RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 STXBP4Q6ZWJ1 553 aa-0.34□□□□□ -2.46
SNORA40.16-201ENST00000517238 PEG10Q86TG7 708 aaKnown RBP-0.34□□□□□ -2.46
SNORA40.16-201ENST00000517238 RBM23Q86U06 439 aaKnown RBP-0.34□□□□□ -2.46
SNORA40.16-201ENST00000517238 FBXL14Q8N1E6 418 aa-0.34□□□□□ -2.46
SNORA40.16-201ENST00000517238 LILRB2Q8N423 598 aa-0.34□□□□□ -2.46
SNORA40.16-201ENST00000517238 SSH3Q8TE77 659 aa-0.34□□□□□ -2.46
SNORA40.16-201ENST00000517238 REPS1Q96D71 796 aa-0.34□□□□□ -2.46
SNORA40.16-201ENST00000517238 ATOH8Q96SQ7 321 aa-0.34□□□□□ -2.46
SNORA40.16-201ENST00000517238 CPPED1Q9BRF8 314 aaPredicted RBP-0.34□□□□□ -2.46
SNORA40.16-201ENST00000517238 ARHGAP39Q9C0H5 1083 aa-0.34□□□□□ -2.46
SNORA40.16-201ENST00000517238 SLC6A15Q9H2J7 730 aa-0.34□□□□□ -2.46
SNORA40.16-201ENST00000517238 C6orf106Q9H6K1 298 aaPredicted RBP-0.34□□□□□ -2.46
SNORA40.16-201ENST00000517238 SPON1Q9HCB6 807 aa-0.34□□□□□ -2.46
SNORA40.16-201ENST00000517238 PDGFCQ9NRA1 345 aa-0.34□□□□□ -2.46
SNORA40.16-201ENST00000517238 RALYQ9UKM9 306 aaKnown RBP-0.34□□□□□ -2.46
SNORA40.16-201ENST00000517238 FPGT-TNNI3KV9GXZ4 949 aa-0.34□□□□□ -2.46
SNORA40.16-201ENST00000517238 A0A0U1RQF3 1178 aa-0.35□□□□□ -2.47
SNORA40.16-201ENST00000517238 SPRR5A0A1B0GTR4 108 aa-0.35□□□□□ -2.47
SNORA40.16-201ENST00000517238 MEIOCA2RUB1 952 aa-0.35□□□□□ -2.47
SNORA40.16-201ENST00000517238 MARCH11A6NNE9 402 aa-0.35□□□□□ -2.47
SNORA40.16-201ENST00000517238 DIRC3C9JPN6 131 aa-0.35□□□□□ -2.47
SNORA40.16-201ENST00000517238 LEFTY2O00292 366 aa-0.35□□□□□ -2.47
SNORA40.16-201ENST00000517238 PEX1O43933 1283 aa-0.35□□□□□ -2.47
SNORA40.16-201ENST00000517238 EGFP01133 1207 aa-0.35□□□□□ -2.47
SNORA40.16-201ENST00000517238 ALOX5P09917 674 aa-0.35□□□□□ -2.47
SNORA40.16-201ENST00000517238 ZBTB48P10074 688 aaPredicted RBP-0.35□□□□□ -2.47
SNORA40.16-201ENST00000517238 RAG1P15918 1043 aa-0.35□□□□□ -2.47
SNORA40.16-201ENST00000517238 ZSCAN20P17040 1043 aaPredicted RBP-0.35□□□□□ -2.47
SNORA40.16-201ENST00000517238 MAPK10P53779 464 aa-0.35□□□□□ -2.47
SNORA40.16-201ENST00000517238 XGP55808 180 aa-0.35□□□□□ -2.47
SNORA40.16-201ENST00000517238 BPIFB4P59827 614 aa-0.35□□□□□ -2.47
SNORA40.16-201ENST00000517238 NFATC2Q13469 925 aa-0.35□□□□□ -2.47
SNORA40.16-201ENST00000517238 PROSER3Q2NL68 480 aa-0.35□□□□□ -2.47
SNORA40.16-201ENST00000517238 PDCD4Q53EL6 469 aaKnown RBP-0.35□□□□□ -2.47
SNORA40.16-201ENST00000517238 NOL9Q5SY16 702 aaKnown RBP-0.35□□□□□ -2.47
SNORA40.16-201ENST00000517238 GPR157Q5UAW9 335 aa-0.35□□□□□ -2.47
SNORA40.16-201ENST00000517238 PRAMEF17Q5VTA0 474 aa-0.35□□□□□ -2.47
SNORA40.16-201ENST00000517238 DSTYKQ6XUX3 929 aa-0.35□□□□□ -2.47
SNORA40.16-201ENST00000517238 ARHGAP30Q7Z6I6 1101 aaPredicted RBP-0.35□□□□□ -2.47
SNORA40.16-201ENST00000517238 RASAL3Q86YV0 1011 aa-0.35□□□□□ -2.47
SNORA40.16-201ENST00000517238 ANKRD52Q8NB46 1076 aa-0.35□□□□□ -2.47
SNORA40.16-201ENST00000517238 FAM200AQ8TCP9 573 aa-0.35□□□□□ -2.47
SNORA40.16-201ENST00000517238 DPF3Q92784 378 aa-0.35□□□□□ -2.47
SNORA40.16-201ENST00000517238 NTPCRQ9BSD7 190 aaKnown RBP-0.35□□□□□ -2.47
SNORA40.16-201ENST00000517238 SRCIN1Q9C0H9 1055 aa-0.35□□□□□ -2.47
SNORA40.16-201ENST00000517238 COL20A1Q9P218 1284 aa-0.35□□□□□ -2.47
SNORA40.16-201ENST00000517238 REV1Q9UBZ9 1251 aa-0.35□□□□□ -2.47
SNORA40.16-201ENST00000517238 SERGEFQ9UGK8 458 aa-0.35□□□□□ -2.47
SNORA40.16-201ENST00000517238 POU2F3Q9UKI9 436 aa-0.35□□□□□ -2.47
SNORA40.16-201ENST00000517238 CELA1Q9UNI1 258 aa-0.35□□□□□ -2.47
SNORA40.16-201ENST00000517238 COA3Q9Y2R0 106 aaPredicted RBP-0.35□□□□□ -2.47
SNORA40.16-201ENST00000517238 A0A0G2JNJ9 132 aa-0.36□□□□□ -2.47
SNORA40.16-201ENST00000517238 A0A1B0GUV1 79 aa-0.36□□□□□ -2.47
SNORA40.16-201ENST00000517238 TARM1B6A8C7 271 aa-0.36□□□□□ -2.47
SNORA40.16-201ENST00000517238 TISP43B9A030 160 aa-0.36□□□□□ -2.47
SNORA40.16-201ENST00000517238 IFNL4K9M1U5 179 aa-0.36□□□□□ -2.47
SNORA40.16-201ENST00000517238 MYO1FO00160 1098 aa-0.36□□□□□ -2.47
SNORA40.16-201ENST00000517238 STXBP3O00186 592 aa-0.36□□□□□ -2.47
SNORA40.16-201ENST00000517238 TULP3O75386 442 aa-0.36□□□□□ -2.47
SNORA40.16-201ENST00000517238 SSFA2P28290 1259 aa-0.36□□□□□ -2.47
SNORA40.16-201ENST00000517238 GRIA3P42263 894 aa-0.36□□□□□ -2.47
SNORA40.16-201ENST00000517238 PXNP49023 591 aaPredicted RBP-0.36□□□□□ -2.47
SNORA40.16-201ENST00000517238 DLX5P56178 289 aa-0.36□□□□□ -2.47
SNORA40.16-201ENST00000517238 RPL6Q02878 288 aaKnown RBP-0.36□□□□□ -2.47
SNORA40.16-201ENST00000517238 ILF3Q12906 894 aaKnown RBP eCLIP-0.36□□□□□ -2.47
SNORA40.16-201ENST00000517238 ORC1Q13415 861 aa-0.36□□□□□ -2.47
SNORA40.16-201ENST00000517238 SPDYE7PQ495Y7 208 aa-0.36□□□□□ -2.47
SNORA40.16-201ENST00000517238 HABP4Q5JVS0 413 aaKnown RBP-0.36□□□□□ -2.47
SNORA40.16-201ENST00000517238 C10orf25Q5T742 122 aa-0.36□□□□□ -2.47
SNORA40.16-201ENST00000517238 KAZNQ674X7 775 aa-0.36□□□□□ -2.47
SNORA40.16-201ENST00000517238 ZNF497Q6ZNH5 498 aa-0.36□□□□□ -2.47
SNORA40.16-201ENST00000517238 TMC7Q7Z402 723 aa-0.36□□□□□ -2.47
SNORA40.16-201ENST00000517238 ZNF547Q8IVP9 402 aa-0.36□□□□□ -2.47
SNORA40.16-201ENST00000517238 IQCF1Q8N6M8 205 aa-0.36□□□□□ -2.47
SNORA40.16-201ENST00000517238 ZNF548Q8NEK5 533 aaPredicted RBP-0.36□□□□□ -2.47
SNORA40.16-201ENST00000517238 PHOSPHO1Q8TCT1 267 aa-0.36□□□□□ -2.47
SNORA40.16-201ENST00000517238 HELQQ8TDG4 1101 aa-0.36□□□□□ -2.47
SNORA40.16-201ENST00000517238 EPS8L3Q8TE67 593 aaKnown RBP-0.36□□□□□ -2.47
SNORA40.16-201ENST00000517238 ZC3H15Q8WU90 426 aaKnown RBP-0.36□□□□□ -2.47
SNORA40.16-201ENST00000517238 ASB5Q8WWX0 329 aa-0.36□□□□□ -2.47
SNORA40.16-201ENST00000517238 BRF1Q92994 677 aa-0.36□□□□□ -2.47
SNORA40.16-201ENST00000517238 LPPQ93052 612 aa-0.36□□□□□ -2.47
SNORA40.16-201ENST00000517238 SLC7A6OSQ96CW6 309 aaPredicted RBP-0.36□□□□□ -2.47
SNORA40.16-201ENST00000517238 TRMT2BQ96GJ1 504 aaKnown RBP-0.36□□□□□ -2.47
SNORA40.16-201ENST00000517238 SNX27Q96L92 541 aa-0.36□□□□□ -2.47
SNORA40.16-201ENST00000517238 ZDHHC15Q96MV8 337 aa-0.36□□□□□ -2.47
SNORA40.16-201ENST00000517238 HAPLN3Q96S86 360 aa-0.36□□□□□ -2.47
SNORA40.16-201ENST00000517238 BCO2Q9BYV7 579 aa-0.36□□□□□ -2.47
SNORA40.16-201ENST00000517238 KCTD5Q9NXV2 234 aa-0.36□□□□□ -2.47
SNORA40.16-201ENST00000517238 Q9UFV3 132 aa-0.36□□□□□ -2.47
SNORA40.16-201ENST00000517238 WDR3Q9UNX4 943 aaKnown RBP eCLIP-0.36□□□□□ -2.47
SNORA40.16-201ENST00000517238 GAB2Q9UQC2 676 aa-0.36□□□□□ -2.47
SNORA40.16-201ENST00000517238 SF3B6Q9Y3B4 125 aaKnown RBP-0.36□□□□□ -2.47
SNORA40.16-201ENST00000517238 CTDP1Q9Y5B0 961 aaPredicted RBP-0.36□□□□□ -2.47
SNORA40.16-201ENST00000517238 ZHX2Q9Y6X8 837 aa-0.36□□□□□ -2.47
SNORA40.16-201ENST00000517238 EVPLQ92817 2033 aa-0.37□□□□□ -2.47
SNORA40.16-201ENST00000517238 DENND3A2RUS2 1198 aa-0.37□□□□□ -2.47
SNORA40.16-201ENST00000517238 SMTNL1A8MU46 457 aa-0.37□□□□□ -2.47
SNORA40.16-201ENST00000517238 PRRT4C9JH25 899 aa-0.37□□□□□ -2.47
SNORA40.16-201ENST00000517238 SMIM22K7EJ46 135 aa-0.37□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms