RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-223	ENST00000514402	KLRG2	A4D1S0	409 aa	Predicted RBP	5.81	□□□□□ -1.48
MATR3-223	ENST00000514402		K7ESF4	209 aa		5.81	□□□□□ -1.48
MATR3-223	ENST00000514402	TMEM127	O75204	238 aa		5.81	□□□□□ -1.48
MATR3-223	ENST00000514402	PPFIA4	O75335	1185 aa		5.81	□□□□□ -1.48
MATR3-223	ENST00000514402	FSHB	P01225	129 aa		5.81	□□□□□ -1.48
MATR3-223	ENST00000514402	LPL	P06858	475 aa		5.81	□□□□□ -1.48
MATR3-223	ENST00000514402	C1S	P09871	688 aa		5.81	□□□□□ -1.48
MATR3-223	ENST00000514402	MCM7	P33993	719 aa		5.81	□□□□□ -1.48
MATR3-223	ENST00000514402	SCNN1G	P51170	649 aa		5.81	□□□□□ -1.48
MATR3-223	ENST00000514402	ABHD18	Q0P651	414 aa		5.81	□□□□□ -1.48
MATR3-223	ENST00000514402	FAM180A	Q6UWF9	173 aa		5.81	□□□□□ -1.48
MATR3-223	ENST00000514402	ELOA2	Q8IYF1	753 aa	Predicted RBP	5.81	□□□□□ -1.48
MATR3-223	ENST00000514402	MSL3	Q8N5Y2	521 aa	Known RBP	5.81	□□□□□ -1.48
MATR3-223	ENST00000514402	AMER2	Q8N7J2	671 aa		5.81	□□□□□ -1.48
MATR3-223	ENST00000514402	WDR66	Q8TBY9	1149 aa		5.81	□□□□□ -1.48
MATR3-223	ENST00000514402	AUTS2	Q8WXX7	1259 aa		5.81	□□□□□ -1.48
MATR3-223	ENST00000514402	EAF2	Q96CJ1	260 aa	Predicted RBP	5.81	□□□□□ -1.48
MATR3-223	ENST00000514402	MNT	Q99583	582 aa		5.81	□□□□□ -1.48
MATR3-223	ENST00000514402	RPTOR	Q8N122	1335 aa		5.8	□□□□□ -1.48
MATR3-223	ENST00000514402	CRHR1	P34998	444 aa		5.8	□□□□□ -1.48
MATR3-223	ENST00000514402	CASR	P41180	1078 aa		5.8	□□□□□ -1.48
MATR3-223	ENST00000514402	TMPRSS15	P98073	1019 aa		5.8	□□□□□ -1.48
MATR3-223	ENST00000514402	PDZD4	Q76G19	769 aa	Predicted RBP	5.8	□□□□□ -1.48
MATR3-223	ENST00000514402	SORCS2	Q96PQ0	1159 aa		5.8	□□□□□ -1.48
MATR3-223	ENST00000514402	KRTAP9-8	Q9BYQ0	159 aa		5.8	□□□□□ -1.48
MATR3-223	ENST00000514402	PRDM12	Q9H4Q4	367 aa		5.8	□□□□□ -1.48
MATR3-223	ENST00000514402	MCM8	Q9UJA3	840 aa		5.8	□□□□□ -1.48
MATR3-223	ENST00000514402	GOLGA8A	A7E2F4	631 aa		5.79	□□□□□ -1.48
MATR3-223	ENST00000514402	NPIPB8	E9PQR5	432 aa		5.79	□□□□□ -1.48
MATR3-223	ENST00000514402	PRAMEF4	O60810	478 aa		5.79	□□□□□ -1.48
MATR3-223	ENST00000514402	DNAJC6	O75061	913 aa		5.79	□□□□□ -1.48
MATR3-223	ENST00000514402	ZNF202	O95125	648 aa		5.79	□□□□□ -1.48
MATR3-223	ENST00000514402	MAK	P20794	623 aa		5.79	□□□□□ -1.48
MATR3-223	ENST00000514402	CTSS	P25774	331 aa		5.79	□□□□□ -1.48
MATR3-223	ENST00000514402	TOB2	Q14106	344 aa	Predicted RBP	5.79	□□□□□ -1.48
MATR3-223	ENST00000514402	C1QL3	Q5VWW1	255 aa		5.79	□□□□□ -1.48
MATR3-223	ENST00000514402	BTNL9	Q6UXG8	535 aa		5.79	□□□□□ -1.48
MATR3-223	ENST00000514402	ZNF480	Q8WV37	535 aa		5.79	□□□□□ -1.48
MATR3-223	ENST00000514402	FATE1	Q969F0	183 aa		5.79	□□□□□ -1.48
MATR3-223	ENST00000514402	AHCYL2	Q96HN2	611 aa	Known RBP	5.79	□□□□□ -1.48
MATR3-223	ENST00000514402	CDC5L	Q99459	802 aa	Known RBP	5.79	□□□□□ -1.48
MATR3-223	ENST00000514402	CPPED1	Q9BRF8	314 aa	Predicted RBP	5.79	□□□□□ -1.48
MATR3-223	ENST00000514402	EPC1	Q9H2F5	836 aa		5.79	□□□□□ -1.48
MATR3-223	ENST00000514402	SPC25	Q9HBM1	224 aa		5.79	□□□□□ -1.48
MATR3-223	ENST00000514402	DPP7	Q9UHL4	492 aa		5.79	□□□□□ -1.48
MATR3-223	ENST00000514402		B5MCH6	92 aa		5.78	□□□□□ -1.48
MATR3-223	ENST00000514402	TRIM24	O15164	1050 aa		5.78	□□□□□ -1.48
MATR3-223	ENST00000514402	NARS	O43776	548 aa	Known RBP	5.78	□□□□□ -1.48
MATR3-223	ENST00000514402	STC2	O76061	302 aa		5.78	□□□□□ -1.48
MATR3-223	ENST00000514402	HSP90B1	P14625	803 aa	Known RBP	5.78	□□□□□ -1.48
MATR3-223	ENST00000514402	PTGS2	P35354	604 aa		5.78	□□□□□ -1.48
MATR3-223	ENST00000514402	APBA1	Q02410	837 aa		5.78	□□□□□ -1.48
MATR3-223	ENST00000514402	MUM1	Q2TAK8	710 aa		5.78	□□□□□ -1.48
MATR3-223	ENST00000514402	RABL3	Q5HYI8	236 aa		5.78	□□□□□ -1.48
MATR3-223	ENST00000514402	KCNK18	Q7Z418	384 aa		5.78	□□□□□ -1.48
MATR3-223	ENST00000514402	MB21D1	Q8N884	522 aa		5.78	□□□□□ -1.48
MATR3-223	ENST00000514402	OR52N2	Q8NGI0	321 aa		5.78	□□□□□ -1.48
MATR3-223	ENST00000514402	ZNF483	Q8TF39	744 aa	Predicted RBP	5.78	□□□□□ -1.48
MATR3-223	ENST00000514402	PCED1A	Q9H1Q7	454 aa		5.78	□□□□□ -1.48
MATR3-223	ENST00000514402	GPRC5D	Q9NZD1	345 aa		5.78	□□□□□ -1.48
MATR3-223	ENST00000514402	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	5.78	□□□□□ -1.48
MATR3-223	ENST00000514402	HDAC5	Q9UQL6	1122 aa		5.78	□□□□□ -1.48
MATR3-223	ENST00000514402	HS3ST3A1	Q9Y663	406 aa		5.78	□□□□□ -1.48
MATR3-223	ENST00000514402	IGSF3	O75054	1194 aa		5.77	□□□□□ -1.49
MATR3-223	ENST00000514402	ITGA10	O75578	1167 aa		5.77	□□□□□ -1.49
MATR3-223	ENST00000514402	RECQL4	O94761	1208 aa		5.77	□□□□□ -1.49
MATR3-223	ENST00000514402	SLC5A3	P53794	718 aa		5.77	□□□□□ -1.49
MATR3-223	ENST00000514402	DGCR2	P98153	550 aa		5.77	□□□□□ -1.49
MATR3-223	ENST00000514402	PURA	Q00577	322 aa	Known RBP	5.77	□□□□□ -1.49
MATR3-223	ENST00000514402	VPS72	Q15906	364 aa		5.77	□□□□□ -1.49
MATR3-223	ENST00000514402	MST1L	Q2TV78	715 aa		5.77	□□□□□ -1.49
MATR3-223	ENST00000514402	RNF187	Q5TA31	235 aa	Predicted RBP	5.77	□□□□□ -1.49
MATR3-223	ENST00000514402	DRICH1	Q6PGQ1	229 aa	Predicted RBP	5.77	□□□□□ -1.49
MATR3-223	ENST00000514402	ABHD15	Q6UXT9	468 aa		5.77	□□□□□ -1.49
MATR3-223	ENST00000514402	GPRIN1	Q7Z2K8	1008 aa		5.77	□□□□□ -1.49
MATR3-223	ENST00000514402	NECAB2	Q7Z6G3	386 aa		5.77	□□□□□ -1.49
MATR3-223	ENST00000514402	ATL2	Q8NHH9	583 aa		5.77	□□□□□ -1.49
MATR3-223	ENST00000514402	SSH1	Q8WYL5	1049 aa		5.77	□□□□□ -1.49
MATR3-223	ENST00000514402	MENT	Q9BUN1	341 aa		5.77	□□□□□ -1.49
MATR3-223	ENST00000514402	SCAND2P	Q9GZW5	306 aa	Predicted RBP	5.77	□□□□□ -1.49
MATR3-223	ENST00000514402	IFT122	Q9HBG6	1241 aa		5.77	□□□□□ -1.49
MATR3-223	ENST00000514402	C14orf119	Q9NWQ9	140 aa		5.77	□□□□□ -1.49
MATR3-223	ENST00000514402	TRPS1	Q9UHF7	1281 aa		5.77	□□□□□ -1.49
MATR3-223	ENST00000514402	SCOC	Q9UIL1	159 aa		5.77	□□□□□ -1.49
MATR3-223	ENST00000514402	PHLDB1	Q86UU1	1377 aa		5.77	□□□□□ -1.49
MATR3-223	ENST00000514402	CADPS	Q9ULU8	1353 aa		5.77	□□□□□ -1.49
MATR3-223	ENST00000514402	WASHC2A	Q641Q2	1341 aa		5.76	□□□□□ -1.49
MATR3-223	ENST00000514402	PRR5-ARHGAP8	B1AHC4	643 aa		5.76	□□□□□ -1.49
MATR3-223	ENST00000514402	DIRC3	C9JPN6	131 aa		5.76	□□□□□ -1.49
MATR3-223	ENST00000514402	PRKD3	O94806	890 aa		5.76	□□□□□ -1.49
MATR3-223	ENST00000514402	POU3F3	P20264	500 aa	Predicted RBP	5.76	□□□□□ -1.49
MATR3-223	ENST00000514402	MGAT1	P26572	445 aa		5.76	□□□□□ -1.49
MATR3-223	ENST00000514402	ADRM1	Q16186	407 aa		5.76	□□□□□ -1.49
MATR3-223	ENST00000514402	FAM214A	Q32MH5	1076 aa		5.76	□□□□□ -1.49
MATR3-223	ENST00000514402	LILRA3	Q8N6C8	439 aa	Predicted RBP	5.76	□□□□□ -1.49
MATR3-223	ENST00000514402	GPR156	Q8NFN8	814 aa		5.76	□□□□□ -1.49
MATR3-223	ENST00000514402	TSPEAR	Q8WU66	669 aa		5.76	□□□□□ -1.49
MATR3-223	ENST00000514402	DCLRE1C	Q96SD1	692 aa	Known RBP	5.76	□□□□□ -1.49
MATR3-223	ENST00000514402	LSM14B	Q9BX40	385 aa	Known RBP	5.76	□□□□□ -1.49
MATR3-223	ENST00000514402	QRSL1	Q9H0R6	528 aa	Known RBP	5.76	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms