RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 ZNF579Q8NAF0 562 aaKnown RBP17.6■□□□□ 0.41
LMNA-223ENST00000515459 SMG8Q8ND04 991 aaKnown RBP17.6■□□□□ 0.41
LMNA-223ENST00000515459 NXPE3Q969Y0 559 aa17.6■□□□□ 0.41
LMNA-223ENST00000515459 SEMA4AQ9H3S1 761 aa17.6■□□□□ 0.41
LMNA-223ENST00000515459 ARID2Q68CP9 1835 aa17.59■□□□□ 0.41
LMNA-223ENST00000515459 KRBA1A5PL33 1030 aa17.59■□□□□ 0.41
LMNA-223ENST00000515459 ASAP2O43150 1006 aa17.59■□□□□ 0.41
LMNA-223ENST00000515459 SLC37A4O43826 429 aa17.59■□□□□ 0.41
LMNA-223ENST00000515459 ERLIN2O94905 339 aa17.59■□□□□ 0.41
LMNA-223ENST00000515459 P4HBP07237 508 aaKnown RBP17.59■□□□□ 0.41
LMNA-223ENST00000515459 SRFP11831 508 aa17.59■□□□□ 0.41
LMNA-223ENST00000515459 INF2Q27J81 1249 aa17.59■□□□□ 0.41
LMNA-223ENST00000515459 KIAA0319Q5VV43 1072 aa17.59■□□□□ 0.41
LMNA-223ENST00000515459 GALNT17Q6IS24 598 aa17.59■□□□□ 0.41
LMNA-223ENST00000515459 RNF168Q8IYW5 571 aaPredicted RBP17.59■□□□□ 0.41
LMNA-223ENST00000515459 RNF149Q8NC42 400 aa17.59■□□□□ 0.41
LMNA-223ENST00000515459 KCNG4Q8TDN1 519 aa17.59■□□□□ 0.41
LMNA-223ENST00000515459 HDAC7Q8WUI4 952 aa17.59■□□□□ 0.41
LMNA-223ENST00000515459 TCP11Q8WWU5 503 aa17.59■□□□□ 0.41
LMNA-223ENST00000515459 SMG7Q92540 1137 aaKnown RBP17.59■□□□□ 0.41
LMNA-223ENST00000515459 RXFP1Q9HBX9 757 aa17.59■□□□□ 0.41
LMNA-223ENST00000515459 IPPQ9Y573 584 aa17.59■□□□□ 0.41
LMNA-223ENST00000515459 GVINP1Q7Z2Y8 2422 aa17.59■□□□□ 0.41
LMNA-223ENST00000515459 DOCK8Q8NF50 2099 aa17.59■□□□□ 0.41
LMNA-223ENST00000515459 ARL5CA6NH57 179 aa17.58■□□□□ 0.4
LMNA-223ENST00000515459 CPLX1O14810 134 aa17.58■□□□□ 0.4
LMNA-223ENST00000515459 GAS2O43903 313 aaKnown RBP17.58■□□□□ 0.4
LMNA-223ENST00000515459 NR1I2O75469 434 aa17.58■□□□□ 0.4
LMNA-223ENST00000515459 RFPL2O75678 378 aa17.58■□□□□ 0.4
LMNA-223ENST00000515459 EFEMP2O95967 443 aa17.58■□□□□ 0.4
LMNA-223ENST00000515459 LMNAP02545 664 aaKnown RBP17.58■□□□□ 0.4
LMNA-223ENST00000515459 MYBP10242 640 aa17.58■□□□□ 0.4
LMNA-223ENST00000515459 DSG1Q02413 1049 aa17.58■□□□□ 0.4
LMNA-223ENST00000515459 DSC1Q08554 894 aa17.58■□□□□ 0.4
LMNA-223ENST00000515459 PCBP1Q15365 356 aaKnown RBP eCLIP17.58■□□□□ 0.4
LMNA-223ENST00000515459 KRT25Q7Z3Z0 450 aa17.58■□□□□ 0.4
LMNA-223ENST00000515459 FERMT3Q86UX7 667 aa17.58■□□□□ 0.4
LMNA-223ENST00000515459 FAM177A1Q8N128 213 aaPredicted RBP17.58■□□□□ 0.4
LMNA-223ENST00000515459 FAM20AQ96MK3 541 aa17.58■□□□□ 0.4
LMNA-223ENST00000515459 MYADMQ96S97 322 aa17.58■□□□□ 0.4
LMNA-223ENST00000515459 GAD1Q99259 594 aa17.58■□□□□ 0.4
LMNA-223ENST00000515459 PLEKHA4Q9H4M7 779 aa17.58■□□□□ 0.4
LMNA-223ENST00000515459 PIDD1Q9HB75 910 aa17.58■□□□□ 0.4
LMNA-223ENST00000515459 KCNMB3Q9NPA1 279 aa17.58■□□□□ 0.4
LMNA-223ENST00000515459 BMP2KQ9NSY1 1161 aaPredicted RBP17.58■□□□□ 0.4
LMNA-223ENST00000515459 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.58■□□□□ 0.4
LMNA-223ENST00000515459 WRAP73Q9P2S5 460 aaPredicted RBP17.58■□□□□ 0.4
LMNA-223ENST00000515459 VAV3Q9UKW4 847 aa17.58■□□□□ 0.4
LMNA-223ENST00000515459 CA14Q9ULX7 337 aa17.58■□□□□ 0.4
LMNA-223ENST00000515459 C1RP00736 705 aa17.57■□□□□ 0.4
LMNA-223ENST00000515459 SPATA31D3P0C874 917 aa17.57■□□□□ 0.4
LMNA-223ENST00000515459 AXLP30530 894 aa17.57■□□□□ 0.4
LMNA-223ENST00000515459 YWHABP31946 246 aaKnown RBP17.57■□□□□ 0.4
LMNA-223ENST00000515459 MLH1P40692 756 aa17.57■□□□□ 0.4
LMNA-223ENST00000515459 NCBP1Q09161 790 aaKnown RBP17.57■□□□□ 0.4
LMNA-223ENST00000515459 EMC2Q15006 297 aa17.57■□□□□ 0.4
LMNA-223ENST00000515459 NPY5RQ15761 445 aa17.57■□□□□ 0.4
LMNA-223ENST00000515459 NOTUMQ6P988 496 aa17.57■□□□□ 0.4
LMNA-223ENST00000515459 SPATA31D4Q6ZUB0 917 aa17.57■□□□□ 0.4
LMNA-223ENST00000515459 OTUD6AQ7L8S5 288 aa17.57■□□□□ 0.4
LMNA-223ENST00000515459 C4orf19Q8IY42 314 aa17.57■□□□□ 0.4
LMNA-223ENST00000515459 ZNF707Q96C28 371 aaPredicted RBP17.57■□□□□ 0.4
LMNA-223ENST00000515459 LXNQ9BS40 222 aa17.57■□□□□ 0.4
LMNA-223ENST00000515459 COLEC11Q9BWP8 271 aa17.57■□□□□ 0.4
LMNA-223ENST00000515459 EIF2AQ9BY44 585 aaKnown RBP17.57■□□□□ 0.4
LMNA-223ENST00000515459 RNF39Q9H2S5 420 aa17.57■□□□□ 0.4
LMNA-223ENST00000515459 TBC1D17Q9HA65 648 aa17.57■□□□□ 0.4
LMNA-223ENST00000515459 CHST7Q9NS84 486 aa17.57■□□□□ 0.4
LMNA-223ENST00000515459 DCHS1Q96JQ0 3298 aa17.56■□□□□ 0.4
LMNA-223ENST00000515459 TSPAN1O60635 241 aa17.56■□□□□ 0.4
LMNA-223ENST00000515459 PAPLNO95428 1278 aa17.56■□□□□ 0.4
LMNA-223ENST00000515459 LAMP2P13473 410 aa17.56■□□□□ 0.4
LMNA-223ENST00000515459 SCNN1GP51170 649 aa17.56■□□□□ 0.4
LMNA-223ENST00000515459 PHLDB3Q6NSJ2 640 aa17.56■□□□□ 0.4
LMNA-223ENST00000515459 CENPQQ7L2Z9 268 aaPredicted RBP17.56■□□□□ 0.4
LMNA-223ENST00000515459 PALB2Q86YC2 1186 aa17.56■□□□□ 0.4
LMNA-223ENST00000515459 GPR152Q8TDT2 470 aa17.56■□□□□ 0.4
LMNA-223ENST00000515459 CCDC51Q96ER9 411 aa17.56■□□□□ 0.4
LMNA-223ENST00000515459 ZFP42Q96MM3 310 aa17.56■□□□□ 0.4
LMNA-223ENST00000515459 NT5C3AQ9H0P0 336 aa17.56■□□□□ 0.4
LMNA-223ENST00000515459 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.56■□□□□ 0.4
LMNA-223ENST00000515459 MIOSQ9NXC5 875 aa17.56■□□□□ 0.4
LMNA-223ENST00000515459 ZDHHC7Q9NXF8 308 aa17.56■□□□□ 0.4
LMNA-223ENST00000515459 HES2Q9Y543 173 aa17.56■□□□□ 0.4
LMNA-223ENST00000515459 CCDC194A0A1B0GVG4 234 aa17.55■□□□□ 0.4
LMNA-223ENST00000515459 F8W810 466 aa17.55■□□□□ 0.4
LMNA-223ENST00000515459 TGM5O43548 720 aa17.55■□□□□ 0.4
LMNA-223ENST00000515459 GCFC2P16383 781 aaKnown RBP17.55■□□□□ 0.4
LMNA-223ENST00000515459 PTENP60484 403 aa17.55■□□□□ 0.4
LMNA-223ENST00000515459 TOB2Q14106 344 aaPredicted RBP17.55■□□□□ 0.4
LMNA-223ENST00000515459 MXD4Q14582 209 aaPredicted RBP17.55■□□□□ 0.4
LMNA-223ENST00000515459 EPHA7Q15375 998 aa17.55■□□□□ 0.4
LMNA-223ENST00000515459 USP41Q3LFD5 358 aa17.55■□□□□ 0.4
LMNA-223ENST00000515459 XKR9Q5GH70 373 aa17.55■□□□□ 0.4
LMNA-223ENST00000515459 SPECC1Q5M775 1068 aa17.55■□□□□ 0.4
LMNA-223ENST00000515459 PPP4R3AQ6IN85 833 aa17.55■□□□□ 0.4
LMNA-223ENST00000515459 ZC3H14Q6PJT7 736 aaKnown RBP17.55■□□□□ 0.4
LMNA-223ENST00000515459 CPLX2Q6PUV4 134 aaKnown RBP17.55■□□□□ 0.4
LMNA-223ENST00000515459 RUFY3Q7L099 469 aa17.55■□□□□ 0.4
LMNA-223ENST00000515459 GET4Q7L5D6 327 aaPredicted RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms