RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 CTNNB1P35222 781 aa24.19■■□□□ 1.46
VEGFA-217ENST00000518538 BMPR1AP36894 532 aa24.19■■□□□ 1.46
VEGFA-217ENST00000518538 LONRF3Q496Y0 759 aa24.19■■□□□ 1.46
VEGFA-217ENST00000518538 NT5DC1Q5TFE4 455 aa24.19■■□□□ 1.46
VEGFA-217ENST00000518538 GLB1LQ6UWU2 654 aa24.19■■□□□ 1.46
VEGFA-217ENST00000518538 AGMOQ6ZNB7 445 aa24.19■■□□□ 1.46
VEGFA-217ENST00000518538 DNAJC19Q96DA6 116 aa24.19■■□□□ 1.46
VEGFA-217ENST00000518538 MRPL9Q9BYD2 267 aaKnown RBP24.19■■□□□ 1.46
VEGFA-217ENST00000518538 MRPL4Q9BYD3 311 aaKnown RBP24.19■■□□□ 1.46
VEGFA-217ENST00000518538 LRRC27Q9C0I9 530 aa24.19■■□□□ 1.46
VEGFA-217ENST00000518538 MAGEF1Q9HAY2 307 aa24.19■■□□□ 1.46
VEGFA-217ENST00000518538 KBTBD4Q9NVX7 518 aa24.19■■□□□ 1.46
VEGFA-217ENST00000518538 KCNH3Q9ULD8 1083 aa24.19■■□□□ 1.46
VEGFA-217ENST00000518538 USP20Q9Y2K6 914 aa24.19■■□□□ 1.46
VEGFA-217ENST00000518538 MYH11P35749 1972 aa24.19■■□□□ 1.46
VEGFA-217ENST00000518538 TRAK2O60296 914 aa24.18■■□□□ 1.46
VEGFA-217ENST00000518538 SLC34A2O95436 690 aa24.18■■□□□ 1.46
VEGFA-217ENST00000518538 RB1P06400 928 aa24.18■■□□□ 1.46
VEGFA-217ENST00000518538 ITGA4P13612 1032 aa24.18■■□□□ 1.46
VEGFA-217ENST00000518538 FOSL2P15408 326 aa24.18■■□□□ 1.46
VEGFA-217ENST00000518538 STRN3Q13033 797 aa24.18■■□□□ 1.46
VEGFA-217ENST00000518538 ADGRE1Q14246 886 aa24.18■■□□□ 1.46
VEGFA-217ENST00000518538 ATF7IP2Q5U623 682 aa24.18■■□□□ 1.46
VEGFA-217ENST00000518538 HACE1Q8IYU2 909 aa24.18■■□□□ 1.46
VEGFA-217ENST00000518538 ADPGKQ9BRR6 497 aa24.18■■□□□ 1.46
VEGFA-217ENST00000518538 PLVAPQ9BX97 442 aa24.18■■□□□ 1.46
VEGFA-217ENST00000518538 NXF3Q9H4D5 531 aaKnown RBP24.18■■□□□ 1.46
VEGFA-217ENST00000518538 RSAD1Q9HA92 442 aa24.18■■□□□ 1.46
VEGFA-217ENST00000518538 UBN1Q9NPG3 1134 aa24.18■■□□□ 1.46
VEGFA-217ENST00000518538 TYW1Q9NV66 732 aaKnown RBP24.18■■□□□ 1.46
VEGFA-217ENST00000518538 NLRC5Q86WI3 1866 aa24.17■■□□□ 1.46
VEGFA-217ENST00000518538 OFD1O75665 1012 aa24.17■■□□□ 1.46
VEGFA-217ENST00000518538 AMPD3Q01432 767 aa24.17■■□□□ 1.46
VEGFA-217ENST00000518538 LRRC55Q6ZSA7 311 aa24.17■■□□□ 1.46
VEGFA-217ENST00000518538 HAUS6Q7Z4H7 955 aa24.17■■□□□ 1.46
VEGFA-217ENST00000518538 FAM178BQ8IXR5 827 aa24.17■■□□□ 1.46
VEGFA-217ENST00000518538 GDPD5Q8WTR4 605 aa24.17■■□□□ 1.46
VEGFA-217ENST00000518538 FIZ1Q96SL8 496 aa24.17■■□□□ 1.46
VEGFA-217ENST00000518538 ACO2Q99798 780 aaKnown RBP24.17■■□□□ 1.46
VEGFA-217ENST00000518538 CWH43Q9H720 699 aa24.17■■□□□ 1.46
VEGFA-217ENST00000518538 GDPD2Q9HCC8 539 aa24.17■■□□□ 1.46
VEGFA-217ENST00000518538 TNFSF13BQ9Y275 285 aa24.17■■□□□ 1.46
VEGFA-217ENST00000518538 HES2Q9Y543 173 aa24.17■■□□□ 1.46
VEGFA-217ENST00000518538 TCHHQ07283 1943 aa24.17■■□□□ 1.46
VEGFA-217ENST00000518538 COL4A4P53420 1690 aaPredicted RBP24.17■■□□□ 1.46
VEGFA-217ENST00000518538 H3BNC9 293 aa24.16■■□□□ 1.46
VEGFA-217ENST00000518538 K7ENM7 598 aa24.16■■□□□ 1.46
VEGFA-217ENST00000518538 LPXNO60711 386 aa24.16■■□□□ 1.46
VEGFA-217ENST00000518538 PFKFB1P16118 471 aa24.16■■□□□ 1.46
VEGFA-217ENST00000518538 GAP43P17677 238 aa24.16■■□□□ 1.46
VEGFA-217ENST00000518538 ABCD1P33897 745 aa24.16■■□□□ 1.46
VEGFA-217ENST00000518538 DCAF4L1Q3SXM0 396 aa24.16■■□□□ 1.46
VEGFA-217ENST00000518538 NOMO2Q5JPE7 1267 aa24.16■■□□□ 1.46
VEGFA-217ENST00000518538 SPOUT1Q5T280 376 aaKnown RBP24.16■■□□□ 1.46
VEGFA-217ENST00000518538 EEF1DP3Q658K8 133 aa24.16■■□□□ 1.46
VEGFA-217ENST00000518538 APBB1IPQ7Z5R6 666 aaPredicted RBP24.16■■□□□ 1.46
VEGFA-217ENST00000518538 SFR1Q86XK3 245 aa24.16■■□□□ 1.46
VEGFA-217ENST00000518538 SLC17A8Q8NDX2 589 aa24.16■■□□□ 1.46
VEGFA-217ENST00000518538 C11orf84Q9BUA3 381 aaPredicted RBP24.16■■□□□ 1.46
VEGFA-217ENST00000518538 TARS2Q9BW92 718 aaKnown RBP24.16■■□□□ 1.46
VEGFA-217ENST00000518538 AAASQ9NRG9 546 aa24.16■■□□□ 1.46
VEGFA-217ENST00000518538 HCSTQ9UBK5 93 aa24.16■■□□□ 1.46
VEGFA-217ENST00000518538 SEL1LQ9UBV2 794 aa24.16■■□□□ 1.46
VEGFA-217ENST00000518538 HPSEQ9Y251 543 aa24.16■■□□□ 1.46
VEGFA-217ENST00000518538 CHD7Q9P2D1 2997 aa24.15■■□□□ 1.46
VEGFA-217ENST00000518538 A0A1B0GVL5 298 aa24.15■■□□□ 1.46
VEGFA-217ENST00000518538 A0A1W2PQ27 194 aa24.15■■□□□ 1.46
VEGFA-217ENST00000518538 A0A1W2PQ64 194 aa24.15■■□□□ 1.46
VEGFA-217ENST00000518538 A0A1W2PQD8 194 aa24.15■■□□□ 1.46
VEGFA-217ENST00000518538 FRMD3A2A2Y4 597 aa24.15■■□□□ 1.46
VEGFA-217ENST00000518538 LAG3P18627 525 aa24.15■■□□□ 1.46
VEGFA-217ENST00000518538 URGCPQ8TCY9 931 aa24.15■■□□□ 1.46
VEGFA-217ENST00000518538 STAMQ92783 540 aa24.15■■□□□ 1.46
VEGFA-217ENST00000518538 TRIM9Q9C026 710 aa24.15■■□□□ 1.46
VEGFA-217ENST00000518538 RNF39Q9H2S5 420 aa24.15■■□□□ 1.46
VEGFA-217ENST00000518538 INPP5FQ9Y2H2 1132 aa24.15■■□□□ 1.46
VEGFA-217ENST00000518538 GIT1Q9Y2X7 761 aa24.15■■□□□ 1.46
VEGFA-217ENST00000518538 KIAA1671Q9BY89 1806 aa24.14■■□□□ 1.46
VEGFA-217ENST00000518538 CDH23Q9H251 3354 aa24.14■■□□□ 1.46
VEGFA-217ENST00000518538 FAM237AA0A1B0GTK4 181 aa24.14■■□□□ 1.45
VEGFA-217ENST00000518538 INPPL1O15357 1258 aa24.14■■□□□ 1.45
VEGFA-217ENST00000518538 IDEP14735 1019 aa24.14■■□□□ 1.45
VEGFA-217ENST00000518538 POU3F3P20264 500 aaPredicted RBP24.14■■□□□ 1.45
VEGFA-217ENST00000518538 IGFBP4P22692 258 aa24.14■■□□□ 1.45
VEGFA-217ENST00000518538 GPM6BQ13491 265 aa24.14■■□□□ 1.45
VEGFA-217ENST00000518538 CNNM4Q6P4Q7 775 aa24.14■■□□□ 1.45
VEGFA-217ENST00000518538 CEP57L1Q8IYX8 460 aa24.14■■□□□ 1.45
VEGFA-217ENST00000518538 P2RX5Q93086 422 aa24.14■■□□□ 1.45
VEGFA-217ENST00000518538 APOL6Q9BWW8 343 aa24.14■■□□□ 1.45
VEGFA-217ENST00000518538 ST6GALNAC4Q9H4F1 302 aa24.14■■□□□ 1.45
VEGFA-217ENST00000518538 PTPRHQ9HD43 1115 aa24.14■■□□□ 1.45
VEGFA-217ENST00000518538 CHMP5Q9NZZ3 219 aa24.14■■□□□ 1.45
VEGFA-217ENST00000518538 TBX20Q9UMR3 447 aa24.14■■□□□ 1.45
VEGFA-217ENST00000518538 PCDHB12Q9Y5F1 795 aa24.14■■□□□ 1.45
VEGFA-217ENST00000518538 ZMYM2Q9UBW7 1377 aa24.14■■□□□ 1.45
VEGFA-217ENST00000518538 GTPBP6O43824 516 aaPredicted RBP24.13■■□□□ 1.45
VEGFA-217ENST00000518538 PROZP22891 400 aa24.13■■□□□ 1.45
VEGFA-217ENST00000518538 NMT1P30419 496 aaKnown RBP24.13■■□□□ 1.45
VEGFA-217ENST00000518538 GTF2BQ00403 316 aa24.13■■□□□ 1.45
VEGFA-217ENST00000518538 CSPP1Q1MSJ5 1256 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms