RNA–Protein interactions for RNA: ENST00000516222.1

RNU6-561P-201, Transcript of RNA, U6 small nuclear 561, pseudogene, humanhuman

BASIC

Gene RNU6-561P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-561P-201ENST00000516222 ATP11BQ9Y2G3 1177 aa2.46□□□□□ -2.02
RNU6-561P-201ENST00000516222 MRPS23Q9Y3D9 190 aaKnown RBP2.46□□□□□ -2.02
RNU6-561P-201ENST00000516222 NOX1Q9Y5S8 564 aa2.46□□□□□ -2.02
RNU6-561P-201ENST00000516222 MAST3O60307 1309 aa2.45□□□□□ -2.02
RNU6-561P-201ENST00000516222 A0A0A6YYJ9 748 aa2.45□□□□□ -2.02
RNU6-561P-201ENST00000516222 LOC101059915A0A1B0GWI6 518 aaPredicted RBP2.45□□□□□ -2.02
RNU6-561P-201ENST00000516222 B5MCH6 92 aa2.45□□□□□ -2.02
RNU6-561P-201ENST00000516222 ADCY3O60266 1144 aa2.45□□□□□ -2.02
RNU6-561P-201ENST00000516222 NRP2O60462 931 aa2.45□□□□□ -2.02
RNU6-561P-201ENST00000516222 RBMXL2O75526 392 aaKnown RBP2.45□□□□□ -2.02
RNU6-561P-201ENST00000516222 CDKL5O76039 1030 aa2.45□□□□□ -2.02
RNU6-561P-201ENST00000516222 BMP15O95972 392 aa2.45□□□□□ -2.02
RNU6-561P-201ENST00000516222 ZBTB48P10074 688 aaPredicted RBP2.45□□□□□ -2.02
RNU6-561P-201ENST00000516222 EGR2P11161 476 aaPredicted RBP2.45□□□□□ -2.02
RNU6-561P-201ENST00000516222 ZFP36P26651 326 aaKnown RBP2.45□□□□□ -2.02
RNU6-561P-201ENST00000516222 MPLP40238 635 aa2.45□□□□□ -2.02
RNU6-561P-201ENST00000516222 RARRES1P49788 294 aa2.45□□□□□ -2.02
RNU6-561P-201ENST00000516222 TP53BP2Q13625 1128 aa2.45□□□□□ -2.02
RNU6-561P-201ENST00000516222 RASGRF1Q13972 1273 aa2.45□□□□□ -2.02
RNU6-561P-201ENST00000516222 ZNF169Q14929 603 aaPredicted RBP2.45□□□□□ -2.02
RNU6-561P-201ENST00000516222 EPHA7Q15375 998 aa2.45□□□□□ -2.02
RNU6-561P-201ENST00000516222 AKNAD1Q5T1N1 836 aa2.45□□□□□ -2.02
RNU6-561P-201ENST00000516222 SPATC1Q76KD6 591 aa2.45□□□□□ -2.02
RNU6-561P-201ENST00000516222 OTOP1Q7RTM1 612 aa2.45□□□□□ -2.02
RNU6-561P-201ENST00000516222 PTF1AQ7RTS3 328 aa2.45□□□□□ -2.02
RNU6-561P-201ENST00000516222 ZZZ3Q8IYH5 903 aa2.45□□□□□ -2.02
RNU6-561P-201ENST00000516222 Q8N9P0 234 aaPredicted RBP2.45□□□□□ -2.02
RNU6-561P-201ENST00000516222 ZFP28Q8NHY6 868 aa2.45□□□□□ -2.02
RNU6-561P-201ENST00000516222 CDC5LQ99459 802 aaKnown RBP2.45□□□□□ -2.02
RNU6-561P-201ENST00000516222 C1QTNF7Q9BXJ2 289 aa2.45□□□□□ -2.02
RNU6-561P-201ENST00000516222 KRTAP1-5Q9BYS1 174 aa2.45□□□□□ -2.02
RNU6-561P-201ENST00000516222 CPEB1Q9BZB8 566 aaKnown RBP2.45□□□□□ -2.02
RNU6-561P-201ENST00000516222 MTG2Q9H4K7 406 aa2.45□□□□□ -2.02
RNU6-561P-201ENST00000516222 PRDM13Q9H4Q3 707 aa2.45□□□□□ -2.02
RNU6-561P-201ENST00000516222 SLC52A2Q9HAB3 445 aa2.45□□□□□ -2.02
RNU6-561P-201ENST00000516222 ST20-MTHFSA0A0A6YYL1 179 aa2.44□□□□□ -2.02
RNU6-561P-201ENST00000516222 LEFTY2O00292 366 aa2.44□□□□□ -2.02
RNU6-561P-201ENST00000516222 OPHN1O60890 802 aa2.44□□□□□ -2.02
RNU6-561P-201ENST00000516222 PRPF6O94906 941 aaKnown RBP2.44□□□□□ -2.02
RNU6-561P-201ENST00000516222 GAAP10253 952 aa2.44□□□□□ -2.02
RNU6-561P-201ENST00000516222 ZSCAN20P17040 1043 aaPredicted RBP2.44□□□□□ -2.02
RNU6-561P-201ENST00000516222 NRG3P56975 720 aa2.44□□□□□ -2.02
RNU6-561P-201ENST00000516222 KRTAP10-7P60409 375 aaPredicted RBP2.44□□□□□ -2.02
RNU6-561P-201ENST00000516222 MRPS35P82673 323 aaKnown RBP2.44□□□□□ -2.02
RNU6-561P-201ENST00000516222 APBA1Q02410 837 aa2.44□□□□□ -2.02
RNU6-561P-201ENST00000516222 SRSF7Q16629 238 aaKnown RBP eCLIP2.44□□□□□ -2.02
RNU6-561P-201ENST00000516222 KIAA1841Q6NSI8 718 aa2.44□□□□□ -2.02
RNU6-561P-201ENST00000516222 LMBR1LQ6UX01 489 aa2.44□□□□□ -2.02
RNU6-561P-201ENST00000516222 PDZD4Q76G19 769 aaPredicted RBP2.44□□□□□ -2.02
RNU6-561P-201ENST00000516222 LRP10Q7Z4F1 713 aa2.44□□□□□ -2.02
RNU6-561P-201ENST00000516222 XYLT1Q86Y38 959 aa2.44□□□□□ -2.02
RNU6-561P-201ENST00000516222 SYT12Q8IV01 421 aa2.44□□□□□ -2.02
RNU6-561P-201ENST00000516222 OR10H5Q8NGA6 315 aa2.44□□□□□ -2.02
RNU6-561P-201ENST00000516222 HIRIP3Q9BW71 556 aaPredicted RBP2.44□□□□□ -2.02
RNU6-561P-201ENST00000516222 LSM14BQ9BX40 385 aaKnown RBP2.44□□□□□ -2.02
RNU6-561P-201ENST00000516222 PITHD1Q9GZP4 211 aaPredicted RBP2.44□□□□□ -2.02
RNU6-561P-201ENST00000516222 ENKD1Q9H0I2 346 aa2.44□□□□□ -2.02
RNU6-561P-201ENST00000516222 CCDC113Q9H0I3 377 aa2.44□□□□□ -2.02
RNU6-561P-201ENST00000516222 CASS4Q9NQ75 786 aa2.44□□□□□ -2.02
RNU6-561P-201ENST00000516222 DKK2Q9UBU2 259 aa2.44□□□□□ -2.02
RNU6-561P-201ENST00000516222 CHST2Q9Y4C5 530 aa2.44□□□□□ -2.02
RNU6-561P-201ENST00000516222 USP15Q9Y4E8 981 aaPredicted RBP2.44□□□□□ -2.02
RNU6-561P-201ENST00000516222 KDM2BQ8NHM5 1336 aa2.43□□□□□ -2.02
RNU6-561P-201ENST00000516222 CCDC85CA6NKD9 419 aa2.43□□□□□ -2.02
RNU6-561P-201ENST00000516222 TBKBP1A7MCY6 615 aa2.43□□□□□ -2.02
RNU6-561P-201ENST00000516222 STK10O94804 968 aaKnown RBP2.43□□□□□ -2.02
RNU6-561P-201ENST00000516222 SPDEFO95238 335 aa2.43□□□□□ -2.02
RNU6-561P-201ENST00000516222 MATN4O95460 622 aa2.43□□□□□ -2.02
RNU6-561P-201ENST00000516222 POU3F3P20264 500 aaPredicted RBP2.43□□□□□ -2.02
RNU6-561P-201ENST00000516222 FLT3P36888 993 aa2.43□□□□□ -2.02
RNU6-561P-201ENST00000516222 RBM25P49756 843 aaKnown RBP2.43□□□□□ -2.02
RNU6-561P-201ENST00000516222 SIM1P81133 766 aaPredicted RBP2.43□□□□□ -2.02
RNU6-561P-201ENST00000516222 EZH2Q15910 746 aaKnown RBP2.43□□□□□ -2.02
RNU6-561P-201ENST00000516222 PDCD4Q53EL6 469 aaKnown RBP2.43□□□□□ -2.02
RNU6-561P-201ENST00000516222 FSTL4Q6MZW2 842 aa2.43□□□□□ -2.02
RNU6-561P-201ENST00000516222 Q6ZNX1 250 aa2.43□□□□□ -2.02
RNU6-561P-201ENST00000516222 TAS1R1Q7RTX1 841 aa2.43□□□□□ -2.02
RNU6-561P-201ENST00000516222 FAM43AQ8N2R8 423 aa2.43□□□□□ -2.02
RNU6-561P-201ENST00000516222 KIAA1958Q8N8K9 716 aa2.43□□□□□ -2.02
RNU6-561P-201ENST00000516222 CDYL2Q8N8U2 506 aa2.43□□□□□ -2.02
RNU6-561P-201ENST00000516222 GSTCDQ8NEC7 633 aa2.43□□□□□ -2.02
RNU6-561P-201ENST00000516222 ASB10Q8WXI3 467 aa2.43□□□□□ -2.02
RNU6-561P-201ENST00000516222 TFAP2CQ92754 450 aa2.43□□□□□ -2.02
RNU6-561P-201ENST00000516222 FERMT2Q96AC1 680 aa2.43□□□□□ -2.02
RNU6-561P-201ENST00000516222 EXOC2Q96KP1 924 aa2.43□□□□□ -2.02
RNU6-561P-201ENST00000516222 Q96MF0 132 aa2.43□□□□□ -2.02
RNU6-561P-201ENST00000516222 INTS7Q9NVH2 962 aaKnown RBP2.43□□□□□ -2.02
RNU6-561P-201ENST00000516222 PCDHB6Q9Y5E3 794 aa2.43□□□□□ -2.02
RNU6-561P-201ENST00000516222 SETD1BQ9UPS6 1966 aaKnown RBP2.42□□□□□ -2.02
RNU6-561P-201ENST00000516222 COL3A1P02461 1466 aaPredicted RBP2.42□□□□□ -2.02
RNU6-561P-201ENST00000516222 TCRBV16S1A1N1A0A5B0 115 aa2.42□□□□□ -2.02
RNU6-561P-201ENST00000516222 PTPDC1A2A3K4 754 aa2.42□□□□□ -2.02
RNU6-561P-201ENST00000516222 WDR91A4D1P6 747 aa2.42□□□□□ -2.02
RNU6-561P-201ENST00000516222 M0R2C6 588 aa2.42□□□□□ -2.02
RNU6-561P-201ENST00000516222 FAM153BP0C7A2 387 aa2.42□□□□□ -2.02
RNU6-561P-201ENST00000516222 PTGER1P34995 402 aa2.42□□□□□ -2.02
RNU6-561P-201ENST00000516222 CD69Q07108 199 aa2.42□□□□□ -2.02
RNU6-561P-201ENST00000516222 CCDC178Q5BJE1 867 aa2.42□□□□□ -2.02
RNU6-561P-201ENST00000516222 TRIM61Q5EBN2 209 aa2.42□□□□□ -2.02
RNU6-561P-201ENST00000516222 LCE1AQ5T7P2 110 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms