RNA–Protein interactions for RNA: ENST00000514654.5

ATP2C1-222, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best)

Gene ATP2C1, Length 4,730 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-222ENST00000514654 APEX2Q9UBZ4 518 aa6.59□□□□□ -1.35
ATP2C1-222ENST00000514654 AGAP1Q9UPQ3 857 aa6.59□□□□□ -1.35
ATP2C1-222ENST00000514654 NOC2LQ9Y3T9 749 aaKnown RBP6.59□□□□□ -1.35
ATP2C1-222ENST00000514654 ARHGAP23Q9P227 1491 aa6.59□□□□□ -1.35
ATP2C1-222ENST00000514654 KIF20BQ96Q89 1820 aa6.59□□□□□ -1.35
ATP2C1-222ENST00000514654 ATMINO43313 823 aaPredicted RBP6.59□□□□□ -1.35
ATP2C1-222ENST00000514654 TJP3O95049 919 aa6.59□□□□□ -1.35
ATP2C1-222ENST00000514654 MT-ND3P03897 115 aa6.59□□□□□ -1.35
ATP2C1-222ENST00000514654 PGK2P07205 417 aa6.59□□□□□ -1.35
ATP2C1-222ENST00000514654 GSTA1P08263 222 aa6.59□□□□□ -1.35
ATP2C1-222ENST00000514654 GSTA2P09210 222 aa6.59□□□□□ -1.35
ATP2C1-222ENST00000514654 TBXAS1P24557 533 aaPredicted RBP6.59□□□□□ -1.35
ATP2C1-222ENST00000514654 COPB2P35606 906 aa6.59□□□□□ -1.35
ATP2C1-222ENST00000514654 CASP4P49662 377 aa6.59□□□□□ -1.35
ATP2C1-222ENST00000514654 IL9RQ01113 521 aa6.59□□□□□ -1.35
ATP2C1-222ENST00000514654 SEPT6Q14141 434 aa6.59□□□□□ -1.35
ATP2C1-222ENST00000514654 NAA25Q14CX7 972 aa6.59□□□□□ -1.35
ATP2C1-222ENST00000514654 SCYL3Q8IZE3 742 aa6.59□□□□□ -1.35
ATP2C1-222ENST00000514654 SKA2Q8WVK7 121 aaPredicted RBP6.59□□□□□ -1.35
ATP2C1-222ENST00000514654 CCDC68Q9H2F9 335 aa6.59□□□□□ -1.35
ATP2C1-222ENST00000514654 SYNGAP1Q96PV0 1343 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 CYTH3O43739 400 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 CREB3O43889 395 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 GMNNO75496 209 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 ICAM1P05362 532 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 CALB1P05937 261 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 C6orf222P0C671 652 aaPredicted RBP6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 GNAT1P11488 350 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 CA4P22748 312 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 PSMC6P62333 389 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 SEMA3FQ13275 785 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 CUL1Q13616 776 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 PRPSAP1Q14558 356 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 RPS6KA2Q15349 733 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 EDRF1Q3B7T1 1238 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 TKFCQ3LXA3 575 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 APOBEC3HQ6NTF7 200 aaKnown RBP6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 TEX2Q8IWB9 1127 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 TRIM59Q8IWR1 403 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 AFAP1L2Q8N4X5 818 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 SYT2Q8N9I0 419 aaPredicted RBP6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 FAF2Q96CS3 445 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.58□□□□□ -1.365e-8■■■■■ 28.6
ATP2C1-222ENST00000514654 STK33Q9BYT3 514 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 EDEM3Q9BZQ6 932 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 RIOX1Q9H6W3 641 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 PIN4Q9Y237 131 aaKnown RBP6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 NEURL4Q96JN8 1562 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 CCL15-CCL14A0A0B4J2E2 113 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 TADA3O75528 432 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 SDC4P31431 198 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 RGS7P49802 495 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 TPD52P55327 224 aaPredicted RBP6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 SNAPC2Q13487 334 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 CCL15Q16663 113 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 SYCP2LQ5T4T6 812 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 ALS2CLQ60I27 953 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 SLC35G2Q8TBE7 412 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 RNPC3Q96LT9 517 aaKnown RBP6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 CFAP57Q96MR6 1250 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 FAM118BQ9BPY3 351 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 ADAM33Q9BZ11 813 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 CPSF3Q9UKF6 684 aaKnown RBP6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 SNX12Q9UMY4 172 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 G3BP2Q9UN86 482 aaKnown RBP6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 SNX9Q9Y5X1 595 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 ADGRB2O60241 1585 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 SLC16A3O15427 465 aaKnown RBP6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 WEE2P0C1S8 567 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 RPS12P25398 132 aaKnown RBP6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 ZNF157P51786 506 aaPredicted RBP6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 EFNA5P52803 228 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 ACTR2P61160 394 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 NCOA4Q13772 614 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 ARHGEF6Q15052 776 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 PCGF5Q86SE9 256 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 NUDT12Q9BQG2 462 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 FUCA2Q9BTY2 467 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 HAUS2Q9NVX0 235 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 ADAM21Q9UKJ8 722 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 POLIQ9UNA4 740 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 TMX2Q9Y320 296 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 PODXLO00592 558 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 PDGFRBP09619 1106 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 KLRC1P26715 233 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 NME3Q13232 169 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 TSTA3Q13630 321 aaPredicted RBP6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 RCN2Q14257 317 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 CCDC137Q6PK04 289 aaKnown RBP6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 MMS22LQ6ZRQ5 1243 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 CENPUQ71F23 418 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 ZC3H18Q86VM9 953 aaKnown RBP6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 CCDC197Q8NCU1 140 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 RBM41Q96IZ5 413 aaKnown RBP6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 ACAP3Q96P50 834 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 KBTBD4Q9NVX7 518 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 ASNSD1Q9NWL6 643 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 FIS1Q9Y3D6 152 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 DUSP10Q9Y6W6 482 aa6.58□□□□□ -1.36
ATP2C1-222ENST00000514654 A0A087X0B3 334 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms