RNA–Protein interactions for RNA: ENST00000519768.5

CTNNA1-218, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-218ENST00000519768 NSUN4Q96CB9 384 aaKnown RBP5.86□□□□□ -1.47
CTNNA1-218ENST00000519768 SPATC1LQ9H0A9 340 aa5.86□□□□□ -1.47
CTNNA1-218ENST00000519768 SIL1Q9H173 461 aa5.86□□□□□ -1.47
CTNNA1-218ENST00000519768 HIPK3Q9H422 1215 aa5.86□□□□□ -1.47
CTNNA1-218ENST00000519768 C9orf78Q9NZ63 289 aaPredicted RBP5.86□□□□□ -1.47
CTNNA1-218ENST00000519768 GPR179Q6PRD1 2367 aa5.85□□□□□ -1.47
CTNNA1-218ENST00000519768 KIF16BQ96L93 1317 aa5.85□□□□□ -1.47
CTNNA1-218ENST00000519768 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.85□□□□□ -1.47
CTNNA1-218ENST00000519768 EYA2O00167 538 aa5.85□□□□□ -1.47
CTNNA1-218ENST00000519768 SMAD7O15105 426 aaKnown RBP5.85□□□□□ -1.47
CTNNA1-218ENST00000519768 B4GALT4O60513 344 aa5.85□□□□□ -1.47
CTNNA1-218ENST00000519768 LTBRP36941 435 aa5.85□□□□□ -1.47
CTNNA1-218ENST00000519768 ID4P47928 161 aa5.85□□□□□ -1.47
CTNNA1-218ENST00000519768 DYNLL1P63167 89 aaKnown RBP5.85□□□□□ -1.47
CTNNA1-218ENST00000519768 CCNA1P78396 465 aa5.85□□□□□ -1.47
CTNNA1-218ENST00000519768 TMEM132BQ14DG7 1078 aa5.85□□□□□ -1.47
CTNNA1-218ENST00000519768 CLUL1Q15846 466 aa5.85□□□□□ -1.47
CTNNA1-218ENST00000519768 CXCL17Q6UXB2 119 aa5.85□□□□□ -1.47
CTNNA1-218ENST00000519768 NFXL1Q6ZNB6 911 aa5.85□□□□□ -1.47
CTNNA1-218ENST00000519768 TMPRSS7Q7RTY8 843 aa5.85□□□□□ -1.47
CTNNA1-218ENST00000519768 SIAH1Q8IUQ4 282 aa5.85□□□□□ -1.47
CTNNA1-218ENST00000519768 TEX11Q8IYF3 940 aa5.85□□□□□ -1.47
CTNNA1-218ENST00000519768 TGFBRAP1Q8WUH2 860 aa5.85□□□□□ -1.47
CTNNA1-218ENST00000519768 FGD4Q96M96 766 aa5.85□□□□□ -1.47
CTNNA1-218ENST00000519768 TANGO6Q9C0B7 1094 aa5.85□□□□□ -1.47
CTNNA1-218ENST00000519768 MKRN2Q9H000 416 aaKnown RBP5.85□□□□□ -1.47
CTNNA1-218ENST00000519768 GPATCH2Q9NW75 528 aa5.85□□□□□ -1.47
CTNNA1-218ENST00000519768 PRR13Q9NZ81 148 aa5.85□□□□□ -1.47
CTNNA1-218ENST00000519768 PI4KBQ9UBF8 816 aa5.85□□□□□ -1.47
CTNNA1-218ENST00000519768 PA2G4Q9UQ80 394 aaKnown RBP5.85□□□□□ -1.47
CTNNA1-218ENST00000519768 TRIP12Q14669 1992 aaPredicted RBP5.85□□□□□ -1.47
CTNNA1-218ENST00000519768 ASPMQ8IZT6 3477 aa5.85□□□□□ -1.47
CTNNA1-218ENST00000519768 MYO5AQ9Y4I1 1855 aaKnown RBP5.85□□□□□ -1.47
CTNNA1-218ENST00000519768 ZNF236Q9UL36 1845 aa5.85□□□□□ -1.47
CTNNA1-218ENST00000519768 ELP1O95163 1332 aa5.84□□□□□ -1.47
CTNNA1-218ENST00000519768 COL11A1P12107 1806 aaPredicted RBP5.84□□□□□ -1.47
CTNNA1-218ENST00000519768 TMEM221A6NGB7 291 aa5.84□□□□□ -1.47
CTNNA1-218ENST00000519768 C9IYK1 514 aa5.84□□□□□ -1.47
CTNNA1-218ENST00000519768 H3BS24 57 aa5.84□□□□□ -1.47
CTNNA1-218ENST00000519768 M0R296 226 aa5.84□□□□□ -1.47
CTNNA1-218ENST00000519768 STRNO43815 780 aa5.84□□□□□ -1.47
CTNNA1-218ENST00000519768 C6orf222P0C671 652 aaPredicted RBP5.84□□□□□ -1.47
CTNNA1-218ENST00000519768 ATP2B1P20020 1258 aa5.84□□□□□ -1.47
CTNNA1-218ENST00000519768 DEFB103AP81534 67 aa5.84□□□□□ -1.47
CTNNA1-218ENST00000519768 BNIP3Q12983 259 aa5.84□□□□□ -1.47
CTNNA1-218ENST00000519768 AUHQ13825 339 aaKnown RBP5.84□□□□□ -1.47
CTNNA1-218ENST00000519768 PLS1Q14651 629 aa5.84□□□□□ -1.47
CTNNA1-218ENST00000519768 ATP2B3Q16720 1220 aa5.84□□□□□ -1.47
CTNNA1-218ENST00000519768 GAB4Q2WGN9 574 aa5.84□□□□□ -1.47
CTNNA1-218ENST00000519768 PPFIBP1Q86W92 1011 aa5.84□□□□□ -1.47
CTNNA1-218ENST00000519768 DZIP1Q86YF9 867 aaKnown RBP5.84□□□□□ -1.47
CTNNA1-218ENST00000519768 WFDC3Q8IUB2 231 aa5.84□□□□□ -1.47
CTNNA1-218ENST00000519768 HERC6Q8IVU3 1022 aa5.84□□□□□ -1.47
CTNNA1-218ENST00000519768 AGBL5Q8NDL9 886 aa5.84□□□□□ -1.47
CTNNA1-218ENST00000519768 NUP133Q8WUM0 1156 aa5.84□□□□□ -1.47
CTNNA1-218ENST00000519768 ATOH1Q92858 354 aaPredicted RBP5.84□□□□□ -1.47
CTNNA1-218ENST00000519768 UBE2FQ969M7 185 aa5.84□□□□□ -1.47
CTNNA1-218ENST00000519768 RMDN1Q96DB5 314 aa5.84□□□□□ -1.47
CTNNA1-218ENST00000519768 ZNF512BQ96KM6 892 aaPredicted RBP5.84□□□□□ -1.47
CTNNA1-218ENST00000519768 FBXO28Q9NVF7 368 aa5.84□□□□□ -1.47
CTNNA1-218ENST00000519768 ACTR10Q9NZ32 417 aa5.84□□□□□ -1.47
CTNNA1-218ENST00000519768 LMCD1Q9NZU5 365 aa5.84□□□□□ -1.47
CTNNA1-218ENST00000519768 HMG20BQ9P0W2 317 aa5.84□□□□□ -1.47
CTNNA1-218ENST00000519768 HERC5Q9UII4 1024 aaKnown RBP5.84□□□□□ -1.47
CTNNA1-218ENST00000519768 DENND2AQ9ULE3 1009 aa5.84□□□□□ -1.47
CTNNA1-218ENST00000519768 RIPK3Q9Y572 518 aa5.84□□□□□ -1.47
CTNNA1-218ENST00000519768 FLNBO75369 2602 aaKnown RBP5.84□□□□□ -1.47
CTNNA1-218ENST00000519768 ZZEF1O43149 2961 aa5.84□□□□□ -1.48
CTNNA1-218ENST00000519768 FRYQ5TBA9 3013 aa5.83□□□□□ -1.48
CTNNA1-218ENST00000519768 MYO10Q9HD67 2058 aa5.83□□□□□ -1.48
CTNNA1-218ENST00000519768 A0A0U1RQG5 324 aaPredicted RBP5.83□□□□□ -1.48
CTNNA1-218ENST00000519768 PRR23AA6NEV1 266 aa5.83□□□□□ -1.48
CTNNA1-218ENST00000519768 CD8BP10966 210 aa5.83□□□□□ -1.48
CTNNA1-218ENST00000519768 AKR1A1P14550 325 aa5.83□□□□□ -1.48
CTNNA1-218ENST00000519768 GTF2F1P35269 517 aaKnown RBP eCLIP5.83□□□□□ -1.48
CTNNA1-218ENST00000519768 GJA9P57773 515 aa5.83□□□□□ -1.48
CTNNA1-218ENST00000519768 SLC7A5Q01650 507 aa5.83□□□□□ -1.48
CTNNA1-218ENST00000519768 EXOSC9Q06265 439 aaKnown RBP5.83□□□□□ -1.48
CTNNA1-218ENST00000519768 NMIQ13287 307 aaPredicted RBP5.83□□□□□ -1.48
CTNNA1-218ENST00000519768 COG2Q14746 738 aa5.83□□□□□ -1.48
CTNNA1-218ENST00000519768 SEPT2Q15019 361 aa5.83□□□□□ -1.48
CTNNA1-218ENST00000519768 RAB3GAP1Q15042 981 aa5.83□□□□□ -1.48
CTNNA1-218ENST00000519768 GNPTABQ3T906 1256 aa5.83□□□□□ -1.48
CTNNA1-218ENST00000519768 HERC4Q5GLZ8 1057 aaPredicted RBP5.83□□□□□ -1.48
CTNNA1-218ENST00000519768 TATDN1Q6P1N9 297 aa5.83□□□□□ -1.48
CTNNA1-218ENST00000519768 BMP8AQ7Z5Y6 402 aa5.83□□□□□ -1.48
CTNNA1-218ENST00000519768 TSPYL5Q86VY4 417 aaPredicted RBP5.83□□□□□ -1.48
CTNNA1-218ENST00000519768 FOXP4Q8IVH2 680 aaPredicted RBP5.83□□□□□ -1.48
CTNNA1-218ENST00000519768 CCDC144CPQ8IYA2 1237 aa5.83□□□□□ -1.48
CTNNA1-218ENST00000519768 FLCNQ8NFG4 579 aa5.83□□□□□ -1.48
CTNNA1-218ENST00000519768 SYTL5Q8TDW5 730 aaPredicted RBP5.83□□□□□ -1.48
CTNNA1-218ENST00000519768 EDAQ92838 391 aa5.83□□□□□ -1.48
CTNNA1-218ENST00000519768 GLT1D1Q96MS3 346 aa5.83□□□□□ -1.48
CTNNA1-218ENST00000519768 C17orf80Q9BSJ5 609 aa5.83□□□□□ -1.48
CTNNA1-218ENST00000519768 PRDM14Q9GZV8 571 aa5.83□□□□□ -1.48
CTNNA1-218ENST00000519768 KATNBL1Q9H079 304 aa5.83□□□□□ -1.48
CTNNA1-218ENST00000519768 KIAA1683Q9H0B3 1180 aa5.83□□□□□ -1.48
CTNNA1-218ENST00000519768 USP44Q9H0E7 712 aa5.83□□□□□ -1.48
CTNNA1-218ENST00000519768 UPF3AQ9H1J1 476 aaKnown RBP5.83□□□□□ -1.48
CTNNA1-218ENST00000519768 ATP13A1Q9HD20 1204 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms