RNA–Protein interactions for RNA: ENST00000520286.5

LSM1-202, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best)

Gene LSM1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-202ENST00000520286 PFKLP17858 780 aa9.17□□□□□ -0.94
LSM1-202ENST00000520286 ADSLP30566 484 aaPredicted RBP9.17□□□□□ -0.94
LSM1-202ENST00000520286 TM4SF4P48230 202 aa9.17□□□□□ -0.94
LSM1-202ENST00000520286 GPSM2P81274 684 aa9.17□□□□□ -0.94
LSM1-202ENST00000520286 RTP5Q14D33 572 aa9.17□□□□□ -0.94
LSM1-202ENST00000520286 GJC2Q5T442 439 aaPredicted RBP9.17□□□□□ -0.94
LSM1-202ENST00000520286 LDHDQ86WU2 507 aa9.17□□□□□ -0.94
LSM1-202ENST00000520286 COL23A1Q86Y22 540 aaPredicted RBP9.17□□□□□ -0.94
LSM1-202ENST00000520286 IFNL2Q8IZJ0 200 aa9.17□□□□□ -0.94
LSM1-202ENST00000520286 HOXB13Q92826 284 aaPredicted RBP9.17□□□□□ -0.94
LSM1-202ENST00000520286 PGBD4Q96DM1 585 aa9.17□□□□□ -0.94
LSM1-202ENST00000520286 CCDC138Q96M89 665 aa9.17□□□□□ -0.94
LSM1-202ENST00000520286 WDR92Q96MX6 357 aa9.17□□□□□ -0.94
LSM1-202ENST00000520286 PPCSQ9HAB8 311 aa9.17□□□□□ -0.94
LSM1-202ENST00000520286 FBXO10Q9UK96 956 aa9.17□□□□□ -0.94
LSM1-202ENST00000520286 NCAPD3P42695 1498 aa9.16□□□□□ -0.94
LSM1-202ENST00000520286 PRAMEF4O60810 478 aa9.16□□□□□ -0.94
LSM1-202ENST00000520286 ENDOD1O94919 500 aa9.16□□□□□ -0.94
LSM1-202ENST00000520286 LTA4HP09960 611 aaKnown RBP9.16□□□□□ -0.94
LSM1-202ENST00000520286 SETSIPP0DME0 302 aa9.16□□□□□ -0.94
LSM1-202ENST00000520286 NOGQ13253 232 aa9.16□□□□□ -0.94
LSM1-202ENST00000520286 ERAP2Q6P179 960 aa9.16□□□□□ -0.94
LSM1-202ENST00000520286 ABHD15Q6UXT9 468 aa9.16□□□□□ -0.94
LSM1-202ENST00000520286 SKAP1Q86WV1 359 aa9.16□□□□□ -0.94
LSM1-202ENST00000520286 C3orf20Q8ND61 904 aa9.16□□□□□ -0.94
LSM1-202ENST00000520286 PLBD2Q8NHP8 589 aa9.16□□□□□ -0.94
LSM1-202ENST00000520286 CLPTM1LQ96KA5 538 aa9.16□□□□□ -0.94
LSM1-202ENST00000520286 C11orf84Q9BUA3 381 aaPredicted RBP9.16□□□□□ -0.94
LSM1-202ENST00000520286 ARMT1Q9H993 441 aa9.16□□□□□ -0.94
LSM1-202ENST00000520286 RSAD1Q9HA92 442 aa9.16□□□□□ -0.94
LSM1-202ENST00000520286 TDP1Q9NUW8 608 aa9.16□□□□□ -0.94
LSM1-202ENST00000520286 FNIP2Q9P278 1114 aa9.16□□□□□ -0.94
LSM1-202ENST00000520286 PCDHA5Q9Y5H7 936 aa9.16□□□□□ -0.94
LSM1-202ENST00000520286 LRRC14BA6NHZ5 514 aa9.15□□□□□ -0.94
LSM1-202ENST00000520286 H0Y858 1186 aa9.15□□□□□ -0.94
LSM1-202ENST00000520286 PHF2O75151 1096 aa9.15□□□□□ -0.94
LSM1-202ENST00000520286 TCEA3O75764 348 aa9.15□□□□□ -0.94
LSM1-202ENST00000520286 HNRNPLP14866 589 aaKnown RBP eCLIP9.15□□□□□ -0.943e-7■□□□□ 9.9
LSM1-202ENST00000520286 HK3P52790 923 aa9.15□□□□□ -0.94
LSM1-202ENST00000520286 GP2P55259 537 aaKnown RBP9.15□□□□□ -0.94
LSM1-202ENST00000520286 RAB1AP62820 205 aa9.15□□□□□ -0.94
LSM1-202ENST00000520286 CDC42EP1Q00587 391 aa9.15□□□□□ -0.94
LSM1-202ENST00000520286 CHAF1AQ13111 956 aaPredicted RBP9.15□□□□□ -0.94
LSM1-202ENST00000520286 STK3Q13188 491 aa9.15□□□□□ -0.94
LSM1-202ENST00000520286 LRP8Q14114 963 aa9.15□□□□□ -0.94
LSM1-202ENST00000520286 POLD3Q15054 466 aaPredicted RBP9.15□□□□□ -0.94
LSM1-202ENST00000520286 NKD2Q969F2 451 aaPredicted RBP9.15□□□□□ -0.94
LSM1-202ENST00000520286 RAB24Q969Q5 203 aa9.15□□□□□ -0.94
LSM1-202ENST00000520286 NT5C1BQ96P26 610 aa9.15□□□□□ -0.94
LSM1-202ENST00000520286 MANSC1Q9H8J5 431 aa9.15□□□□□ -0.94
LSM1-202ENST00000520286 CNTD2Q9H8S5 307 aa9.15□□□□□ -0.94
LSM1-202ENST00000520286 CDC42EP3Q9UKI2 254 aa9.15□□□□□ -0.94
LSM1-202ENST00000520286 ABHD14A-ACY1A0A1B0GW23 586 aa9.14□□□□□ -0.95
LSM1-202ENST00000520286 HYAL3O43820 417 aaPredicted RBP9.14□□□□□ -0.95
LSM1-202ENST00000520286 KNG1P01042 644 aa9.14□□□□□ -0.95
LSM1-202ENST00000520286 CHGBP05060 677 aa9.14□□□□□ -0.95
LSM1-202ENST00000520286 GAAP10253 952 aa9.14□□□□□ -0.95
LSM1-202ENST00000520286 ECHS1P30084 290 aa9.14□□□□□ -0.95
LSM1-202ENST00000520286 TRAPPC10P48553 1259 aa9.14□□□□□ -0.95
LSM1-202ENST00000520286 CDR1P51861 262 aa9.14□□□□□ -0.95
LSM1-202ENST00000520286 UBE3CQ15386 1083 aa9.14□□□□□ -0.95
LSM1-202ENST00000520286 APOA5Q6Q788 366 aa9.14□□□□□ -0.95
LSM1-202ENST00000520286 MPZL3Q6UWV2 235 aa9.14□□□□□ -0.95
LSM1-202ENST00000520286 Q6ZVL8 140 aa9.14□□□□□ -0.95
LSM1-202ENST00000520286 CBLL1Q75N03 491 aa9.14□□□□□ -0.95
LSM1-202ENST00000520286 UNC5BQ8IZJ1 945 aa9.14□□□□□ -0.95
LSM1-202ENST00000520286 TTLL6Q8N841 843 aa9.14□□□□□ -0.95
LSM1-202ENST00000520286 KYQ8NBH2 561 aa9.14□□□□□ -0.95
LSM1-202ENST00000520286 SNX33Q8WV41 574 aa9.14□□□□□ -0.95
LSM1-202ENST00000520286 SGCZQ96LD1 299 aa9.14□□□□□ -0.95
LSM1-202ENST00000520286 PTPN18Q99952 460 aa9.14□□□□□ -0.95
LSM1-202ENST00000520286 C22orf23Q9BZE7 217 aa9.14□□□□□ -0.95
LSM1-202ENST00000520286 MBD1Q9UIS9 605 aaPredicted RBP9.14□□□□□ -0.95
LSM1-202ENST00000520286 BIN1O00499 593 aa9.13□□□□□ -0.95
LSM1-202ENST00000520286 CYP7B1O75881 506 aa9.13□□□□□ -0.95
LSM1-202ENST00000520286 MYF5P13349 255 aa9.13□□□□□ -0.95
LSM1-202ENST00000520286 PIK3CBP42338 1070 aa9.13□□□□□ -0.95
LSM1-202ENST00000520286 SLC6A9P48067 706 aa9.13□□□□□ -0.95
LSM1-202ENST00000520286 STAT5BP51692 787 aa9.13□□□□□ -0.95
LSM1-202ENST00000520286 NKX6-1P78426 367 aaPredicted RBP9.13□□□□□ -0.95
LSM1-202ENST00000520286 FGL2Q14314 439 aa9.13□□□□□ -0.95
LSM1-202ENST00000520286 PIK3C3Q8NEB9 887 aa9.13□□□□□ -0.95
LSM1-202ENST00000520286 SAMD11Q96NU1 681 aa9.13□□□□□ -0.95
LSM1-202ENST00000520286 DMRTA2Q96SC8 542 aa9.13□□□□□ -0.95
LSM1-202ENST00000520286 LMBRD1Q9NUN5 540 aa9.13□□□□□ -0.95
LSM1-202ENST00000520286 STAP2Q9UGK3 403 aa9.13□□□□□ -0.95
LSM1-202ENST00000520286 TPCN1Q9ULQ1 816 aa9.13□□□□□ -0.95
LSM1-202ENST00000520286 SIK3Q9Y2K2 1263 aa9.13□□□□□ -0.95
LSM1-202ENST00000520286 PCDHA3Q9Y5H8 950 aa9.13□□□□□ -0.95
LSM1-202ENST00000520286 RHPN2P1A8MT19 583 aa9.12□□□□□ -0.95
LSM1-202ENST00000520286 RASA4BC9J798 803 aa9.12□□□□□ -0.95
LSM1-202ENST00000520286 H3BUI4 141 aa9.12□□□□□ -0.95
LSM1-202ENST00000520286 DAPK3O43293 454 aa9.12□□□□□ -0.95
LSM1-202ENST00000520286 RASA4O43374 803 aa9.12□□□□□ -0.95
LSM1-202ENST00000520286 SYN1P17600 705 aa9.12□□□□□ -0.95
LSM1-202ENST00000520286 PER3P56645 1201 aa9.12□□□□□ -0.95
LSM1-202ENST00000520286 FOXO4P98177 505 aa9.12□□□□□ -0.95
LSM1-202ENST00000520286 EIF4HQ15056 248 aaKnown RBP9.12□□□□□ -0.95
LSM1-202ENST00000520286 MST1LQ2TV78 715 aa9.12□□□□□ -0.95
LSM1-202ENST00000520286 KHDC1Q4VXA5 237 aaKnown RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms