RNA–Protein interactions for RNA: ENST00000518537.5

PCM1-206, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-206ENST00000518537 KRT39Q6A163 491 aa18.01■□□□□ 0.47
PCM1-206ENST00000518537 TAPT1Q6NXT6 567 aa18.01■□□□□ 0.47
PCM1-206ENST00000518537 GPR142Q7Z601 462 aa18.01■□□□□ 0.47
PCM1-206ENST00000518537 SRGAP1Q7Z6B7 1085 aa18.01■□□□□ 0.47
PCM1-206ENST00000518537 MTERF4Q7Z6M4 381 aaKnown RBP18.01■□□□□ 0.47
PCM1-206ENST00000518537 ZNF467Q7Z7K2 595 aaPredicted RBP18.01■□□□□ 0.47
PCM1-206ENST00000518537 PTPN18Q99952 460 aa18.01■□□□□ 0.47
PCM1-206ENST00000518537 SUGCTQ9HAC7 445 aa18.01■□□□□ 0.47
PCM1-206ENST00000518537 TMEM8AQ9HCN3 771 aa18.01■□□□□ 0.47
PCM1-206ENST00000518537 TRPC6Q9Y210 931 aa18.01■□□□□ 0.47
PCM1-206ENST00000518537 KIAA0391O15091 583 aaKnown RBP18■□□□□ 0.47
PCM1-206ENST00000518537 EXTL3O43909 919 aa18■□□□□ 0.47
PCM1-206ENST00000518537 PIGRP01833 764 aa18■□□□□ 0.47
PCM1-206ENST00000518537 MATR3P43243 847 aaKnown RBP eCLIP18■□□□□ 0.474e-7■■■■□ 22.9
PCM1-206ENST00000518537 NAP1L1P55209 391 aaKnown RBP18■□□□□ 0.47
PCM1-206ENST00000518537 LAMC2Q13753 1193 aa18■□□□□ 0.47
PCM1-206ENST00000518537 SLFN12LQ6IEE8 588 aa18■□□□□ 0.47
PCM1-206ENST00000518537 TRAPPC11Q7Z392 1133 aa18■□□□□ 0.47
PCM1-206ENST00000518537 RNF10Q8N5U6 811 aaKnown RBP18■□□□□ 0.47
PCM1-206ENST00000518537 PRPF31Q8WWY3 499 aaKnown RBP18■□□□□ 0.47
PCM1-206ENST00000518537 CDKN2AIPQ9NXV6 580 aaPredicted RBP18■□□□□ 0.47
PCM1-206ENST00000518537 PUF60Q9UHX1 559 aaKnown RBP18■□□□□ 0.47
PCM1-206ENST00000518537 USP20Q9Y2K6 914 aa18■□□□□ 0.47
PCM1-206ENST00000518537 CAPN6Q9Y6Q1 641 aa18■□□□□ 0.47
PCM1-206ENST00000518537 ADCY3O60266 1144 aa18■□□□□ 0.47
PCM1-206ENST00000518537 GH1P01241 217 aa18■□□□□ 0.47
PCM1-206ENST00000518537 GTF2H1P32780 548 aa18■□□□□ 0.47
PCM1-206ENST00000518537 ENPEPQ07075 957 aa18■□□□□ 0.47
PCM1-206ENST00000518537 ARHGAP1Q07960 439 aa18■□□□□ 0.47
PCM1-206ENST00000518537 DRP2Q13474 957 aa18■□□□□ 0.47
PCM1-206ENST00000518537 HSP90AA2PQ14568 343 aaPredicted RBP18■□□□□ 0.47
PCM1-206ENST00000518537 KIAA0753Q2KHM9 967 aa18■□□□□ 0.47
PCM1-206ENST00000518537 TEX35Q5T0J7 233 aa18■□□□□ 0.47
PCM1-206ENST00000518537 PAPD7Q5XG87 772 aaKnown RBP18■□□□□ 0.47
PCM1-206ENST00000518537 ARHGEF19Q8IW93 802 aa18■□□□□ 0.47
PCM1-206ENST00000518537 PDCL2Q8N4E4 241 aa18■□□□□ 0.47
PCM1-206ENST00000518537 GOLGA1Q92805 767 aa18■□□□□ 0.47
PCM1-206ENST00000518537 NOX5Q96PH1 765 aa18■□□□□ 0.47
PCM1-206ENST00000518537 POP1Q99575 1024 aaKnown RBP18■□□□□ 0.47
PCM1-206ENST00000518537 JPH2Q9BR39 696 aaPredicted RBP18■□□□□ 0.47
PCM1-206ENST00000518537 GPR88Q9GZN0 384 aa18■□□□□ 0.47
PCM1-206ENST00000518537 HDAC6Q9UBN7 1215 aa18■□□□□ 0.47
PCM1-206ENST00000518537 AGO2Q9UKV8 859 aaKnown RBP18■□□□□ 0.47
PCM1-206ENST00000518537 SAR1BQ9Y6B6 198 aa18■□□□□ 0.47
PCM1-206ENST00000518537 STYXL1Q9Y6J8 313 aa18■□□□□ 0.47
PCM1-206ENST00000518537 HBP1O60381 514 aa17.99■□□□□ 0.47
PCM1-206ENST00000518537 HUNKP57058 714 aa17.99■□□□□ 0.47
PCM1-206ENST00000518537 BMS1Q14692 1282 aaKnown RBP17.99■□□□□ 0.47
PCM1-206ENST00000518537 NAB2Q15742 525 aa17.99■□□□□ 0.47
PCM1-206ENST00000518537 FAM110CQ1W6H9 321 aa17.99■□□□□ 0.47
PCM1-206ENST00000518537 CST9Q5W186 159 aa17.99■□□□□ 0.47
PCM1-206ENST00000518537 PLEKHH3Q7Z736 793 aa17.99■□□□□ 0.47
PCM1-206ENST00000518537 PSPC1Q8WXF1 523 aaKnown RBP17.99■□□□□ 0.47
PCM1-206ENST00000518537 MAP7D2Q96T17 732 aa17.99■□□□□ 0.47
PCM1-206ENST00000518537 NAGPAQ9UK23 515 aa17.99■□□□□ 0.47
PCM1-206ENST00000518537 JRKLQ9Y4A0 524 aa17.99■□□□□ 0.47
PCM1-206ENST00000518537 DLATP10515 647 aaKnown RBP17.98■□□□□ 0.47
PCM1-206ENST00000518537 MAPK4P31152 587 aa17.98■□□□□ 0.47
PCM1-206ENST00000518537 CHMP4BP1P59074 171 aa17.98■□□□□ 0.47
PCM1-206ENST00000518537 ALKBH5Q6P6C2 394 aaKnown RBP17.98■□□□□ 0.47
PCM1-206ENST00000518537 TARS2Q9BW92 718 aaKnown RBP17.98■□□□□ 0.47
PCM1-206ENST00000518537 NMRK2Q9NPI5 230 aa17.98■□□□□ 0.47
PCM1-206ENST00000518537 TOPORSQ9NS56 1045 aaPredicted RBP17.98■□□□□ 0.47
PCM1-206ENST00000518537 SALL4Q9UJQ4 1053 aa17.98■□□□□ 0.47
PCM1-206ENST00000518537 RBM47A0AV96 593 aaKnown RBP17.98■□□□□ 0.47
PCM1-206ENST00000518537 ZBTB42B2RXF5 422 aa17.98■□□□□ 0.47
PCM1-206ENST00000518537 BUB1O43683 1085 aa17.98■□□□□ 0.47
PCM1-206ENST00000518537 LRRN2O75325 713 aa17.98■□□□□ 0.47
PCM1-206ENST00000518537 EFNA5P52803 228 aa17.98■□□□□ 0.47
PCM1-206ENST00000518537 LAMTOR4Q0VGL1 99 aa17.98■□□□□ 0.47
PCM1-206ENST00000518537 GRB14Q14449 540 aa17.98■□□□□ 0.47
PCM1-206ENST00000518537 MXD4Q14582 209 aaPredicted RBP17.98■□□□□ 0.47
PCM1-206ENST00000518537 GJC2Q5T442 439 aaPredicted RBP17.98■□□□□ 0.47
PCM1-206ENST00000518537 RSRC2Q7L4I2 434 aaKnown RBP17.98■□□□□ 0.47
PCM1-206ENST00000518537 LRRC71Q8N4P6 559 aa17.98■□□□□ 0.47
PCM1-206ENST00000518537 ZBTB45Q96K62 511 aaPredicted RBP17.98■□□□□ 0.47
PCM1-206ENST00000518537 PACSIN1Q9BY11 444 aa17.98■□□□□ 0.47
PCM1-206ENST00000518537 ERAP1Q9NZ08 941 aa17.98■□□□□ 0.47
PCM1-206ENST00000518537 IGKV6-21A0A0C4DH24 114 aa17.97■□□□□ 0.47
PCM1-206ENST00000518537 FOXN3O00409 490 aaPredicted RBP17.97■□□□□ 0.47
PCM1-206ENST00000518537 LDHAP00338 332 aaKnown RBP17.97■□□□□ 0.47
PCM1-206ENST00000518537 MAMDC4Q6UXC1 1216 aa17.97■□□□□ 0.47
PCM1-206ENST00000518537 ZBTB8OSQ8IWT0 167 aa17.97■□□□□ 0.47
PCM1-206ENST00000518537 FBXL13Q8NEE6 735 aa17.97■□□□□ 0.47
PCM1-206ENST00000518537 U2AF1L4Q8WU68 220 aaKnown RBP17.97■□□□□ 0.47
PCM1-206ENST00000518537 TRAPPC12Q8WVT3 735 aa17.97■□□□□ 0.47
PCM1-206ENST00000518537 MSTO1Q9BUK6 570 aa17.97■□□□□ 0.47
PCM1-206ENST00000518537 ANKFY1Q9P2R3 1169 aa17.97■□□□□ 0.47
PCM1-206ENST00000518537 COQ4Q9Y3A0 265 aa17.97■□□□□ 0.47
PCM1-206ENST00000518537 DDX3XO00571 662 aaKnown RBP eCLIP17.97■□□□□ 0.475e-15■■□□□ 13.9
PCM1-206ENST00000518537 SRGAP2CP0DJJ0 459 aa17.97■□□□□ 0.47
PCM1-206ENST00000518537 KLRC1P26715 233 aa17.97■□□□□ 0.47
PCM1-206ENST00000518537 ADCYAP1R1P41586 468 aa17.97■□□□□ 0.47
PCM1-206ENST00000518537 MKRN4PQ13434 485 aaPredicted RBP17.97■□□□□ 0.47
PCM1-206ENST00000518537 PSMD6Q15008 389 aa17.97■□□□□ 0.47
PCM1-206ENST00000518537 SEMA4DQ92854 862 aa17.97■□□□□ 0.47
PCM1-206ENST00000518537 MAML3Q96JK9 1138 aa17.97■□□□□ 0.47
PCM1-206ENST00000518537 FNBP1Q96RU3 617 aa17.97■□□□□ 0.47
PCM1-206ENST00000518537 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.97■□□□□ 0.478e-8■■■■■ 29
PCM1-206ENST00000518537 SUCLA2Q9P2R7 463 aaPredicted RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms