Q92973 898 aaKnown RBP12.48□□□□□ -0.41
CSMD1-210ENST00000521646 CCDC136Q96JN2 1154 aa12.48□□□□□ -0.41
CSMD1-210ENST00000521646 JAKMIP1Q96N16 626 aaKnown RBP12.48□□□□□ -0.41
CSMD1-210ENST00000521646 FDXACB1Q9BRP7 624 aaPredicted RBP12.48□□□□□ -0.41
CSMD1-210ENST00000521646 MINDY3Q9H8M7 445 aa12.48□□□□□ -0.41
CSMD1-210ENST00000521646 NGRNQ9NPE2 291 aaKnown RBP12.48□□□□□ -0.41
CSMD1-210ENST00000521646 TBC1D13Q9NVG8 400 aa12.48□□□□□ -0.41
CSMD1-210ENST00000521646 NAP1L2Q9ULW6 460 aaPredicted RBP12.48□□□□□ -0.41
CSMD1-210ENST00000521646 SAMM50Q9Y512 469 aa12.48□□□□□ -0.41
CSMD1-210ENST00000521646 PTPRZ1P23471 2315 aaPredicted RBP12.48□□□□□ -0.41
CSMD1-210ENST00000521646 WDR64B1ANS9 1081 aa12.47□□□□□ -0.41
CSMD1-210ENST00000521646 MAGEB2O15479 319 aa12.47□□□□□ -0.41
CSMD1-210ENST00000521646 PI15O43692 258 aa12.47□□□□□ -0.41
CSMD1-210ENST00000521646 SLC37A4O43826 429 aa12.47□□□□□ -0.41
CSMD1-210ENST00000521646 DDHD2O94830 711 aa12.47□□□□□ -0.41
CSMD1-210ENST00000521646 HSPA4P34932 840 aa12.47□□□□□ -0.41
CSMD1-210ENST00000521646 PHKA2P46019 1235 aa12.47□□□□□ -0.41
CSMD1-210ENST00000521646 SLC11A1P49279 550 aa12.47□□□□□ -0.41
CSMD1-210ENST00000521646 CCT2P78371 535 aaKnown RBP12.47□□□□□ -0.41
CSMD1-210ENST00000521646 NNTQ13423 1086 aa12.47□□□□□ -0.41
CSMD1-210ENST00000521646 TOB2Q14106 344 aaPredicted RBP12.47□□□□□ -0.41
CSMD1-210ENST00000521646 MTERF2Q49AM1 385 aa12.47□□□□□ -0.41
CSMD1-210ENST00000521646 C4orf48Q5BLP8 95 aa12.47□□□□□ -0.41
CSMD1-210ENST00000521646 AGMOQ6ZNB7 445 aa12.47□□□□□ -0.41
CSMD1-210ENST00000521646 VPS52Q8N1B4 723 aa12.47□□□□□ -0.41
CSMD1-210ENST00000521646 ETNPPLQ8TBG4 499 aa12.47□□□□□ -0.41
CSMD1-210ENST00000521646 SNX27Q96L92 541 aa12.47□□□□□ -0.41
CSMD1-210ENST00000521646 NIFKQ9BYG3 293 aaKnown RBP12.47□□□□□ -0.41
CSMD1-210ENST00000521646 IFT122Q9HBG6 1241 aa12.47□□□□□ -0.41
CSMD1-210ENST00000521646 FAM186AA6NE01 2351 aa12.47□□□□□ -0.41
CSMD1-210ENST00000521646 ZC3H11AO75152 810 aaKnown RBP eCLIP12.46□□□□□ -0.41
CSMD1-210ENST00000521646 OFD1O75665 1012 aa12.46□□□□□ -0.41
CSMD1-210ENST00000521646 CXCL14O95715 111 aa12.46□□□□□ -0.41
CSMD1-210ENST00000521646 GALTP07902 379 aa12.46□□□□□ -0.41
CSMD1-210ENST00000521646 NPR3P17342 541 aa12.46□□□□□ -0.41
CSMD1-210ENST00000521646 PDIA3P30101 505 aaKnown RBP12.46□□□□□ -0.41
CSMD1-210ENST00000521646 NPEPPSP55786 919 aa12.46□□□□□ -0.41
CSMD1-210ENST00000521646 SMC1AQ14683 1233 aaKnown RBP12.46□□□□□ -0.41
CSMD1-210ENST00000521646 NR6A1Q15406 480 aa12.46□□□□□ -0.41
CSMD1-210ENST00000521646 PTPN14Q15678 1187 aa12.46□□□□□ -0.41
CSMD1-210ENST00000521646 UBXN11Q5T124 520 aa12.46□□□□□ -0.41
CSMD1-210ENST00000521646 LRCH2Q5VUJ6 765 aa12.46□□□□□ -0.41
CSMD1-210ENST00000521646 TAS1R1Q7RTX1 841 aa12.46□□□□□ -0.41
CSMD1-210ENST00000521646 TBCKQ8TEA7 893 aa12.46□□□□□ -0.41
CSMD1-210ENST00000521646 IGSF21Q96ID5 467 aa12.46□□□□□ -0.41
CSMD1-210ENST00000521646 MBOAT7Q96N66 472 aa12.46□□□□□ -0.41
CSMD1-210ENST00000521646 MAP7D2Q96T17 732 aa12.46□□□□□ -0.41
CSMD1-210ENST00000521646 SLC26A6Q9BXS9 759 aa12.46□□□□□ -0.41
CSMD1-210ENST00000521646 C6orf50Q9HD87 102 aa12.46□□□□□ -0.41
CSMD1-210ENST00000521646 GJB4Q9NTQ9 266 aa12.46□□□□□ -0.41
CSMD1-210ENST00000521646 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.45□□□□□ -0.42
CSMD1-210ENST00000521646 ZBTB39O15060 712 aa12.45□□□□□ -0.42
CSMD1-210ENST00000521646 GAS7O60861 476 aa12.45□□□□□ -0.42
CSMD1-210ENST00000521646 EFEMP2O95967 443 aa12.45□□□□□ -0.42
CSMD1-210ENST00000521646 CTSAP10619 480 aa12.45□□□□□ -0.42
CSMD1-210ENST00000521646 ZSCAN20P17040 1043 aaPredicted RBP12.45□□□□□ -0.42
CSMD1-210ENST00000521646 IFNAR1P17181 557 aa12.45□□□□□ -0.42
CSMD1-210ENST00000521646 HOXB8P17481 243 aaPredicted RBP12.45□□□□□ -0.42
CSMD1-210ENST00000521646 RPS6KB1P23443 525 aa12.45□□□□□ -0.42
CSMD1-210ENST00000521646 HOXA11P31270 313 aaPredicted RBP12.45□□□□□ -0.42
CSMD1-210ENST00000521646 PPM1AP35813 382 aa12.45□□□□□ -0.42
CSMD1-210ENST00000521646 EVCP57679 992 aa12.45□□□□□ -0.42
CSMD1-210ENST00000521646 TBC1D8BQ0IIM8 1120 aa12.45□□□□□ -0.42
CSMD1-210ENST00000521646 RNF20Q5VTR2 975 aa12.45□□□□□ -0.42
CSMD1-210ENST00000521646 TMC5Q6UXY8 1006 aa12.45□□□□□ -0.42
CSMD1-210ENST00000521646 FBXL16Q8N461 479 aa12.45□□□□□ -0.42
CSMD1-210ENST00000521646 CASP10Q92851 521 aa12.45□□□□□ -0.42
CSMD1-210ENST00000521646 FAM167AQ96KS9 214 aa12.45□□□□□ -0.42
CSMD1-210ENST00000521646 RIT2Q99578 217 aa12.45□□□□□ -0.42
CSMD1-210ENST00000521646 TRAIPQ9BWF2 469 aa12.45□□□□□ -0.42
CSMD1-210ENST00000521646 GLT8D2Q9H1C3 349 aa12.45□□□□□ -0.42
CSMD1-210ENST00000521646 MARCH5Q9NX47 278 aa12.45□□□□□ -0.42
CSMD1-210ENST00000521646 VAV3Q9UKW4 847 aa12.45□□□□□ -0.42
CSMD1-210ENST00000521646 CEP131Q9UPN4 1083 aa12.45□□□□□ -0.42
CSMD1-210ENST00000521646 SORCS3Q9UPU3 1222 aa12.45□□□□□ -0.42
CSMD1-210ENST00000521646 INPP5FQ9Y2H2 1132 aa12.45□□□□□ -0.42
CSMD1-210ENST00000521646 DOCK8Q8NF50 2099 aa12.44□□□□□ -0.42
CSMD1-210ENST00000521646 ARID2Q68CP9 1835 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms