RNA–Protein interactions for RNA: ENST00000514621.5

HIPK1-210, Transcript of homeodomain interacting protein kinase 1, human

TSL 4

Gene HIPK1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HIPK1-210	ENST00000514621	ERCC5	P28715	1186 aa	Predicted RBP	7.65	□□□□□ -1.18
HIPK1-210	ENST00000514621	HSPA4	P34932	840 aa		7.65	□□□□□ -1.18
HIPK1-210	ENST00000514621	USP14	P54578	494 aa		7.65	□□□□□ -1.18
HIPK1-210	ENST00000514621	CRHR2	Q13324	411 aa		7.65	□□□□□ -1.18
HIPK1-210	ENST00000514621	NECTIN1	Q15223	517 aa		7.65	□□□□□ -1.18
HIPK1-210	ENST00000514621	SLC14A2	Q15849	920 aa		7.65	□□□□□ -1.18
HIPK1-210	ENST00000514621	KIAA1755	Q5JYT7	1200 aa		7.65	□□□□□ -1.18
HIPK1-210	ENST00000514621	AXDND1	Q5T1B0	1012 aa	Predicted RBP	7.65	□□□□□ -1.18
HIPK1-210	ENST00000514621	CREB3L3	Q68CJ9	461 aa		7.65	□□□□□ -1.18
HIPK1-210	ENST00000514621	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	7.65	□□□□□ -1.18
HIPK1-210	ENST00000514621	MKL1	Q969V6	931 aa		7.65	□□□□□ -1.18
HIPK1-210	ENST00000514621	C12orf42	Q96LP6	360 aa		7.65	□□□□□ -1.18
HIPK1-210	ENST00000514621	PLIN4	Q96Q06	1357 aa		7.65	□□□□□ -1.18
HIPK1-210	ENST00000514621	DIRC2	Q96SL1	478 aa		7.65	□□□□□ -1.18
HIPK1-210	ENST00000514621	SLC6A17	Q9H1V8	727 aa		7.65	□□□□□ -1.18
HIPK1-210	ENST00000514621	NSUN3	Q9H649	340 aa	Known RBP	7.65	□□□□□ -1.18
HIPK1-210	ENST00000514621	SH2D4A	Q9H788	454 aa		7.65	□□□□□ -1.18
HIPK1-210	ENST00000514621	ZCCHC17	Q9NP64	241 aa	Known RBP	7.65	□□□□□ -1.18
HIPK1-210	ENST00000514621	TCP11L1	Q9NUJ3	509 aa		7.65	□□□□□ -1.18
HIPK1-210	ENST00000514621	NYAP2	Q9P242	653 aa		7.65	□□□□□ -1.18
HIPK1-210	ENST00000514621	CLIP2	Q9UDT6	1046 aa		7.65	□□□□□ -1.18
HIPK1-210	ENST00000514621	AGTPBP1	Q9UPW5	1226 aa		7.65	□□□□□ -1.18
HIPK1-210	ENST00000514621	SLC45A1	Q9Y2W3	748 aa		7.65	□□□□□ -1.18
HIPK1-210	ENST00000514621	SNX14	Q9Y5W7	946 aa		7.65	□□□□□ -1.18
HIPK1-210	ENST00000514621	DBX1	A6NMT0	343 aa		7.64	□□□□□ -1.19
HIPK1-210	ENST00000514621		E7EWF7	191 aa		7.64	□□□□□ -1.19
HIPK1-210	ENST00000514621	ZNF205	O95201	554 aa		7.64	□□□□□ -1.19
HIPK1-210	ENST00000514621	TTLL1	O95922	423 aa		7.64	□□□□□ -1.19
HIPK1-210	ENST00000514621	CYP2C8	P10632	490 aa		7.64	□□□□□ -1.19
HIPK1-210	ENST00000514621	VAV1	P15498	845 aa		7.64	□□□□□ -1.19
HIPK1-210	ENST00000514621	VCAM1	P19320	739 aa		7.64	□□□□□ -1.19
HIPK1-210	ENST00000514621	CD247	P20963	164 aa		7.64	□□□□□ -1.19
HIPK1-210	ENST00000514621	HOXA7	P31268	230 aa	Predicted RBP	7.64	□□□□□ -1.19
HIPK1-210	ENST00000514621	CTSK	P43235	329 aa		7.64	□□□□□ -1.19
HIPK1-210	ENST00000514621	NOV	P48745	357 aa		7.64	□□□□□ -1.19
HIPK1-210	ENST00000514621	CTCF	P49711	727 aa	Predicted RBP	7.64	□□□□□ -1.19
HIPK1-210	ENST00000514621	LBX1	P52954	281 aa		7.64	□□□□□ -1.19
HIPK1-210	ENST00000514621	TCEAL1	Q15170	157 aa		7.64	□□□□□ -1.19
HIPK1-210	ENST00000514621	TIGD5	Q53EQ6	642 aa		7.64	□□□□□ -1.19
HIPK1-210	ENST00000514621	CWF19L1	Q69YN2	538 aa	Known RBP	7.64	□□□□□ -1.19
HIPK1-210	ENST00000514621	STOX1	Q6ZVD7	989 aa		7.64	□□□□□ -1.19
HIPK1-210	ENST00000514621	ESR2	Q92731	530 aa		7.64	□□□□□ -1.19
HIPK1-210	ENST00000514621	SHD	Q96IW2	340 aa		7.64	□□□□□ -1.19
HIPK1-210	ENST00000514621	FCRL2	Q96LA5	508 aa	Predicted RBP	7.64	□□□□□ -1.19
HIPK1-210	ENST00000514621	UPF3B	Q9BZI7	483 aa	Known RBP	7.64	□□□□□ -1.19
HIPK1-210	ENST00000514621	KRT23	Q9C075	422 aa		7.64	□□□□□ -1.19
HIPK1-210	ENST00000514621	VCPKMT	Q9H867	229 aa		7.64	□□□□□ -1.19
HIPK1-210	ENST00000514621	GP6	Q9HCN6	339 aa		7.64	□□□□□ -1.19
HIPK1-210	ENST00000514621	ARID1B	Q8NFD5	2236 aa	Predicted RBP	7.63	□□□□□ -1.19
HIPK1-210	ENST00000514621	ADGRA2	Q96PE1	1338 aa		7.63	□□□□□ -1.19
HIPK1-210	ENST00000514621	GREB1L	Q9C091	1923 aa	Predicted RBP	7.63	□□□□□ -1.19
HIPK1-210	ENST00000514621		A0A1W2PQH9	124 aa		7.63	□□□□□ -1.19
HIPK1-210	ENST00000514621		F5H6K3	240 aa		7.63	□□□□□ -1.19
HIPK1-210	ENST00000514621	TLR2	O60603	784 aa		7.63	□□□□□ -1.19
HIPK1-210	ENST00000514621	NDUFB10	O96000	172 aa		7.63	□□□□□ -1.19
HIPK1-210	ENST00000514621	CPA1	P15085	419 aa		7.63	□□□□□ -1.19
HIPK1-210	ENST00000514621	NT5C2	P49902	561 aa		7.63	□□□□□ -1.19
HIPK1-210	ENST00000514621	KLRC3	Q07444	240 aa		7.63	□□□□□ -1.19
HIPK1-210	ENST00000514621	TRDN	Q13061	729 aa		7.63	□□□□□ -1.19
HIPK1-210	ENST00000514621	PABPC4	Q13310	644 aa	Known RBP eCLIP	7.63	□□□□□ -1.19
HIPK1-210	ENST00000514621	GNPTAB	Q3T906	1256 aa		7.63	□□□□□ -1.19
HIPK1-210	ENST00000514621	RCSD1	Q6JBY9	416 aa		7.63	□□□□□ -1.19
HIPK1-210	ENST00000514621	CRTC3	Q6UUV7	619 aa		7.63	□□□□□ -1.19
HIPK1-210	ENST00000514621	CATSPERG	Q6ZRH7	1159 aa		7.63	□□□□□ -1.19
HIPK1-210	ENST00000514621	CEP128	Q6ZU80	1094 aa		7.63	□□□□□ -1.19
HIPK1-210	ENST00000514621	NOL8	Q76FK4	1167 aa	Known RBP	7.63	□□□□□ -1.19
HIPK1-210	ENST00000514621	CYB5R4	Q7L1T6	521 aa		7.63	□□□□□ -1.19
HIPK1-210	ENST00000514621	SPICE1	Q8N0Z3	855 aa		7.63	□□□□□ -1.19
HIPK1-210	ENST00000514621	LRRC47	Q8N1G4	583 aa	Known RBP	7.63	□□□□□ -1.19
HIPK1-210	ENST00000514621	FBXO15	Q8NCQ5	510 aa	Predicted RBP	7.63	□□□□□ -1.19
HIPK1-210	ENST00000514621	LPAR1	Q92633	364 aa		7.63	□□□□□ -1.19
HIPK1-210	ENST00000514621	JAKMIP1	Q96N16	626 aa	Known RBP	7.63	□□□□□ -1.19
HIPK1-210	ENST00000514621	TTC14	Q96N46	770 aa		7.63	□□□□□ -1.19
HIPK1-210	ENST00000514621	PPP1R16B	Q96T49	567 aa		7.63	□□□□□ -1.19
HIPK1-210	ENST00000514621	PARK7	Q99497	189 aa	Known RBP	7.63	□□□□□ -1.19
HIPK1-210	ENST00000514621	P2RX7	Q99572	595 aa	Known RBP	7.63	□□□□□ -1.19
HIPK1-210	ENST00000514621	CDADC1	Q9BWV3	514 aa		7.63	□□□□□ -1.19
HIPK1-210	ENST00000514621	EPB41L4B	Q9H329	900 aa		7.63	□□□□□ -1.19
HIPK1-210	ENST00000514621	RPAP3	Q9H6T3	665 aa	Predicted RBP	7.63	□□□□□ -1.19
HIPK1-210	ENST00000514621	CAPN10	Q9HC96	672 aa		7.63	□□□□□ -1.19
HIPK1-210	ENST00000514621	FAM86C1	Q9NVL1	165 aa		7.63	□□□□□ -1.19
HIPK1-210	ENST00000514621	TNFRSF10D	Q9UBN6	386 aa		7.63	□□□□□ -1.19
HIPK1-210	ENST00000514621	SYNPO2	Q9UMS6	1093 aa		7.63	□□□□□ -1.19
HIPK1-210	ENST00000514621	STX8	Q9UNK0	236 aa		7.63	□□□□□ -1.19
HIPK1-210	ENST00000514621	YBX2	Q9Y2T7	364 aa	Known RBP	7.63	□□□□□ -1.19
HIPK1-210	ENST00000514621	FHOD1	Q9Y613	1164 aa		7.63	□□□□□ -1.19
HIPK1-210	ENST00000514621	PTPRF	P10586	1907 aa		7.62	□□□□□ -1.19
HIPK1-210	ENST00000514621	LOC285556	D6RIA3	1793 aa		7.62	□□□□□ -1.19
HIPK1-210	ENST00000514621	KRTAP4-8	A0A0G2JLE6	195 aa		7.62	□□□□□ -1.19
HIPK1-210	ENST00000514621	WDR46	O15213	610 aa	Known RBP	7.62	□□□□□ -1.19
HIPK1-210	ENST00000514621	EPB41L2	O43491	1005 aa	Known RBP	7.62	□□□□□ -1.19
HIPK1-210	ENST00000514621	NRDC	O43847	1150 aa		7.62	□□□□□ -1.19
HIPK1-210	ENST00000514621	PSPN	O60542	156 aa		7.62	□□□□□ -1.19
HIPK1-210	ENST00000514621	TSPAN15	O95858	294 aa		7.62	□□□□□ -1.19
HIPK1-210	ENST00000514621	TOP1	P11387	765 aa	Known RBP	7.62	□□□□□ -1.19
HIPK1-210	ENST00000514621	ITGA4	P13612	1032 aa		7.62	□□□□□ -1.19
HIPK1-210	ENST00000514621	ZKSCAN1	P17029	563 aa	Predicted RBP	7.62	□□□□□ -1.19
HIPK1-210	ENST00000514621	CAST	P20810	708 aa	Known RBP	7.62	□□□□□ -1.19
HIPK1-210	ENST00000514621	ZNF445	P59923	1031 aa		7.62	□□□□□ -1.19
HIPK1-210	ENST00000514621	ANAPC15	P60006	121 aa		7.62	□□□□□ -1.19

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms