RNA–Protein interactions for RNA: ENST00000517766.5

CD47-205, Transcript of CD47 molecule, humanhuman

TSL 2

Gene CD47, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-205ENST00000517766 KIAA0895Q8NCT3 520 aa6.47□□□□□ -1.37
CD47-205ENST00000517766 GLIS3Q8NEA6 775 aa6.47□□□□□ -1.37
CD47-205ENST00000517766 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.47□□□□□ -1.37
CD47-205ENST00000517766 CLEC4DQ8WXI8 215 aa6.47□□□□□ -1.37
CD47-205ENST00000517766 TBC1D5Q92609 795 aa6.47□□□□□ -1.37
CD47-205ENST00000517766 RNF34Q969K3 372 aa6.47□□□□□ -1.37
CD47-205ENST00000517766 DCPSQ96C86 337 aaKnown RBP6.47□□□□□ -1.37
CD47-205ENST00000517766 DNAJC19Q96DA6 116 aa6.47□□□□□ -1.37
CD47-205ENST00000517766 FRMD6Q96NE9 622 aa6.47□□□□□ -1.37
CD47-205ENST00000517766 RIT2Q99578 217 aa6.47□□□□□ -1.37
CD47-205ENST00000517766 BAG1Q99933 345 aaPredicted RBP6.47□□□□□ -1.37
CD47-205ENST00000517766 EIF2AK1Q9BQI3 630 aaKnown RBP6.47□□□□□ -1.37
CD47-205ENST00000517766 ZNF577Q9BSK1 485 aa6.47□□□□□ -1.37
CD47-205ENST00000517766 VPS16Q9H269 839 aa6.47□□□□□ -1.37
CD47-205ENST00000517766 LIN7BQ9HAP6 207 aa6.47□□□□□ -1.37
CD47-205ENST00000517766 SLC39A2Q9NP94 309 aa6.47□□□□□ -1.37
CD47-205ENST00000517766 DNAJB12Q9NXW2 375 aaKnown RBP6.47□□□□□ -1.37
CD47-205ENST00000517766 KCND2Q9NZV8 630 aa6.47□□□□□ -1.37
CD47-205ENST00000517766 SCAF8Q9UPN6 1271 aaKnown RBP6.47□□□□□ -1.37
CD47-205ENST00000517766 PAXBP1Q9Y5B6 917 aa6.47□□□□□ -1.37
CD47-205ENST00000517766 MYH9P35579 1960 aaKnown RBP6.47□□□□□ -1.37
CD47-205ENST00000517766 A0A0G2JMZ2 1700 aa6.46□□□□□ -1.38
CD47-205ENST00000517766 LGALS16A8MUM7 142 aa6.46□□□□□ -1.38
CD47-205ENST00000517766 VWA5AO00534 786 aa6.46□□□□□ -1.38
CD47-205ENST00000517766 ATP2A1O14983 1001 aa6.46□□□□□ -1.38
CD47-205ENST00000517766 FBXO24O75426 580 aa6.46□□□□□ -1.38
CD47-205ENST00000517766 MAP3K6O95382 1288 aa6.46□□□□□ -1.38
CD47-205ENST00000517766 SPATA31C1P0DKV0 1188 aa6.46□□□□□ -1.38
CD47-205ENST00000517766 TNNT1P13805 278 aa6.46□□□□□ -1.38
CD47-205ENST00000517766 CPB1P15086 417 aa6.46□□□□□ -1.38
CD47-205ENST00000517766 TAL1P17542 331 aaPredicted RBP6.46□□□□□ -1.38
CD47-205ENST00000517766 GAP43P17677 238 aa6.46□□□□□ -1.38
CD47-205ENST00000517766 MX2P20592 715 aa6.46□□□□□ -1.38
CD47-205ENST00000517766 STAT3P40763 770 aa6.46□□□□□ -1.38
CD47-205ENST00000517766 EPS15P42566 896 aa6.46□□□□□ -1.38
CD47-205ENST00000517766 CHRNA4P43681 627 aa6.46□□□□□ -1.38
CD47-205ENST00000517766 MTIF2P46199 727 aaKnown RBP6.46□□□□□ -1.38
CD47-205ENST00000517766 PMS1P54277 932 aaKnown RBP6.46□□□□□ -1.38
CD47-205ENST00000517766 FKBP3Q00688 224 aaKnown RBP6.46□□□□□ -1.38
CD47-205ENST00000517766 UBXN1Q04323 297 aa6.46□□□□□ -1.38
CD47-205ENST00000517766 COG2Q14746 738 aa6.46□□□□□ -1.38
CD47-205ENST00000517766 SPRED3Q2MJR0 410 aa6.46□□□□□ -1.38
CD47-205ENST00000517766 HERC4Q5GLZ8 1057 aaPredicted RBP6.46□□□□□ -1.38
CD47-205ENST00000517766 FKBP15Q5T1M5 1219 aa6.46□□□□□ -1.38
CD47-205ENST00000517766 KIAA0319Q5VV43 1072 aa6.46□□□□□ -1.38
CD47-205ENST00000517766 RNF207Q6ZRF8 634 aa6.46□□□□□ -1.38
CD47-205ENST00000517766 CATSPERGQ6ZRH7 1159 aa6.46□□□□□ -1.38
CD47-205ENST00000517766 IRF2BP1Q8IU81 584 aa6.46□□□□□ -1.38
CD47-205ENST00000517766 C17orf53Q8N3J3 647 aaPredicted RBP6.46□□□□□ -1.38
CD47-205ENST00000517766 MB21D1Q8N884 522 aa6.46□□□□□ -1.38
CD47-205ENST00000517766 CEP120Q8N960 986 aa6.46□□□□□ -1.38
CD47-205ENST00000517766 TC2NQ8N9U0 490 aa6.46□□□□□ -1.38
CD47-205ENST00000517766 CYP2W1Q8TAV3 490 aa6.46□□□□□ -1.38
CD47-205ENST00000517766 SYTL5Q8TDW5 730 aaPredicted RBP6.46□□□□□ -1.38
CD47-205ENST00000517766 ZKSCAN4Q969J2 545 aaPredicted RBP6.46□□□□□ -1.38
CD47-205ENST00000517766 GJA10Q969M2 543 aa6.46□□□□□ -1.38
CD47-205ENST00000517766 CRELD1Q96HD1 420 aa6.46□□□□□ -1.38
CD47-205ENST00000517766 SPACA7Q96KW9 195 aa6.46□□□□□ -1.38
CD47-205ENST00000517766 CNOT6LQ96LI5 555 aaKnown RBP6.46□□□□□ -1.38
CD47-205ENST00000517766 NACC1Q96RE7 527 aa6.46□□□□□ -1.38
CD47-205ENST00000517766 HSD17B14Q9BPX1 270 aa6.46□□□□□ -1.38
CD47-205ENST00000517766 TUBGCP2Q9BSJ2 902 aa6.46□□□□□ -1.38
CD47-205ENST00000517766 RASSF4Q9H2L5 321 aa6.46□□□□□ -1.38
CD47-205ENST00000517766 RAVER2Q9HCJ3 691 aaKnown RBP6.46□□□□□ -1.38
CD47-205ENST00000517766 JADE2Q9NQC1 790 aa6.46□□□□□ -1.38
CD47-205ENST00000517766 TBC1D22BQ9NU19 505 aa6.46□□□□□ -1.38
CD47-205ENST00000517766 HOXC10Q9NYD6 342 aa6.46□□□□□ -1.38
CD47-205ENST00000517766 TAB2Q9NYJ8 693 aa6.46□□□□□ -1.38
CD47-205ENST00000517766 RNF181Q9P0P0 153 aa6.46□□□□□ -1.38
CD47-205ENST00000517766 FAM8A1Q9UBU6 413 aa6.46□□□□□ -1.38
CD47-205ENST00000517766 TCEAL9Q9UHQ7 104 aa6.46□□□□□ -1.38
CD47-205ENST00000517766 KLF15Q9UIH9 416 aa6.46□□□□□ -1.38
CD47-205ENST00000517766 ADAMTS5Q9UNA0 930 aa6.46□□□□□ -1.38
CD47-205ENST00000517766 AFG3L2Q9Y4W6 797 aa6.46□□□□□ -1.38
CD47-205ENST00000517766 UBIAD1Q9Y5Z9 338 aa6.46□□□□□ -1.38
CD47-205ENST00000517766 ZHX2Q9Y6X8 837 aa6.46□□□□□ -1.38
CD47-205ENST00000517766 ARID2Q68CP9 1835 aa6.46□□□□□ -1.38
CD47-205ENST00000517766 SSC5DA1L4H1 1573 aa6.45□□□□□ -1.38
CD47-205ENST00000517766 LCTP09848 1927 aa6.45□□□□□ -1.38
CD47-205ENST00000517766 IPO5O00410 1097 aaKnown RBP6.45□□□□□ -1.38
CD47-205ENST00000517766 NFIBO00712 420 aa6.45□□□□□ -1.38
CD47-205ENST00000517766 MAFGO15525 162 aa6.45□□□□□ -1.38
CD47-205ENST00000517766 CALUO43852 315 aaPredicted RBP6.45□□□□□ -1.38
CD47-205ENST00000517766 DKC1O60832 514 aaKnown RBP eCLIP6.45□□□□□ -1.38
CD47-205ENST00000517766 MFAP3LO75121 409 aa6.45□□□□□ -1.38
CD47-205ENST00000517766 TBCAO75347 108 aaKnown RBP6.45□□□□□ -1.38
CD47-205ENST00000517766 USP2O75604 605 aaPredicted RBP6.45□□□□□ -1.38
CD47-205ENST00000517766 STAM2O75886 525 aa6.45□□□□□ -1.38
CD47-205ENST00000517766 DDNO94850 711 aaPredicted RBP6.45□□□□□ -1.38
CD47-205ENST00000517766 SLITRK3O94933 977 aa6.45□□□□□ -1.38
CD47-205ENST00000517766 KIF4AO95239 1232 aa6.45□□□□□ -1.38
CD47-205ENST00000517766 ARP10275 920 aa6.45□□□□□ -1.38
CD47-205ENST00000517766 NF2P35240 595 aa6.45□□□□□ -1.38
CD47-205ENST00000517766 IREB2P48200 963 aaKnown RBP6.45□□□□□ -1.38
CD47-205ENST00000517766 HMGCS2P54868 508 aa6.45□□□□□ -1.38
CD47-205ENST00000517766 ADKP55263 362 aaKnown RBP6.45□□□□□ -1.38
CD47-205ENST00000517766 RPS6P62753 249 aaKnown RBP6.45□□□□□ -1.38
CD47-205ENST00000517766 RBL2Q08999 1139 aa6.45□□□□□ -1.38
CD47-205ENST00000517766 PABPC4Q13310 644 aaKnown RBP eCLIP6.45□□□□□ -1.38
CD47-205ENST00000517766 GIT2Q14161 759 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms