RNA–Protein interactions for RNA: ENST00000515594.5

PHF3-212, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 3,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-212ENST00000515594 MMP13P45452 471 aa13.9□□□□□ -0.18
PHF3-212ENST00000515594 ELF3P78545 371 aaPredicted RBP13.9□□□□□ -0.18
PHF3-212ENST00000515594 MAP2K1Q02750 393 aaPredicted RBP13.9□□□□□ -0.18
PHF3-212ENST00000515594 ABCB5Q2M3G0 1257 aa13.9□□□□□ -0.18
PHF3-212ENST00000515594 HOOK3Q86VS8 718 aa13.9□□□□□ -0.18
PHF3-212ENST00000515594 ZSWIM1Q9BR11 485 aa13.9□□□□□ -0.18
PHF3-212ENST00000515594 LXNQ9BS40 222 aa13.9□□□□□ -0.18
PHF3-212ENST00000515594 FBXO28Q9NVF7 368 aa13.9□□□□□ -0.18
PHF3-212ENST00000515594 PFASO15067 1338 aa13.9□□□□□ -0.18
PHF3-212ENST00000515594 O00370 1275 aa13.89□□□□□ -0.19
PHF3-212ENST00000515594 RIPK2O43353 540 aa13.89□□□□□ -0.19
PHF3-212ENST00000515594 SPOPO43791 374 aa13.89□□□□□ -0.19
PHF3-212ENST00000515594 BMP3P12645 472 aa13.89□□□□□ -0.19
PHF3-212ENST00000515594 NPEPPSP55786 919 aa13.89□□□□□ -0.19
PHF3-212ENST00000515594 AUHQ13825 339 aaKnown RBP13.89□□□□□ -0.19
PHF3-212ENST00000515594 CDAN1Q8IWY9 1227 aa13.89□□□□□ -0.19
PHF3-212ENST00000515594 NAP1L4Q99733 375 aaKnown RBP13.89□□□□□ -0.19
PHF3-212ENST00000515594 COA1Q9GZY4 146 aa13.89□□□□□ -0.19
PHF3-212ENST00000515594 PNMA3Q9UL41 463 aa13.89□□□□□ -0.19
PHF3-212ENST00000515594 INTUQ9ULD6 942 aa13.89□□□□□ -0.19
PHF3-212ENST00000515594 ODF2LQ9ULJ1 636 aa13.89□□□□□ -0.19
PHF3-212ENST00000515594 TRPC6Q9Y210 931 aa13.89□□□□□ -0.19
PHF3-212ENST00000515594 PCDHA3Q9Y5H8 950 aa13.89□□□□□ -0.19
PHF3-212ENST00000515594 GTPBP10A4D1E9 387 aaKnown RBP13.89□□□□□ -0.19
PHF3-212ENST00000515594 PSMD10O75832 226 aa13.89□□□□□ -0.19
PHF3-212ENST00000515594 UBOX5O94941 541 aa13.89□□□□□ -0.19
PHF3-212ENST00000515594 EXOC3L1Q86VI1 746 aa13.89□□□□□ -0.19
PHF3-212ENST00000515594 DCAF4Q8WV16 495 aa13.89□□□□□ -0.19
PHF3-212ENST00000515594 SAAL1Q96ER3 474 aa13.89□□□□□ -0.19
PHF3-212ENST00000515594 STAMBPL1Q96FJ0 436 aa13.89□□□□□ -0.19
PHF3-212ENST00000515594 ACTR5Q9H9F9 607 aaPredicted RBP13.89□□□□□ -0.19
PHF3-212ENST00000515594 USP20Q9Y2K6 914 aa13.89□□□□□ -0.19
PHF3-212ENST00000515594 GREB1LQ9C091 1923 aaPredicted RBP13.89□□□□□ -0.19
PHF3-212ENST00000515594 PPIP5K2O43314 1243 aa13.89□□□□□ -0.19
PHF3-212ENST00000515594 CLSTN1O94985 981 aa13.89□□□□□ -0.19
PHF3-212ENST00000515594 CCDC172P0C7W6 258 aa13.89□□□□□ -0.19
PHF3-212ENST00000515594 CHRNB2P17787 502 aa13.89□□□□□ -0.19
PHF3-212ENST00000515594 GIMAP7Q8NHV1 300 aa13.89□□□□□ -0.19
PHF3-212ENST00000515594 POLR3CQ9BUI4 534 aaPredicted RBP13.89□□□□□ -0.19
PHF3-212ENST00000515594 AHDC1Q5TGY3 1603 aaPredicted RBP13.89□□□□□ -0.19
PHF3-212ENST00000515594 ZNFX1Q9P2E3 1918 aaKnown RBP13.88□□□□□ -0.19
PHF3-212ENST00000515594 TCP11X1B4DZS4 312 aa13.88□□□□□ -0.19
PHF3-212ENST00000515594 RASGRF2O14827 1237 aa13.88□□□□□ -0.19
PHF3-212ENST00000515594 NUDT17P0C025 328 aa13.88□□□□□ -0.19
PHF3-212ENST00000515594 PEX5P50542 639 aa13.88□□□□□ -0.19
PHF3-212ENST00000515594 MPP2Q14168 576 aa13.88□□□□□ -0.19
PHF3-212ENST00000515594 PREPLQ4J6C6 727 aaPredicted RBP13.88□□□□□ -0.19
PHF3-212ENST00000515594 HP1BP3Q5SSJ5 553 aaPredicted RBP13.88□□□□□ -0.19
PHF3-212ENST00000515594 C1orf220Q5T0J3 134 aa13.88□□□□□ -0.19
PHF3-212ENST00000515594 FAM182AQ5T1J6 154 aa13.88□□□□□ -0.19
PHF3-212ENST00000515594 DYDC1Q8WWB3 177 aa13.88□□□□□ -0.19
PHF3-212ENST00000515594 NUP85Q9BW27 656 aa13.88□□□□□ -0.19
PHF3-212ENST00000515594 CDC42EP4Q9H3Q1 356 aaKnown RBP13.88□□□□□ -0.19
PHF3-212ENST00000515594 KCNK9Q9NPC2 374 aa13.88□□□□□ -0.19
PHF3-212ENST00000515594 CHST7Q9NS84 486 aa13.88□□□□□ -0.19
PHF3-212ENST00000515594 TTC7AQ9ULT0 858 aaPredicted RBP13.88□□□□□ -0.19
PHF3-212ENST00000515594 POLRMTO00411 1230 aaKnown RBP13.88□□□□□ -0.19
PHF3-212ENST00000515594 TBX3O15119 743 aa13.88□□□□□ -0.19
PHF3-212ENST00000515594 TP73O15350 636 aa13.88□□□□□ -0.19
PHF3-212ENST00000515594 SOX10P56693 466 aa13.88□□□□□ -0.19
PHF3-212ENST00000515594 GRIPAP1Q4V328 841 aa13.88□□□□□ -0.19
PHF3-212ENST00000515594 SEMA4DQ92854 862 aa13.88□□□□□ -0.19
PHF3-212ENST00000515594 KREMEN1Q96MU8 473 aa13.88□□□□□ -0.19
PHF3-212ENST00000515594 ZNF577Q9BSK1 485 aa13.88□□□□□ -0.19
PHF3-212ENST00000515594 PI4K2AQ9BTU6 479 aa13.88□□□□□ -0.19
PHF3-212ENST00000515594 HEMGNQ9BXL5 484 aa13.88□□□□□ -0.19
PHF3-212ENST00000515594 DMAC2Q9NW81 257 aa13.88□□□□□ -0.19
PHF3-212ENST00000515594 NYAP2Q9P242 653 aa13.88□□□□□ -0.19
PHF3-212ENST00000515594 PI4KBQ9UBF8 816 aa13.88□□□□□ -0.19
PHF3-212ENST00000515594 MCM8Q9UJA3 840 aa13.88□□□□□ -0.19
PHF3-212ENST00000515594 SKAP2O75563 359 aaPredicted RBP13.87□□□□□ -0.19
PHF3-212ENST00000515594 ATP6V1G2O95670 118 aa13.87□□□□□ -0.19
PHF3-212ENST00000515594 PDE6BP35913 854 aa13.87□□□□□ -0.19
PHF3-212ENST00000515594 GJC1P36383 396 aa13.87□□□□□ -0.19
PHF3-212ENST00000515594 PLCB4Q15147 1175 aa13.87□□□□□ -0.19
PHF3-212ENST00000515594 MOXD1Q6UVY6 613 aa13.87□□□□□ -0.19
PHF3-212ENST00000515594 EPS8L1Q8TE68 723 aa13.87□□□□□ -0.19
PHF3-212ENST00000515594 CCDC17Q96LX7 622 aa13.87□□□□□ -0.19
PHF3-212ENST00000515594 NOD2Q9HC29 1040 aa13.87□□□□□ -0.19
PHF3-212ENST00000515594 AAASQ9NRG9 546 aa13.87□□□□□ -0.19
PHF3-212ENST00000515594 GGA2Q9UJY4 613 aa13.87□□□□□ -0.19
PHF3-212ENST00000515594 ARHGEF35A5YM69 484 aa13.87□□□□□ -0.19
PHF3-212ENST00000515594 CCDC169A6NNP5 214 aa13.87□□□□□ -0.19
PHF3-212ENST00000515594 ADRB2P07550 413 aa13.87□□□□□ -0.19
PHF3-212ENST00000515594 GAP43P17677 238 aa13.87□□□□□ -0.19
PHF3-212ENST00000515594 CIITAP33076 1130 aa13.87□□□□□ -0.19
PHF3-212ENST00000515594 EIF3BP55884 814 aaKnown RBP13.87□□□□□ -0.19
PHF3-212ENST00000515594 XRCC4Q13426 336 aa13.87□□□□□ -0.19
PHF3-212ENST00000515594 KIF22Q14807 665 aa13.87□□□□□ -0.19
PHF3-212ENST00000515594 SIX1Q15475 284 aaPredicted RBP13.87□□□□□ -0.19
PHF3-212ENST00000515594 CNGA2Q16280 664 aa13.87□□□□□ -0.19
PHF3-212ENST00000515594 KYNUQ16719 465 aa13.87□□□□□ -0.19
PHF3-212ENST00000515594 CYP4X1Q8N118 509 aa13.87□□□□□ -0.19
PHF3-212ENST00000515594 IL31RAQ8NI17 732 aa13.87□□□□□ -0.19
PHF3-212ENST00000515594 ZNF622Q969S3 477 aaKnown RBP eCLIP13.87□□□□□ -0.199e-7■□□□□ 10.2
PHF3-212ENST00000515594 STK38LQ9Y2H1 464 aa13.87□□□□□ -0.19
PHF3-212ENST00000515594 SCN9AQ15858 1988 aa13.87□□□□□ -0.19
PHF3-212ENST00000515594 TMEM120BA0PK00 339 aa13.87□□□□□ -0.19
PHF3-212ENST00000515594 EIF3DO15371 548 aaKnown RBP eCLIP13.87□□□□□ -0.19
PHF3-212ENST00000515594 CETPP11597 493 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms