RNA–Protein interactions for RNA: ENST00000520058.1

SREK1-207, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-207ENST00000520058 ZNF558Q96NG5 402 aa20.27■□□□□ 0.84
SREK1-207ENST00000520058 NTPCRQ9BSD7 190 aaKnown RBP20.27■□□□□ 0.84
SREK1-207ENST00000520058 MRPL4Q9BYD3 311 aaKnown RBP20.27■□□□□ 0.84
SREK1-207ENST00000520058 LRRC27Q9C0I9 530 aa20.27■□□□□ 0.84
SREK1-207ENST00000520058 BLOC1S4Q9NUP1 217 aa20.27■□□□□ 0.84
SREK1-207ENST00000520058 PUF60Q9UHX1 559 aaKnown RBP20.27■□□□□ 0.84
SREK1-207ENST00000520058 CHD7Q9P2D1 2997 aa20.26■□□□□ 0.83
SREK1-207ENST00000520058 CDH23Q9H251 3354 aa20.26■□□□□ 0.83
SREK1-207ENST00000520058 B4GALT5O43286 388 aa20.26■□□□□ 0.83
SREK1-207ENST00000520058 NPTXRO95502 500 aa20.26■□□□□ 0.83
SREK1-207ENST00000520058 UBE3AQ05086 875 aa20.26■□□□□ 0.83
SREK1-207ENST00000520058 BMS1Q14692 1282 aaKnown RBP20.26■□□□□ 0.83
SREK1-207ENST00000520058 DCAF4L1Q3SXM0 396 aa20.26■□□□□ 0.83
SREK1-207ENST00000520058 LONRF3Q496Y0 759 aa20.26■□□□□ 0.83
SREK1-207ENST00000520058 UBXN11Q5T124 520 aa20.26■□□□□ 0.83
SREK1-207ENST00000520058 ATF7IP2Q5U623 682 aa20.26■□□□□ 0.83
SREK1-207ENST00000520058 KLHL23Q8NBE8 558 aa20.26■□□□□ 0.83
SREK1-207ENST00000520058 COLGALT1Q8NBJ5 622 aa20.26■□□□□ 0.83
SREK1-207ENST00000520058 PYM1Q9BRP8 204 aaKnown RBP20.26■□□□□ 0.83
SREK1-207ENST00000520058 CCDC113Q9H0I3 377 aa20.26■□□□□ 0.83
SREK1-207ENST00000520058 ZHX3Q9H4I2 956 aa20.26■□□□□ 0.83
SREK1-207ENST00000520058 PARVGQ9HBI0 331 aa20.26■□□□□ 0.83
SREK1-207ENST00000520058 FAM13BQ9NYF5 915 aa20.26■□□□□ 0.83
SREK1-207ENST00000520058 PLAGL2Q9UPG8 496 aa20.26■□□□□ 0.83
SREK1-207ENST00000520058 GIT1Q9Y2X7 761 aa20.26■□□□□ 0.83
SREK1-207ENST00000520058 TRIP11Q15643 1979 aa20.26■□□□□ 0.83
SREK1-207ENST00000520058 SFI1A8K8P3 1242 aa20.25■□□□□ 0.83
SREK1-207ENST00000520058 SLC16A4O15374 487 aa20.25■□□□□ 0.83
SREK1-207ENST00000520058 NR1I2O75469 434 aa20.25■□□□□ 0.83
SREK1-207ENST00000520058 OFD1O75665 1012 aa20.25■□□□□ 0.83
SREK1-207ENST00000520058 NUCB2P80303 420 aa20.25■□□□□ 0.83
SREK1-207ENST00000520058 DNM1Q05193 864 aaKnown RBP20.25■□□□□ 0.83
SREK1-207ENST00000520058 MAPK7Q13164 816 aa20.25■□□□□ 0.83
SREK1-207ENST00000520058 KCNT2Q6UVM3 1135 aa20.25■□□□□ 0.83
SREK1-207ENST00000520058 USP49Q70CQ1 688 aa20.25■□□□□ 0.83
SREK1-207ENST00000520058 DAW1Q8N136 415 aa20.25■□□□□ 0.83
SREK1-207ENST00000520058 MYCT1Q8N699 235 aa20.25■□□□□ 0.83
SREK1-207ENST00000520058 REEP2Q9BRK0 252 aa20.25■□□□□ 0.83
SREK1-207ENST00000520058 KIFC3Q9BVG8 833 aa20.25■□□□□ 0.83
SREK1-207ENST00000520058 EIF2AQ9BY44 585 aaKnown RBP20.25■□□□□ 0.83
SREK1-207ENST00000520058 CUEDC2Q9H467 287 aa20.25■□□□□ 0.83
SREK1-207ENST00000520058 CWH43Q9H720 699 aa20.25■□□□□ 0.83
SREK1-207ENST00000520058 RNF19AQ9NV58 838 aa20.25■□□□□ 0.83
SREK1-207ENST00000520058 ARHGAP28Q9P2N2 729 aa20.25■□□□□ 0.83
SREK1-207ENST00000520058 ZMYM2Q9UBW7 1377 aa20.24■□□□□ 0.83
SREK1-207ENST00000520058 ATG2AQ2TAZ0 1938 aa20.24■□□□□ 0.83
SREK1-207ENST00000520058 LINC00271P0C7V0 271 aa20.24■□□□□ 0.83
SREK1-207ENST00000520058 AMPD3Q01432 767 aa20.24■□□□□ 0.83
SREK1-207ENST00000520058 ARSHQ5FYA8 562 aa20.24■□□□□ 0.83
SREK1-207ENST00000520058 AGMOQ6ZNB7 445 aa20.24■□□□□ 0.83
SREK1-207ENST00000520058 SMG8Q8ND04 991 aaKnown RBP20.24■□□□□ 0.83
SREK1-207ENST00000520058 RPS6KC1Q96S38 1066 aa20.24■□□□□ 0.83
SREK1-207ENST00000520058 TCHPQ9BT92 498 aa20.24■□□□□ 0.83
SREK1-207ENST00000520058 APOL6Q9BWW8 343 aa20.24■□□□□ 0.83
SREK1-207ENST00000520058 NSUN3Q9H649 340 aaKnown RBP20.24■□□□□ 0.83
SREK1-207ENST00000520058 ALG13Q9NP73 1137 aaKnown RBP20.24■□□□□ 0.83
SREK1-207ENST00000520058 TBC1D13Q9NVG8 400 aa20.24■□□□□ 0.83
SREK1-207ENST00000520058 SPG21Q9NZD8 308 aa20.24■□□□□ 0.83
SREK1-207ENST00000520058 PARP2Q9UGN5 583 aa20.24■□□□□ 0.83
SREK1-207ENST00000520058 GRM6O15303 877 aa20.23■□□□□ 0.83
SREK1-207ENST00000520058 ZC3H11AO75152 810 aaKnown RBP eCLIP20.23■□□□□ 0.83
SREK1-207ENST00000520058 FGF18O76093 207 aa20.23■□□□□ 0.83
SREK1-207ENST00000520058 GIT2Q14161 759 aa20.23■□□□□ 0.83
SREK1-207ENST00000520058 PDE12Q6L8Q7 609 aaKnown RBP20.23■□□□□ 0.83
SREK1-207ENST00000520058 LRRC55Q6ZSA7 311 aa20.23■□□□□ 0.83
SREK1-207ENST00000520058 FAM178BQ8IXR5 827 aa20.23■□□□□ 0.83
SREK1-207ENST00000520058 PDILTQ8N807 584 aa20.23■□□□□ 0.83
SREK1-207ENST00000520058 IQUBQ8NA54 791 aa20.23■□□□□ 0.83
SREK1-207ENST00000520058 SPATA32Q96LK8 384 aa20.23■□□□□ 0.83
SREK1-207ENST00000520058 PANK2Q9BZ23 570 aa20.23■□□□□ 0.83
SREK1-207ENST00000520058 SCAND2PQ9GZW5 306 aaPredicted RBP20.23■□□□□ 0.83
SREK1-207ENST00000520058 PDZD7Q9H5P4 517 aa20.23■□□□□ 0.83
SREK1-207ENST00000520058 STK39Q9UEW8 545 aa20.23■□□□□ 0.83
SREK1-207ENST00000520058 RCOR1Q9UKL0 485 aa20.23■□□□□ 0.83
SREK1-207ENST00000520058 LZTS1Q9Y250 596 aa20.23■□□□□ 0.83
SREK1-207ENST00000520058 TNFSF13BQ9Y275 285 aa20.23■□□□□ 0.83
SREK1-207ENST00000520058 NPHP3-ACAD11A0A0J9YXS1 232 aa20.22■□□□□ 0.83
SREK1-207ENST00000520058 NCK2O43639 380 aa20.22■□□□□ 0.83
SREK1-207ENST00000520058 TRAK2O60296 914 aa20.22■□□□□ 0.83
SREK1-207ENST00000520058 ITGB1P05556 798 aa20.22■□□□□ 0.83
SREK1-207ENST00000520058 PLCB3Q01970 1234 aa20.22■□□□□ 0.83
SREK1-207ENST00000520058 CACNB1Q02641 598 aaPredicted RBP20.22■□□□□ 0.83
SREK1-207ENST00000520058 AAK1Q2M2I8 961 aa20.22■□□□□ 0.83
SREK1-207ENST00000520058 CDR2LQ86X02 465 aaPredicted RBP20.22■□□□□ 0.83
SREK1-207ENST00000520058 SPPL3Q8TCT6 385 aa20.22■□□□□ 0.83
SREK1-207ENST00000520058 MICAL1Q8TDZ2 1067 aa20.22■□□□□ 0.83
SREK1-207ENST00000520058 BICD1Q96G01 975 aa20.22■□□□□ 0.83
SREK1-207ENST00000520058 TMEM169Q96HH4 297 aa20.22■□□□□ 0.83
SREK1-207ENST00000520058 GBP3Q9H0R5 595 aa20.22■□□□□ 0.83
SREK1-207ENST00000520058 COG5Q9UP83 839 aa20.22■□□□□ 0.83
SREK1-207ENST00000520058 ARL5CA6NH57 179 aa20.21■□□□□ 0.83
SREK1-207ENST00000520058 MEIS3P2A8K0S8 358 aa20.21■□□□□ 0.83
SREK1-207ENST00000520058 K7ENM7 598 aa20.21■□□□□ 0.83
SREK1-207ENST00000520058 ALDH2P05091 517 aa20.21■□□□□ 0.83
SREK1-207ENST00000520058 GAP43P17677 238 aa20.21■□□□□ 0.83
SREK1-207ENST00000520058 ZNF131P52739 623 aa20.21■□□□□ 0.83
SREK1-207ENST00000520058 BCAR1P56945 870 aa20.21■□□□□ 0.83
SREK1-207ENST00000520058 DYMQ7RTS9 669 aa20.21■□□□□ 0.83
SREK1-207ENST00000520058 HAUS6Q7Z4H7 955 aa20.21■□□□□ 0.83
SREK1-207ENST00000520058 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms