RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 PRG3Q9Y2Y8 225 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC9-203ENST00000517667 PCDHGA2Q9Y5H1 932 aa12.84□□□□□ -0.35
TRAPPC9-203ENST00000517667 COL4A3BPQ9Y5P4 624 aa12.84□□□□□ -0.35
TRAPPC9-203ENST00000517667 NUMBLQ9Y6R0 609 aa12.84□□□□□ -0.35
TRAPPC9-203ENST00000517667 TPRP12270 2363 aaKnown RBP12.83□□□□□ -0.36
TRAPPC9-203ENST00000517667 TMEM150BA6NC51 233 aa12.83□□□□□ -0.36
TRAPPC9-203ENST00000517667 LAMTOR5O43504 91 aa12.83□□□□□ -0.36
TRAPPC9-203ENST00000517667 PSMD10O75832 226 aa12.83□□□□□ -0.36
TRAPPC9-203ENST00000517667 EFEMP2O95967 443 aa12.83□□□□□ -0.36
TRAPPC9-203ENST00000517667 NCLP19338 710 aaKnown RBP12.83□□□□□ -0.36
TRAPPC9-203ENST00000517667 MAGEA9P43362 315 aa12.83□□□□□ -0.36
TRAPPC9-203ENST00000517667 OR1G1P47890 313 aa12.83□□□□□ -0.36
TRAPPC9-203ENST00000517667 FGD1P98174 961 aa12.83□□□□□ -0.36
TRAPPC9-203ENST00000517667 AKAP17AQ02040 695 aaKnown RBP12.83□□□□□ -0.36
TRAPPC9-203ENST00000517667 PCBP1Q15365 356 aaKnown RBP eCLIP12.83□□□□□ -0.36
TRAPPC9-203ENST00000517667 VARS2Q5ST30 1063 aaKnown RBP12.83□□□□□ -0.36
TRAPPC9-203ENST00000517667 SRGAP1Q7Z6B7 1085 aa12.83□□□□□ -0.36
TRAPPC9-203ENST00000517667 KSR1Q8IVT5 923 aa12.83□□□□□ -0.36
TRAPPC9-203ENST00000517667 COLGALT2Q8IYK4 626 aa12.83□□□□□ -0.36
TRAPPC9-203ENST00000517667 TCEANC2Q96MN5 208 aa12.83□□□□□ -0.36
TRAPPC9-203ENST00000517667 C22orf23Q9BZE7 217 aa12.83□□□□□ -0.36
TRAPPC9-203ENST00000517667 PRKD2Q9BZL6 878 aa12.83□□□□□ -0.36
TRAPPC9-203ENST00000517667 FOXQ1Q9C009 403 aa12.83□□□□□ -0.36
TRAPPC9-203ENST00000517667 NAP1L2Q9ULW6 460 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC9-203ENST00000517667 PPME1Q9Y570 386 aa12.83□□□□□ -0.36
TRAPPC9-203ENST00000517667 ZFHX4Q86UP3 3567 aa12.83□□□□□ -0.36
TRAPPC9-203ENST00000517667 NID2Q14112 1375 aa12.82□□□□□ -0.36
TRAPPC9-203ENST00000517667 KANSL1LA0AUZ9 987 aa12.82□□□□□ -0.36
TRAPPC9-203ENST00000517667 POTEMA6NI47 508 aa12.82□□□□□ -0.36
TRAPPC9-203ENST00000517667 DDX11L8A8MPP1 907 aa12.82□□□□□ -0.36
TRAPPC9-203ENST00000517667 PRR5-ARHGAP8B1AHC4 643 aa12.82□□□□□ -0.36
TRAPPC9-203ENST00000517667 ADAMTS3O15072 1205 aa12.82□□□□□ -0.36
TRAPPC9-203ENST00000517667 PRPF3O43395 683 aaKnown RBP12.82□□□□□ -0.36
TRAPPC9-203ENST00000517667 TGM5O43548 720 aa12.82□□□□□ -0.36
TRAPPC9-203ENST00000517667 GAS2O43903 313 aaKnown RBP12.82□□□□□ -0.36
TRAPPC9-203ENST00000517667 DKC1O60832 514 aaKnown RBP eCLIP12.82□□□□□ -0.364e-8■■■■■ 77
TRAPPC9-203ENST00000517667 STBD1O95210 358 aa12.82□□□□□ -0.36
TRAPPC9-203ENST00000517667 HMGB1P09429 215 aaKnown RBP12.82□□□□□ -0.36
TRAPPC9-203ENST00000517667 ITGA4P13612 1032 aa12.82□□□□□ -0.36
TRAPPC9-203ENST00000517667 GLULP15104 373 aa12.82□□□□□ -0.36
TRAPPC9-203ENST00000517667 ADD1P35611 737 aaKnown RBP12.82□□□□□ -0.36
TRAPPC9-203ENST00000517667 AFF1P51825 1210 aaKnown RBP12.82□□□□□ -0.36
TRAPPC9-203ENST00000517667 PSMC5P62195 406 aa12.82□□□□□ -0.36
TRAPPC9-203ENST00000517667 ARHGAP8P85298 464 aa12.82□□□□□ -0.36
TRAPPC9-203ENST00000517667 LMNB2Q03252 620 aa12.82□□□□□ -0.36
TRAPPC9-203ENST00000517667 PRKCQQ04759 706 aa12.82□□□□□ -0.36
TRAPPC9-203ENST00000517667 DSC1Q08554 894 aa12.82□□□□□ -0.36
TRAPPC9-203ENST00000517667 KRT32Q14532 448 aa12.82□□□□□ -0.36
TRAPPC9-203ENST00000517667 Q4G0T1 1027 aa12.82□□□□□ -0.36
TRAPPC9-203ENST00000517667 POTEGQ6S5H5 508 aa12.82□□□□□ -0.36
TRAPPC9-203ENST00000517667 ANO5Q75V66 913 aa12.82□□□□□ -0.36
TRAPPC9-203ENST00000517667 MTSS1LQ765P7 747 aa12.82□□□□□ -0.36
TRAPPC9-203ENST00000517667 MAML2Q8IZL2 1156 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC9-203ENST00000517667 ATRIPQ8WXE1 791 aa12.82□□□□□ -0.36
TRAPPC9-203ENST00000517667 SH2D3AQ9BRG2 576 aa12.82□□□□□ -0.36
TRAPPC9-203ENST00000517667 OSBPL6Q9BZF3 934 aa12.82□□□□□ -0.36
TRAPPC9-203ENST00000517667 CHST7Q9NS84 486 aa12.82□□□□□ -0.36
TRAPPC9-203ENST00000517667 SPATA6Q9NWH7 488 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC9-203ENST00000517667 FNIP2Q9P278 1114 aa12.82□□□□□ -0.36
TRAPPC9-203ENST00000517667 ARID2Q68CP9 1835 aa12.81□□□□□ -0.36
TRAPPC9-203ENST00000517667 ARL5CA6NH57 179 aa12.81□□□□□ -0.36
TRAPPC9-203ENST00000517667 KRT37O76014 449 aa12.81□□□□□ -0.36
TRAPPC9-203ENST00000517667 ERLIN2O94905 339 aa12.81□□□□□ -0.36
TRAPPC9-203ENST00000517667 SPATA31D3P0C874 917 aa12.81□□□□□ -0.36
TRAPPC9-203ENST00000517667 FSHRP23945 695 aa12.81□□□□□ -0.36
TRAPPC9-203ENST00000517667 HOXA11P31270 313 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC9-203ENST00000517667 PFKPQ01813 784 aa12.81□□□□□ -0.36
TRAPPC9-203ENST00000517667 USP41Q3LFD5 358 aa12.81□□□□□ -0.36
TRAPPC9-203ENST00000517667 TSGA10IPQ3SY00 556 aa12.81□□□□□ -0.36
TRAPPC9-203ENST00000517667 UBXN11Q5T124 520 aa12.81□□□□□ -0.36
TRAPPC9-203ENST00000517667 B3GNT9Q6UX72 402 aa12.81□□□□□ -0.36
TRAPPC9-203ENST00000517667 RSPO2Q6UXX9 243 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC9-203ENST00000517667 SPATA31D4Q6ZUB0 917 aa12.81□□□□□ -0.36
TRAPPC9-203ENST00000517667 TAS1R1Q7RTX1 841 aa12.81□□□□□ -0.36
TRAPPC9-203ENST00000517667 PALB2Q86YC2 1186 aa12.81□□□□□ -0.36
TRAPPC9-203ENST00000517667 PSPC1Q8WXF1 523 aaKnown RBP12.81□□□□□ -0.36
TRAPPC9-203ENST00000517667 CCDC51Q96ER9 411 aa12.81□□□□□ -0.36
TRAPPC9-203ENST00000517667 DDX23Q9BUQ8 820 aaKnown RBP12.81□□□□□ -0.36
TRAPPC9-203ENST00000517667 COLEC11Q9BWP8 271 aa12.81□□□□□ -0.36
TRAPPC9-203ENST00000517667 RNF26Q9BY78 433 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC9-203ENST00000517667 CDV3Q9UKY7 258 aaKnown RBP12.81□□□□□ -0.36
TRAPPC9-203ENST00000517667 IPPQ9Y573 584 aa12.81□□□□□ -0.36
TRAPPC9-203ENST00000517667 CYP3A7-CYP3A51PA0A087WV96 503 aa12.8□□□□□ -0.36
TRAPPC9-203ENST00000517667 ASAP2O43150 1006 aa12.8□□□□□ -0.36
TRAPPC9-203ENST00000517667 ZMYND10O75800 440 aa12.8□□□□□ -0.36
TRAPPC9-203ENST00000517667 MYBP10242 640 aa12.8□□□□□ -0.36
TRAPPC9-203ENST00000517667 CYP3A7P24462 503 aa12.8□□□□□ -0.36
TRAPPC9-203ENST00000517667 AXLP30530 894 aa12.8□□□□□ -0.36
TRAPPC9-203ENST00000517667 MLH1P40692 756 aa12.8□□□□□ -0.36
TRAPPC9-203ENST00000517667 RFC5P40937 340 aa12.8□□□□□ -0.36
TRAPPC9-203ENST00000517667 GPC5P78333 572 aa12.8□□□□□ -0.36
TRAPPC9-203ENST00000517667 NCBP1Q09161 790 aaKnown RBP12.8□□□□□ -0.36
TRAPPC9-203ENST00000517667 SNW1Q13573 536 aaKnown RBP12.8□□□□□ -0.36
TRAPPC9-203ENST00000517667 MLF2Q15773 248 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC9-203ENST00000517667 NOTUMQ6P988 496 aa12.8□□□□□ -0.36
TRAPPC9-203ENST00000517667 LILRA6Q6PI73 481 aa12.8□□□□□ -0.36
TRAPPC9-203ENST00000517667 HACE1Q8IYU2 909 aa12.8□□□□□ -0.36
TRAPPC9-203ENST00000517667 SMG8Q8ND04 991 aaKnown RBP12.8□□□□□ -0.36
TRAPPC9-203ENST00000517667 TBCKQ8TEA7 893 aa12.8□□□□□ -0.36
TRAPPC9-203ENST00000517667 TCP11Q8WWU5 503 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms