RNA–Protein interactions for RNA: ENST00000515682.5

SH3TC1-225, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene SH3TC1, Length 4,293 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-225ENST00000515682 MED1Q15648 1581 aaPredicted RBP14.55□□□□□ -0.08
SH3TC1-225ENST00000515682 AKAP3O75969 853 aa14.55□□□□□ -0.08
SH3TC1-225ENST00000515682 GSTA1P08263 222 aa14.55□□□□□ -0.08
SH3TC1-225ENST00000515682 NT5DC3Q86UY8 548 aa14.55□□□□□ -0.08
SH3TC1-225ENST00000515682 BTBD6Q96KE9 485 aa14.55□□□□□ -0.08
SH3TC1-225ENST00000515682 NUP85Q9BW27 656 aa14.55□□□□□ -0.08
SH3TC1-225ENST00000515682 ALG13Q9NP73 1137 aaKnown RBP14.55□□□□□ -0.08
SH3TC1-225ENST00000515682 LRRC4BQ9NT99 713 aa14.55□□□□□ -0.08
SH3TC1-225ENST00000515682 ANAPC7Q9UJX3 599 aa14.55□□□□□ -0.08
SH3TC1-225ENST00000515682 AFDNP55196 1824 aaKnown RBP14.54□□□□□ -0.08
SH3TC1-225ENST00000515682 DDX3XO00571 662 aaKnown RBP eCLIP14.54□□□□□ -0.086e-7■■■□□ 17.6
SH3TC1-225ENST00000515682 OPHN1O60890 802 aa14.54□□□□□ -0.08
SH3TC1-225ENST00000515682 BMP3P12645 472 aa14.54□□□□□ -0.08
SH3TC1-225ENST00000515682 SKIP12755 728 aa14.54□□□□□ -0.08
SH3TC1-225ENST00000515682 XRCC4Q13426 336 aa14.54□□□□□ -0.08
SH3TC1-225ENST00000515682 EDRF1Q3B7T1 1238 aa14.54□□□□□ -0.08
SH3TC1-225ENST00000515682 ZNF564Q8TBZ8 553 aaPredicted RBP14.54□□□□□ -0.08
SH3TC1-225ENST00000515682 PAGR1Q9BTK6 254 aa14.54□□□□□ -0.08
SH3TC1-225ENST00000515682 FGFBP2Q9BYJ0 223 aa14.54□□□□□ -0.08
SH3TC1-225ENST00000515682 PNMA3Q9UL41 463 aa14.54□□□□□ -0.08
SH3TC1-225ENST00000515682 ZBTB12Q9Y330 459 aaPredicted RBP14.54□□□□□ -0.08
SH3TC1-225ENST00000515682 C4orf33Q8N1A6 199 aa14.54□□□□□ -0.08
SH3TC1-225ENST00000515682 SCFD2Q8WU76 684 aa14.54□□□□□ -0.08
SH3TC1-225ENST00000515682 MAIP1Q8WWC4 291 aa14.54□□□□□ -0.08
SH3TC1-225ENST00000515682 CCT6BQ92526 530 aa14.54□□□□□ -0.08
SH3TC1-225ENST00000515682 SLC12A6Q9UHW9 1150 aa14.54□□□□□ -0.08
SH3TC1-225ENST00000515682 HAO1Q9UJM8 370 aa14.54□□□□□ -0.08
SH3TC1-225ENST00000515682 AGTPBP1Q9UPW5 1226 aa14.54□□□□□ -0.08
SH3TC1-225ENST00000515682 MYO3BQ8WXR4 1341 aa14.54□□□□□ -0.08
SH3TC1-225ENST00000515682 A8MUI8 341 aa14.54□□□□□ -0.08
SH3TC1-225ENST00000515682 DPEP1P16444 411 aa14.54□□□□□ -0.08
SH3TC1-225ENST00000515682 SLC8A3P57103 927 aa14.54□□□□□ -0.08
SH3TC1-225ENST00000515682 PTENP60484 403 aa14.54□□□□□ -0.08
SH3TC1-225ENST00000515682 SPARCL1Q14515 664 aa14.54□□□□□ -0.08
SH3TC1-225ENST00000515682 HAUS1Q96CS2 278 aa14.54□□□□□ -0.08
SH3TC1-225ENST00000515682 RILPQ96NA2 401 aa14.54□□□□□ -0.08
SH3TC1-225ENST00000515682 DLGAP2Q9P1A6 1054 aa14.54□□□□□ -0.08
SH3TC1-225ENST00000515682 FLT1P17948 1338 aa14.54□□□□□ -0.08
SH3TC1-225ENST00000515682 NALCNQ8IZF0 1738 aa14.53□□□□□ -0.08
SH3TC1-225ENST00000515682 ASAP2O43150 1006 aa14.53□□□□□ -0.08
SH3TC1-225ENST00000515682 HARSP12081 509 aaKnown RBP14.53□□□□□ -0.08
SH3TC1-225ENST00000515682 RPL21P46778 160 aaKnown RBP14.53□□□□□ -0.08
SH3TC1-225ENST00000515682 SPRED3Q2MJR0 410 aa14.53□□□□□ -0.08
SH3TC1-225ENST00000515682 SUPT20HL1Q3ZLR7 823 aa14.53□□□□□ -0.08
SH3TC1-225ENST00000515682 STRIP1Q5VSL9 837 aa14.53□□□□□ -0.08
SH3TC1-225ENST00000515682 TMEM154Q6P9G4 183 aa14.53□□□□□ -0.08
SH3TC1-225ENST00000515682 APBB1IPQ7Z5R6 666 aaPredicted RBP14.53□□□□□ -0.08
SH3TC1-225ENST00000515682 CTAGE3PQ8IX95 158 aa14.53□□□□□ -0.08
SH3TC1-225ENST00000515682 ZFP69BQ9UJL9 534 aa14.53□□□□□ -0.08
SH3TC1-225ENST00000515682 TUBGCP6Q96RT7 1819 aa14.53□□□□□ -0.08
SH3TC1-225ENST00000515682 hCG_1984214I3L0E3 225 aa14.53□□□□□ -0.08
SH3TC1-225ENST00000515682 TMEM253P0C7T8 217 aa14.53□□□□□ -0.08
SH3TC1-225ENST00000515682 MXI1P50539 228 aa14.53□□□□□ -0.08
SH3TC1-225ENST00000515682 ARHGAP4P98171 946 aa14.53□□□□□ -0.08
SH3TC1-225ENST00000515682 CFAP157Q5JU67 520 aa14.53□□□□□ -0.08
SH3TC1-225ENST00000515682 ZNF713Q8N859 430 aaPredicted RBP14.53□□□□□ -0.08
SH3TC1-225ENST00000515682 SLC16A10Q8TF71 515 aa14.53□□□□□ -0.08
SH3TC1-225ENST00000515682 TCHPQ9BT92 498 aa14.53□□□□□ -0.08
SH3TC1-225ENST00000515682 POLLQ9UGP5 575 aa14.53□□□□□ -0.08
SH3TC1-225ENST00000515682 MRPL11Q9Y3B7 192 aaKnown RBP14.53□□□□□ -0.08
SH3TC1-225ENST00000515682 CFAP69A5D8W1 941 aa14.53□□□□□ -0.08
SH3TC1-225ENST00000515682 PDXKO00764 312 aa14.53□□□□□ -0.08
SH3TC1-225ENST00000515682 AKR1B1P15121 316 aa14.53□□□□□ -0.08
SH3TC1-225ENST00000515682 MTM1Q13496 603 aa14.53□□□□□ -0.08
SH3TC1-225ENST00000515682 PHLDB3Q6NSJ2 640 aa14.53□□□□□ -0.08
SH3TC1-225ENST00000515682 USP37Q86T82 979 aa14.53□□□□□ -0.08
SH3TC1-225ENST00000515682 ATG4AQ8WYN0 398 aa14.53□□□□□ -0.08
SH3TC1-225ENST00000515682 AGPAT1Q99943 283 aa14.53□□□□□ -0.08
SH3TC1-225ENST00000515682 SPON1Q9HCB6 807 aa14.53□□□□□ -0.08
SH3TC1-225ENST00000515682 ARHGAP42A6NI28 874 aa14.52□□□□□ -0.08
SH3TC1-225ENST00000515682 GOLGA8SH3BPF8 625 aa14.52□□□□□ -0.08
SH3TC1-225ENST00000515682 GOLGA8MH3BSY2 632 aa14.52□□□□□ -0.08
SH3TC1-225ENST00000515682 DCTN3O75935 186 aa14.52□□□□□ -0.08
SH3TC1-225ENST00000515682 NOL4O94818 638 aa14.52□□□□□ -0.08
SH3TC1-225ENST00000515682 PLS3P13797 630 aa14.52□□□□□ -0.08
SH3TC1-225ENST00000515682 ANKRD20A2Q5SQ80 823 aa14.52□□□□□ -0.08
SH3TC1-225ENST00000515682 ANKRD20A1Q5TYW2 823 aa14.52□□□□□ -0.08
SH3TC1-225ENST00000515682 ARHGAP24Q8N264 748 aa14.52□□□□□ -0.08
SH3TC1-225ENST00000515682 SLC30A5Q8TAD4 765 aa14.52□□□□□ -0.08
SH3TC1-225ENST00000515682 LRRC15Q8TF66 581 aa14.52□□□□□ -0.08
SH3TC1-225ENST00000515682 CNKSR2Q8WXI2 1034 aa14.52□□□□□ -0.08
SH3TC1-225ENST00000515682 NAF1Q96HR8 494 aaKnown RBP14.52□□□□□ -0.08
SH3TC1-225ENST00000515682 TMEM237Q96Q45 408 aa14.52□□□□□ -0.08
SH3TC1-225ENST00000515682 NR2E1Q9Y466 385 aa14.52□□□□□ -0.08
SH3TC1-225ENST00000515682 IVNS1ABPQ9Y6Y0 642 aa14.52□□□□□ -0.08
SH3TC1-225ENST00000515682 ZBTB5O15062 677 aa14.52□□□□□ -0.08
SH3TC1-225ENST00000515682 GYG2O15488 501 aa14.52□□□□□ -0.08
SH3TC1-225ENST00000515682 FMO5P49326 533 aa14.52□□□□□ -0.08
SH3TC1-225ENST00000515682 TMEM179Q6ZVK1 233 aa14.52□□□□□ -0.08
SH3TC1-225ENST00000515682 STK33Q9BYT3 514 aa14.52□□□□□ -0.08
SH3TC1-225ENST00000515682 CDC42EP4Q9H3Q1 356 aaKnown RBP14.52□□□□□ -0.08
SH3TC1-225ENST00000515682 CTNNAL1Q9UBT7 734 aa14.52□□□□□ -0.08
SH3TC1-225ENST00000515682 CCPG1Q9ULG6 757 aa14.52□□□□□ -0.08
SH3TC1-225ENST00000515682 SUGT1Q9Y2Z0 365 aa14.52□□□□□ -0.08
SH3TC1-225ENST00000515682 LTN1O94822 1766 aa14.52□□□□□ -0.08
SH3TC1-225ENST00000515682 POLR2MP0CAP2 368 aa14.52□□□□□ -0.09
SH3TC1-225ENST00000515682 GAP43P17677 238 aa14.52□□□□□ -0.09
SH3TC1-225ENST00000515682 CDR2Q01850 454 aa14.52□□□□□ -0.09
SH3TC1-225ENST00000515682 KLC1Q07866 573 aa14.52□□□□□ -0.09
SH3TC1-225ENST00000515682 ORC2Q13416 577 aaPredicted RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms