RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 ZNF577Q9BSK1 485 aa17.83■□□□□ 0.45
PCDHGA11-202ENST00000518882 KCND2Q9NZV8 630 aa17.83■□□□□ 0.45
PCDHGA11-202ENST00000518882 TRPC6Q9Y210 931 aa17.83■□□□□ 0.45
PCDHGA11-202ENST00000518882 PTPN22Q9Y2R2 807 aa17.83■□□□□ 0.45
PCDHGA11-202ENST00000518882 PFASO15067 1338 aa17.83■□□□□ 0.44
PCDHGA11-202ENST00000518882 TRIM37O94972 964 aa17.83■□□□□ 0.44
PCDHGA11-202ENST00000518882 KCNJ1P48048 391 aa17.83■□□□□ 0.44
PCDHGA11-202ENST00000518882 VAMP7P51809 220 aa17.83■□□□□ 0.44
PCDHGA11-202ENST00000518882 MKRN4PQ13434 485 aaPredicted RBP17.83■□□□□ 0.44
PCDHGA11-202ENST00000518882 RBM26Q5T8P6 1007 aaKnown RBP17.83■□□□□ 0.44
PCDHGA11-202ENST00000518882 B3GNT9Q6UX72 402 aa17.83■□□□□ 0.44
PCDHGA11-202ENST00000518882 NOP9Q86U38 636 aaKnown RBP17.83■□□□□ 0.44
PCDHGA11-202ENST00000518882 GPATCH11Q8N954 259 aa17.83■□□□□ 0.44
PCDHGA11-202ENST00000518882 CCDC197Q8NCU1 140 aa17.83■□□□□ 0.44
PCDHGA11-202ENST00000518882 MYCBPQ99417 103 aaPredicted RBP17.83■□□□□ 0.44
PCDHGA11-202ENST00000518882 TDRD3Q9H7E2 651 aaKnown RBP17.83■□□□□ 0.44
PCDHGA11-202ENST00000518882 CNOT7Q9UIV1 285 aaKnown RBP17.83■□□□□ 0.44
PCDHGA11-202ENST00000518882 ARHGEF35A5YM69 484 aa17.82■□□□□ 0.44
PCDHGA11-202ENST00000518882 DDX39AO00148 427 aaKnown RBP17.82■□□□□ 0.44
PCDHGA11-202ENST00000518882 RIPK2O43353 540 aa17.82■□□□□ 0.44
PCDHGA11-202ENST00000518882 RTN2O75298 545 aa17.82■□□□□ 0.44
PCDHGA11-202ENST00000518882 POLR2MP0CAP2 368 aa17.82■□□□□ 0.44
PCDHGA11-202ENST00000518882 HSPA6P17066 643 aa17.82■□□□□ 0.44
PCDHGA11-202ENST00000518882 XRCC4Q13426 336 aa17.82■□□□□ 0.44
PCDHGA11-202ENST00000518882 SIX1Q15475 284 aaPredicted RBP17.82■□□□□ 0.44
PCDHGA11-202ENST00000518882 DACT2Q5SW24 774 aa17.82■□□□□ 0.44
PCDHGA11-202ENST00000518882 PODNQ7Z5L7 613 aa17.82■□□□□ 0.44
PCDHGA11-202ENST00000518882 PIGWQ7Z7B1 504 aa17.82■□□□□ 0.44
PCDHGA11-202ENST00000518882 EPS8L1Q8TE68 723 aa17.82■□□□□ 0.44
PCDHGA11-202ENST00000518882 RPS6KC1Q96S38 1066 aa17.82■□□□□ 0.44
PCDHGA11-202ENST00000518882 NOCTQ9UK39 431 aaKnown RBP17.82■□□□□ 0.44
PCDHGA11-202ENST00000518882 CCT8L1PA6NM43 557 aa17.82■□□□□ 0.44
PCDHGA11-202ENST00000518882 PODXLO00592 558 aa17.82■□□□□ 0.44
PCDHGA11-202ENST00000518882 PPIP5K2O43314 1243 aa17.82■□□□□ 0.44
PCDHGA11-202ENST00000518882 AGTP01019 485 aa17.82■□□□□ 0.44
PCDHGA11-202ENST00000518882 GHRP10912 638 aa17.82■□□□□ 0.44
PCDHGA11-202ENST00000518882 NPR1P16066 1061 aa17.82■□□□□ 0.44
PCDHGA11-202ENST00000518882 ADCY2Q08462 1091 aa17.82■□□□□ 0.44
PCDHGA11-202ENST00000518882 C6orf118Q5T5N4 469 aa17.82■□□□□ 0.44
PCDHGA11-202ENST00000518882 SEL1L2Q5TEA6 688 aa17.82■□□□□ 0.44
PCDHGA11-202ENST00000518882 INTS8Q75QN2 995 aaKnown RBP17.82■□□□□ 0.44
PCDHGA11-202ENST00000518882 COL23A1Q86Y22 540 aaPredicted RBP17.82■□□□□ 0.44
PCDHGA11-202ENST00000518882 ACER1Q8TDN7 264 aa17.82■□□□□ 0.44
PCDHGA11-202ENST00000518882 POP1Q99575 1024 aaKnown RBP17.82■□□□□ 0.44
PCDHGA11-202ENST00000518882 MRIQ9BWK5 157 aa17.82■□□□□ 0.44
PCDHGA11-202ENST00000518882 INTS9Q9NV88 658 aaKnown RBP17.82■□□□□ 0.44
PCDHGA11-202ENST00000518882 TPX2Q9ULW0 747 aaKnown RBP17.82■□□□□ 0.44
PCDHGA11-202ENST00000518882 ASAP2O43150 1006 aa17.81■□□□□ 0.44
PCDHGA11-202ENST00000518882 VIL1P09327 827 aaKnown RBP17.81■□□□□ 0.44
PCDHGA11-202ENST00000518882 RARAP10276 462 aa17.81■□□□□ 0.44
PCDHGA11-202ENST00000518882 MUTP22033 750 aa17.81■□□□□ 0.44
PCDHGA11-202ENST00000518882 MAP2K2P36507 400 aa17.81■□□□□ 0.44
PCDHGA11-202ENST00000518882 COILP38432 576 aaPredicted RBP17.81■□□□□ 0.44
PCDHGA11-202ENST00000518882 AUHQ13825 339 aaKnown RBP17.81■□□□□ 0.44
PCDHGA11-202ENST00000518882 LLGL1Q15334 1064 aa17.81■□□□□ 0.44
PCDHGA11-202ENST00000518882 SNCBQ16143 134 aa17.81■□□□□ 0.44
PCDHGA11-202ENST00000518882 CYP1B1Q16678 543 aa17.81■□□□□ 0.44
PCDHGA11-202ENST00000518882 CCDC38Q502W7 563 aa17.81■□□□□ 0.44
PCDHGA11-202ENST00000518882 TNFAIP8L3Q5GJ75 292 aa17.81■□□□□ 0.44
PCDHGA11-202ENST00000518882 P3H4Q92791 437 aa17.81■□□□□ 0.44
PCDHGA11-202ENST00000518882 ART4Q93070 314 aa17.81■□□□□ 0.44
PCDHGA11-202ENST00000518882 WDR11Q9BZH6 1224 aa17.81■□□□□ 0.44
PCDHGA11-202ENST00000518882 MTRF1LQ9UGC7 380 aaKnown RBP17.81■□□□□ 0.44
PCDHGA11-202ENST00000518882 DBR1Q9UK59 544 aaKnown RBP17.81■□□□□ 0.44
PCDHGA11-202ENST00000518882 IPO5O00410 1097 aaKnown RBP17.81■□□□□ 0.44
PCDHGA11-202ENST00000518882 DNAJC8O75937 253 aaPredicted RBP17.81■□□□□ 0.44
PCDHGA11-202ENST00000518882 IFNAR2P48551 515 aa17.81■□□□□ 0.44
PCDHGA11-202ENST00000518882 PADI6Q6TGC4 694 aa17.81■□□□□ 0.44
PCDHGA11-202ENST00000518882 SLC47A2Q86VL8 602 aa17.81■□□□□ 0.44
PCDHGA11-202ENST00000518882 SLC13A5Q86YT5 568 aaPredicted RBP17.81■□□□□ 0.44
PCDHGA11-202ENST00000518882 CCDC105Q8IYK2 499 aa17.81■□□□□ 0.44
PCDHGA11-202ENST00000518882 KREMEN1Q96MU8 473 aa17.81■□□□□ 0.44
PCDHGA11-202ENST00000518882 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.81■□□□□ 0.44
PCDHGA11-202ENST00000518882 PKD2L1Q9P0L9 805 aa17.81■□□□□ 0.44
PCDHGA11-202ENST00000518882 LOC102724159A0A0B4J2E5 919 aa17.8■□□□□ 0.44
PCDHGA11-202ENST00000518882 TP73O15350 636 aa17.8■□□□□ 0.44
PCDHGA11-202ENST00000518882 MTA2O94776 668 aa17.8■□□□□ 0.44
PCDHGA11-202ENST00000518882 GGPS1O95749 300 aa17.8■□□□□ 0.44
PCDHGA11-202ENST00000518882 MYBPC2Q14324 1141 aa17.8■□□□□ 0.44
PCDHGA11-202ENST00000518882 PWP2Q15269 919 aaKnown RBP17.8■□□□□ 0.44
PCDHGA11-202ENST00000518882 STRIP1Q5VSL9 837 aa17.8■□□□□ 0.44
PCDHGA11-202ENST00000518882 ELAC2Q9BQ52 826 aaKnown RBP17.8■□□□□ 0.44
PCDHGA11-202ENST00000518882 TMEM109Q9BVC6 243 aa17.8■□□□□ 0.44
PCDHGA11-202ENST00000518882 WNT8AQ9H1J5 351 aa17.8■□□□□ 0.44
PCDHGA11-202ENST00000518882 PARP2Q9UGN5 583 aa17.8■□□□□ 0.44
PCDHGA11-202ENST00000518882 CYP26A1O43174 497 aa17.79■□□□□ 0.44
PCDHGA11-202ENST00000518882 NPM3O75607 178 aaKnown RBP17.79■□□□□ 0.44
PCDHGA11-202ENST00000518882 RARGP13631 454 aa17.79■□□□□ 0.44
PCDHGA11-202ENST00000518882 PREPLQ4J6C6 727 aaPredicted RBP17.79■□□□□ 0.44
PCDHGA11-202ENST00000518882 CCDC25Q86WR0 208 aa17.79■□□□□ 0.44
PCDHGA11-202ENST00000518882 CSRNP1Q96S65 589 aa17.79■□□□□ 0.44
PCDHGA11-202ENST00000518882 SH2D3AQ9BRG2 576 aa17.79■□□□□ 0.44
PCDHGA11-202ENST00000518882 NUP85Q9BW27 656 aa17.79■□□□□ 0.44
PCDHGA11-202ENST00000518882 TEKT3Q9BXF9 490 aa17.79■□□□□ 0.44
PCDHGA11-202ENST00000518882 CCDC134Q9H6E4 229 aa17.79■□□□□ 0.44
PCDHGA11-202ENST00000518882 HSPBP1Q9NZL4 362 aa17.79■□□□□ 0.44
PCDHGA11-202ENST00000518882 ATRNL1Q5VV63 1379 aa17.79■□□□□ 0.44
PCDHGA11-202ENST00000518882 RASGRF2O14827 1237 aa17.79■□□□□ 0.44
PCDHGA11-202ENST00000518882 GBP1P32455 592 aa17.79■□□□□ 0.44
PCDHGA11-202ENST00000518882 FMO1Q01740 532 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms