RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 ENPEPQ07075 957 aa16.76■□□□□ 0.27
THUMPD3-210ENST00000515662 CAPSQ13938 189 aa16.76■□□□□ 0.27
THUMPD3-210ENST00000515662 WHAMMP3Q1A5X7 153 aa16.76■□□□□ 0.27
THUMPD3-210ENST00000515662 SRGAP1Q7Z6B7 1085 aa16.76■□□□□ 0.27
THUMPD3-210ENST00000515662 TRIM58Q8NG06 486 aa16.76■□□□□ 0.27
THUMPD3-210ENST00000515662 PARK7Q99497 189 aaKnown RBP16.76■□□□□ 0.27
THUMPD3-210ENST00000515662 FAM213AQ9BRX8 229 aa16.76■□□□□ 0.27
THUMPD3-210ENST00000515662 HDAC6Q9UBN7 1215 aa16.76■□□□□ 0.27
THUMPD3-210ENST00000515662 IVNS1ABPQ9Y6Y0 642 aa16.76■□□□□ 0.27
THUMPD3-210ENST00000515662 PLXNA1Q9UIW2 1896 aa16.76■□□□□ 0.27
THUMPD3-210ENST00000515662 ANO9A1A5B4 782 aa16.75■□□□□ 0.27
THUMPD3-210ENST00000515662 LRRN2O75325 713 aa16.75■□□□□ 0.27
THUMPD3-210ENST00000515662 SLC26A2P50443 739 aa16.75■□□□□ 0.27
THUMPD3-210ENST00000515662 C10orf76Q5T2E6 689 aa16.75■□□□□ 0.27
THUMPD3-210ENST00000515662 CST9Q5W186 159 aa16.75■□□□□ 0.27
THUMPD3-210ENST00000515662 RSRC2Q7L4I2 434 aaKnown RBP16.75■□□□□ 0.27
THUMPD3-210ENST00000515662 ZNF467Q7Z7K2 595 aaPredicted RBP16.75■□□□□ 0.27
THUMPD3-210ENST00000515662 RNF10Q8N5U6 811 aaKnown RBP16.75■□□□□ 0.27
THUMPD3-210ENST00000515662 CEP112Q8N8E3 955 aa16.75■□□□□ 0.27
THUMPD3-210ENST00000515662 POP1Q99575 1024 aaKnown RBP16.75■□□□□ 0.27
THUMPD3-210ENST00000515662 SMARCAD1Q9H4L7 1026 aa16.75■□□□□ 0.27
THUMPD3-210ENST00000515662 TMEM134Q9H6X4 195 aa16.75■□□□□ 0.27
THUMPD3-210ENST00000515662 VTA1Q9NP79 307 aa16.75■□□□□ 0.27
THUMPD3-210ENST00000515662 NENFQ9UMX5 172 aa16.75■□□□□ 0.27
THUMPD3-210ENST00000515662 EXTL3O43909 919 aa16.75■□□□□ 0.27
THUMPD3-210ENST00000515662 ADCY3O60266 1144 aa16.75■□□□□ 0.27
THUMPD3-210ENST00000515662 TFRCP02786 760 aaKnown RBP16.75■□□□□ 0.27
THUMPD3-210ENST00000515662 MAP2K1Q02750 393 aaPredicted RBP16.75■□□□□ 0.27
THUMPD3-210ENST00000515662 ARHGAP1Q07960 439 aa16.75■□□□□ 0.27
THUMPD3-210ENST00000515662 DMTNQ08495 405 aa16.75■□□□□ 0.27
THUMPD3-210ENST00000515662 NAB2Q15742 525 aa16.75■□□□□ 0.27
THUMPD3-210ENST00000515662 IER5Q5VY09 327 aa16.75■□□□□ 0.27
THUMPD3-210ENST00000515662 FMNL3Q8IVF7 1028 aa16.75■□□□□ 0.27
THUMPD3-210ENST00000515662 ARHGEF19Q8IW93 802 aa16.75■□□□□ 0.27
THUMPD3-210ENST00000515662 PRPF31Q8WWY3 499 aaKnown RBP16.75■□□□□ 0.27
THUMPD3-210ENST00000515662 KIAA1586Q9HCI6 787 aa16.75■□□□□ 0.27
THUMPD3-210ENST00000515662 TMEM8AQ9HCN3 771 aa16.75■□□□□ 0.27
THUMPD3-210ENST00000515662 UBE2TQ9NPD8 197 aaPredicted RBP16.75■□□□□ 0.27
THUMPD3-210ENST00000515662 NAGPAQ9UK23 515 aa16.75■□□□□ 0.27
THUMPD3-210ENST00000515662 IGKV6-21A0A0C4DH24 114 aa16.74■□□□□ 0.27
THUMPD3-210ENST00000515662 RBM47A0AV96 593 aaKnown RBP16.74■□□□□ 0.27
THUMPD3-210ENST00000515662 GAS2O43903 313 aaKnown RBP16.74■□□□□ 0.27
THUMPD3-210ENST00000515662 GTF2H1P32780 548 aa16.74■□□□□ 0.27
THUMPD3-210ENST00000515662 MKRN4PQ13434 485 aaPredicted RBP16.74■□□□□ 0.27
THUMPD3-210ENST00000515662 ARHGAP44Q17R89 818 aa16.74■□□□□ 0.27
THUMPD3-210ENST00000515662 KIAA0753Q2KHM9 967 aa16.74■□□□□ 0.27
THUMPD3-210ENST00000515662 KRT39Q6A163 491 aa16.74■□□□□ 0.27
THUMPD3-210ENST00000515662 GPR142Q7Z601 462 aa16.74■□□□□ 0.27
THUMPD3-210ENST00000515662 USP37Q86T82 979 aa16.74■□□□□ 0.27
THUMPD3-210ENST00000515662 VPS36Q86VN1 386 aa16.74■□□□□ 0.27
THUMPD3-210ENST00000515662 PACSIN1Q9BY11 444 aa16.74■□□□□ 0.27
THUMPD3-210ENST00000515662 TOPORSQ9NS56 1045 aaPredicted RBP16.74■□□□□ 0.27
THUMPD3-210ENST00000515662 PUF60Q9UHX1 559 aaKnown RBP16.74■□□□□ 0.27
THUMPD3-210ENST00000515662 COQ4Q9Y3A0 265 aa16.74■□□□□ 0.27
THUMPD3-210ENST00000515662 SAR1BQ9Y6B6 198 aa16.74■□□□□ 0.27
THUMPD3-210ENST00000515662 ZNF233A6NK53 670 aa16.74■□□□□ 0.27
THUMPD3-210ENST00000515662 KIAA0391O15091 583 aaKnown RBP16.74■□□□□ 0.27
THUMPD3-210ENST00000515662 LAMC2Q13753 1193 aa16.74■□□□□ 0.27
THUMPD3-210ENST00000515662 MAMDC4Q6UXC1 1216 aa16.74■□□□□ 0.27
THUMPD3-210ENST00000515662 EXOC8Q8IYI6 725 aa16.74■□□□□ 0.27
THUMPD3-210ENST00000515662 OLIG1Q8TAK6 271 aa16.74■□□□□ 0.27
THUMPD3-210ENST00000515662 TCP11Q8WWU5 503 aa16.74■□□□□ 0.27
THUMPD3-210ENST00000515662 SEMA4DQ92854 862 aa16.74■□□□□ 0.27
THUMPD3-210ENST00000515662 NOX5Q96PH1 765 aa16.74■□□□□ 0.27
THUMPD3-210ENST00000515662 ALS2CR12Q96Q35 445 aa16.74■□□□□ 0.27
THUMPD3-210ENST00000515662 KATNBL1Q9H079 304 aa16.74■□□□□ 0.27
THUMPD3-210ENST00000515662 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.74■□□□□ 0.27
THUMPD3-210ENST00000515662 JRKLQ9Y4A0 524 aa16.74■□□□□ 0.27
THUMPD3-210ENST00000515662 FOXN3O00409 490 aaPredicted RBP16.73■□□□□ 0.27
THUMPD3-210ENST00000515662 DDX3XO00571 662 aaKnown RBP eCLIP16.73■□□□□ 0.279e-14■■■■□ 25.7
THUMPD3-210ENST00000515662 EDN1P05305 212 aa16.73■□□□□ 0.27
THUMPD3-210ENST00000515662 CHMP4BP1P59074 171 aa16.73■□□□□ 0.27
THUMPD3-210ENST00000515662 GRB14Q14449 540 aa16.73■□□□□ 0.27
THUMPD3-210ENST00000515662 BMS1Q14692 1282 aaKnown RBP16.73■□□□□ 0.27
THUMPD3-210ENST00000515662 SLFN12LQ6IEE8 588 aa16.73■□□□□ 0.27
THUMPD3-210ENST00000515662 ALKBH5Q6P6C2 394 aaKnown RBP16.73■□□□□ 0.27
THUMPD3-210ENST00000515662 PSPC1Q8WXF1 523 aaKnown RBP16.73■□□□□ 0.27
THUMPD3-210ENST00000515662 GOLGA1Q92805 767 aa16.73■□□□□ 0.27
THUMPD3-210ENST00000515662 VTI1AQ96AJ9 217 aa16.73■□□□□ 0.27
THUMPD3-210ENST00000515662 SYT11Q9BT88 431 aa16.73■□□□□ 0.27
THUMPD3-210ENST00000515662 TARS2Q9BW92 718 aaKnown RBP16.73■□□□□ 0.27
THUMPD3-210ENST00000515662 HAPLN2Q9GZV7 340 aa16.73■□□□□ 0.27
THUMPD3-210ENST00000515662 SUGCTQ9HAC7 445 aa16.73■□□□□ 0.27
THUMPD3-210ENST00000515662 AGO2Q9UKV8 859 aaKnown RBP16.73■□□□□ 0.27
THUMPD3-210ENST00000515662 TULP1O00294 542 aaPredicted RBP16.73■□□□□ 0.27
THUMPD3-210ENST00000515662 CCDC172P0C7W6 258 aa16.73■□□□□ 0.27
THUMPD3-210ENST00000515662 KLRC1P26715 233 aa16.73■□□□□ 0.27
THUMPD3-210ENST00000515662 LAMTOR4Q0VGL1 99 aa16.73■□□□□ 0.27
THUMPD3-210ENST00000515662 KIF22Q14807 665 aa16.73■□□□□ 0.27
THUMPD3-210ENST00000515662 FAM110CQ1W6H9 321 aa16.73■□□□□ 0.27
THUMPD3-210ENST00000515662 GJC2Q5T442 439 aaPredicted RBP16.73■□□□□ 0.27
THUMPD3-210ENST00000515662 FBXO38Q6PIJ6 1188 aa16.73■□□□□ 0.27
THUMPD3-210ENST00000515662 SLC30A5Q8TAD4 765 aa16.73■□□□□ 0.27
THUMPD3-210ENST00000515662 ZBTB45Q96K62 511 aaPredicted RBP16.73■□□□□ 0.27
THUMPD3-210ENST00000515662 TRPC6Q9Y210 931 aa16.73■□□□□ 0.27
THUMPD3-210ENST00000515662 BTNL10A8MVZ5 291 aa16.72■□□□□ 0.27
THUMPD3-210ENST00000515662 BUB1O43683 1085 aa16.72■□□□□ 0.27
THUMPD3-210ENST00000515662 HBP1O60381 514 aa16.72■□□□□ 0.27
THUMPD3-210ENST00000515662 SNAI1O95863 264 aaPredicted RBP16.72■□□□□ 0.27
THUMPD3-210ENST00000515662 GH1P01241 217 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms