RNA–Protein interactions for RNA: ENST00000519895.5

MCF2-208, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-208ENST00000519895 FGD1P98174 961 aa3.18□□□□□ -1.9
MCF2-208ENST00000519895 SPIRE1Q08AE8 756 aa3.18□□□□□ -1.9
MCF2-208ENST00000519895 ZNF252P-AS1Q0IIN9 211 aa3.18□□□□□ -1.9
MCF2-208ENST00000519895 IKQ13123 557 aaPredicted RBP3.18□□□□□ -1.9
MCF2-208ENST00000519895 MTMR1Q13613 665 aa3.18□□□□□ -1.9
MCF2-208ENST00000519895 MYBPC2Q14324 1141 aa3.18□□□□□ -1.9
MCF2-208ENST00000519895 PDE12Q6L8Q7 609 aaKnown RBP3.18□□□□□ -1.9
MCF2-208ENST00000519895 RASGRP2Q7LDG7 609 aa3.18□□□□□ -1.9
MCF2-208ENST00000519895 APBB1IPQ7Z5R6 666 aaPredicted RBP3.18□□□□□ -1.9
MCF2-208ENST00000519895 SRGAP1Q7Z6B7 1085 aa3.18□□□□□ -1.9
MCF2-208ENST00000519895 SPICE1Q8N0Z3 855 aa3.18□□□□□ -1.9
MCF2-208ENST00000519895 CELF5Q8N6W0 485 aaKnown RBP3.18□□□□□ -1.9
MCF2-208ENST00000519895 TTC13Q8NBP0 860 aa3.18□□□□□ -1.9
MCF2-208ENST00000519895 OR6J1Q8NGC5 347 aa3.18□□□□□ -1.9
MCF2-208ENST00000519895 PRR7Q8TB68 274 aa3.18□□□□□ -1.9
MCF2-208ENST00000519895 ZNF396Q96N95 335 aaPredicted RBP3.18□□□□□ -1.9
MCF2-208ENST00000519895 OXCT2Q9BYC2 517 aaPredicted RBP3.18□□□□□ -1.9
MCF2-208ENST00000519895 INO80BQ9C086 356 aaPredicted RBP3.18□□□□□ -1.9
MCF2-208ENST00000519895 JPH1Q9HDC5 661 aaPredicted RBP3.18□□□□□ -1.9
MCF2-208ENST00000519895 INCENPQ9NQS7 918 aa3.18□□□□□ -1.9
MCF2-208ENST00000519895 RTEL1Q9NZ71 1219 aa3.18□□□□□ -1.9
MCF2-208ENST00000519895 SEL1LQ9UBV2 794 aa3.18□□□□□ -1.9
MCF2-208ENST00000519895 VAV3Q9UKW4 847 aa3.18□□□□□ -1.9
MCF2-208ENST00000519895 NR2E1Q9Y466 385 aa3.18□□□□□ -1.9
MCF2-208ENST00000519895 DOCK5Q9H7D0 1870 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 KIF26AQ9ULI4 1882 aaPredicted RBP3.17□□□□□ -1.9
MCF2-208ENST00000519895 GSTTP1A0A1W2PQM5 241 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 ANKRD33BA6NCL7 494 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 H3BQ06 376 aaPredicted RBP3.17□□□□□ -1.9
MCF2-208ENST00000519895 HOXA2O43364 376 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 PIGRP01833 764 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 ADRB2P07550 413 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 TXNP10599 105 aaKnown RBP3.17□□□□□ -1.9
MCF2-208ENST00000519895 CYP2B6P20813 491 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 RPA1P27694 616 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 CCND3P30281 292 aaPredicted RBP3.17□□□□□ -1.9
MCF2-208ENST00000519895 IL12RB1P42701 662 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 RAB27AP51159 221 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 NUCB2P80303 420 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 FAM189BP81408 668 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 RHDQ02161 417 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 PAK2Q13177 524 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 TMEM119Q4V9L6 283 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 CNKSR3Q6P9H4 555 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 CYP26C1Q6V0L0 522 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 OTUD6AQ7L8S5 288 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 DPH6Q7L8W6 267 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 METTL3Q86U44 580 aaKnown RBP3.17□□□□□ -1.9
MCF2-208ENST00000519895 CCDC84Q86UT8 332 aaPredicted RBP3.17□□□□□ -1.9
MCF2-208ENST00000519895 MICU3Q86XE3 530 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 CLEC10AQ8IUN9 316 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 KIAA1958Q8N8K9 716 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 C1orf216Q8TAB5 229 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 KAT2BQ92831 832 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 C8orf76Q96K31 380 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 PRIMPOLQ96LW4 560 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 UBA5Q9GZZ9 404 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 TMEM134Q9H6X4 195 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 UBN1Q9NPG3 1134 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 SEMA4GQ9NTN9 838 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 CNTNAP2Q9UHC6 1331 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 ARHGEF17Q96PE2 2063 aaPredicted RBP3.17□□□□□ -1.9
MCF2-208ENST00000519895 PIEZO2Q9H5I5 2752 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 CCDC194A0A1B0GVG4 234 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 A0A1W2PQ27 194 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 A0A1W2PQ64 194 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 A0A1W2PQD8 194 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 LGALS2P05162 132 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 ACTN1P12814 892 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 ITGB5P18084 799 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 GUCY2CP25092 1073 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 RDXP35241 583 aaKnown RBP3.17□□□□□ -1.9
MCF2-208ENST00000519895 ADD1P35611 737 aaKnown RBP3.17□□□□□ -1.9
MCF2-208ENST00000519895 SLC16A2P36021 539 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 SLC4A3P48751 1232 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 FOXC1Q12948 553 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 TMEM266Q2M3C6 531 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 PKDCCQ504Y2 493 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 IER5Q5VY09 327 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 CDCA2Q69YH5 1023 aaPredicted RBP3.17□□□□□ -1.9
MCF2-208ENST00000519895 TYW1BQ6NUM6 668 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 NOL8Q76FK4 1167 aaKnown RBP3.17□□□□□ -1.9
MCF2-208ENST00000519895 PLA2G4DQ86XP0 818 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 C1orf210Q8IVY1 113 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 SUSD6Q92537 303 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 HSD17B14Q9BPX1 270 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 ZKSCAN3Q9BRR0 538 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 NTPCRQ9BSD7 190 aaKnown RBP3.17□□□□□ -1.9
MCF2-208ENST00000519895 NOC4LQ9BVI4 516 aaKnown RBP3.17□□□□□ -1.9
MCF2-208ENST00000519895 SLC26A6Q9BXS9 759 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 C2orf40Q9H1Z8 148 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 CCDC86Q9H6F5 360 aaKnown RBP3.17□□□□□ -1.9
MCF2-208ENST00000519895 KCNH7Q9NS40 1196 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.17□□□□□ -1.9
MCF2-208ENST00000519895 DKK3Q9UBP4 350 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 ODF2LQ9ULJ1 636 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 MAN2B2Q9Y2E5 1009 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 DAAM1Q9Y4D1 1078 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 PTPRSQ13332 1948 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 MYH9P35579 1960 aaKnown RBP3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms