RNA–Protein interactions for RNA: ENST00000513582.5

PDCD6-210, Transcript of programmed cell death 6, human

TSL 2

Gene PDCD6, Length 3,500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD6-210	ENST00000513582	MYMK	A6NI61	221 aa		11.91	□□□□□ -0.5
PDCD6-210	ENST00000513582	ANKRD63	C9JTQ0	380 aa		11.91	□□□□□ -0.5
PDCD6-210	ENST00000513582	CYP4A11	Q02928	519 aa		11.91	□□□□□ -0.5
PDCD6-210	ENST00000513582	TMEM266	Q2M3C6	531 aa		11.91	□□□□□ -0.5
PDCD6-210	ENST00000513582	ACSBG2	Q5FVE4	666 aa		11.91	□□□□□ -0.5
PDCD6-210	ENST00000513582	C4orf50	Q6ZRC1	276 aa		11.91	□□□□□ -0.5
PDCD6-210	ENST00000513582	SESTD1	Q86VW0	696 aa		11.91	□□□□□ -0.5
PDCD6-210	ENST00000513582	SCYL3	Q8IZE3	742 aa		11.91	□□□□□ -0.5
PDCD6-210	ENST00000513582	SYN2	Q92777	582 aa	Predicted RBP	11.91	□□□□□ -0.5
PDCD6-210	ENST00000513582	EDEM3	Q9BZQ6	932 aa		11.91	□□□□□ -0.5
PDCD6-210	ENST00000513582	WASF2	Q9Y6W5	498 aa		11.91	□□□□□ -0.5
PDCD6-210	ENST00000513582	MYH4	Q9Y623	1939 aa		11.91	□□□□□ -0.5
PDCD6-210	ENST00000513582	SIPA1L3	O60292	1781 aa	Predicted RBP	11.91	□□□□□ -0.5
PDCD6-210	ENST00000513582	RBM47	A0AV96	593 aa	Known RBP	11.91	□□□□□ -0.5
PDCD6-210	ENST00000513582	PALM3	A6NDB9	673 aa	Predicted RBP	11.91	□□□□□ -0.5
PDCD6-210	ENST00000513582	TMEM110-MUSTN1	A8MSY1	372 aa		11.91	□□□□□ -0.5
PDCD6-210	ENST00000513582	OPHN1	O60890	802 aa		11.91	□□□□□ -0.5
PDCD6-210	ENST00000513582	SPAG7	O75391	227 aa		11.91	□□□□□ -0.5
PDCD6-210	ENST00000513582	LMNA	P02545	664 aa	Known RBP	11.91	□□□□□ -0.5
PDCD6-210	ENST00000513582	H2AFZ	P0C0S5	128 aa		11.91	□□□□□ -0.5
PDCD6-210	ENST00000513582	TAC1	P20366	129 aa		11.91	□□□□□ -0.5
PDCD6-210	ENST00000513582	SERPINB3	P29508	390 aa		11.91	□□□□□ -0.5
PDCD6-210	ENST00000513582	GIT2	Q14161	759 aa		11.91	□□□□□ -0.5
PDCD6-210	ENST00000513582	LIN52	Q52LA3	116 aa		11.91	□□□□□ -0.5
PDCD6-210	ENST00000513582	DPY19L2	Q6NUT2	758 aa		11.91	□□□□□ -0.5
PDCD6-210	ENST00000513582	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	11.91	□□□□□ -0.5
PDCD6-210	ENST00000513582	H2AFV	Q71UI9	128 aa		11.91	□□□□□ -0.5
PDCD6-210	ENST00000513582	SV2B	Q7L1I2	683 aa		11.91	□□□□□ -0.5
PDCD6-210	ENST00000513582	AGBL1	Q96MI9	1066 aa		11.91	□□□□□ -0.5
PDCD6-210	ENST00000513582	PIGS	Q96S52	555 aa		11.91	□□□□□ -0.5
PDCD6-210	ENST00000513582	ZBTB21	Q9ULJ3	1066 aa		11.91	□□□□□ -0.5
PDCD6-210	ENST00000513582	MEIS1	O00470	390 aa		11.9	□□□□□ -0.5
PDCD6-210	ENST00000513582	TMCC1	O94876	653 aa		11.9	□□□□□ -0.5
PDCD6-210	ENST00000513582	SLC9A1	P19634	815 aa		11.9	□□□□□ -0.5
PDCD6-210	ENST00000513582	KCNJ1	P48048	391 aa		11.9	□□□□□ -0.5
PDCD6-210	ENST00000513582	GTF2I	P78347	998 aa		11.9	□□□□□ -0.5
PDCD6-210	ENST00000513582	SLC34A1	Q06495	639 aa		11.9	□□□□□ -0.5
PDCD6-210	ENST00000513582	HERC4	Q5GLZ8	1057 aa	Predicted RBP	11.9	□□□□□ -0.5
PDCD6-210	ENST00000513582	RNF168	Q8IYW5	571 aa	Predicted RBP	11.9	□□□□□ -0.5
PDCD6-210	ENST00000513582	CYP4X1	Q8N118	509 aa		11.9	□□□□□ -0.5
PDCD6-210	ENST00000513582	INPP5D	Q92835	1189 aa		11.9	□□□□□ -0.5
PDCD6-210	ENST00000513582	AZIN2	Q96A70	460 aa		11.9	□□□□□ -0.5
PDCD6-210	ENST00000513582	MPP4	Q96JB8	637 aa		11.9	□□□□□ -0.5
PDCD6-210	ENST00000513582	EYA3	Q99504	573 aa		11.9	□□□□□ -0.5
PDCD6-210	ENST00000513582	CENPK	Q9BS16	269 aa		11.9	□□□□□ -0.5
PDCD6-210	ENST00000513582	MAF1	Q9H063	256 aa		11.9	□□□□□ -0.5
PDCD6-210	ENST00000513582	PHTF1	Q9UMS5	762 aa		11.9	□□□□□ -0.5
PDCD6-210	ENST00000513582	PENK	P01210	267 aa	Predicted RBP	11.9	□□□□□ -0.5
PDCD6-210	ENST00000513582	PPP1R2	P41236	205 aa		11.9	□□□□□ -0.5
PDCD6-210	ENST00000513582	LSAMP	Q13449	338 aa		11.9	□□□□□ -0.5
PDCD6-210	ENST00000513582	RBM26	Q5T8P6	1007 aa	Known RBP	11.9	□□□□□ -0.5
PDCD6-210	ENST00000513582	BTNL9	Q6UXG8	535 aa		11.9	□□□□□ -0.5
PDCD6-210	ENST00000513582	CROCCP2	Q86T23	111 aa		11.9	□□□□□ -0.5
PDCD6-210	ENST00000513582	ARHGAP18	Q8N392	663 aa		11.9	□□□□□ -0.5
PDCD6-210	ENST00000513582	CLMN	Q96JQ2	1002 aa		11.9	□□□□□ -0.5
PDCD6-210	ENST00000513582	FAM84B	Q96KN1	310 aa	Predicted RBP	11.9	□□□□□ -0.5
PDCD6-210	ENST00000513582	MAGEB18	Q96M61	343 aa		11.9	□□□□□ -0.5
PDCD6-210	ENST00000513582	IWS1	Q96ST2	819 aa		11.9	□□□□□ -0.5
PDCD6-210	ENST00000513582	ZNF184	Q99676	751 aa	Predicted RBP	11.9	□□□□□ -0.5
PDCD6-210	ENST00000513582	MIPEP	Q99797	713 aa		11.9	□□□□□ -0.5
PDCD6-210	ENST00000513582	CDC42EP4	Q9H3Q1	356 aa	Known RBP	11.9	□□□□□ -0.5
PDCD6-210	ENST00000513582	C6orf50	Q9HD87	102 aa		11.9	□□□□□ -0.5
PDCD6-210	ENST00000513582	DCP1A	Q9NPI6	582 aa	Predicted RBP	11.9	□□□□□ -0.5
PDCD6-210	ENST00000513582	CLIC5	Q9NZA1	410 aa		11.9	□□□□□ -0.5
PDCD6-210	ENST00000513582	PITPNM2	Q9BZ72	1349 aa		11.9	□□□□□ -0.5
PDCD6-210	ENST00000513582	TNS3	Q68CZ2	1445 aa		11.9	□□□□□ -0.5
PDCD6-210	ENST00000513582	FLT1	P17948	1338 aa		11.9	□□□□□ -0.51
PDCD6-210	ENST00000513582		A0A1W2PRG0	241 aa		11.9	□□□□□ -0.51
PDCD6-210	ENST00000513582	UBAP1L	F5GYI3	381 aa		11.9	□□□□□ -0.51
PDCD6-210	ENST00000513582	OCRL	Q01968	901 aa		11.9	□□□□□ -0.51
PDCD6-210	ENST00000513582	CCDC15	Q0P6D6	951 aa		11.9	□□□□□ -0.51
PDCD6-210	ENST00000513582	PPP2R5C	Q13362	524 aa		11.9	□□□□□ -0.51
PDCD6-210	ENST00000513582	PPP2R5B	Q15173	497 aa		11.9	□□□□□ -0.51
PDCD6-210	ENST00000513582	WDR72	Q3MJ13	1102 aa		11.9	□□□□□ -0.51
PDCD6-210	ENST00000513582	KRT79	Q5XKE5	535 aa		11.9	□□□□□ -0.51
PDCD6-210	ENST00000513582	ARHGEF18	Q6ZSZ5	1173 aa		11.9	□□□□□ -0.51
PDCD6-210	ENST00000513582	SPATA24	Q86W54	205 aa		11.9	□□□□□ -0.51
PDCD6-210	ENST00000513582	CCDC105	Q8IYK2	499 aa		11.9	□□□□□ -0.51
PDCD6-210	ENST00000513582	SYCE1	Q8N0S2	351 aa		11.9	□□□□□ -0.51
PDCD6-210	ENST00000513582	TBCK	Q8TEA7	893 aa		11.9	□□□□□ -0.51
PDCD6-210	ENST00000513582	HES6	Q96HZ4	224 aa		11.9	□□□□□ -0.51
PDCD6-210	ENST00000513582	ZFP69B	Q9UJL9	534 aa		11.9	□□□□□ -0.51
PDCD6-210	ENST00000513582	SCN11A	Q9UI33	1791 aa		11.89	□□□□□ -0.51
PDCD6-210	ENST00000513582	EIF4B	P23588	611 aa	Known RBP	11.89	□□□□□ -0.51
PDCD6-210	ENST00000513582	UBXN2A	P68543	259 aa		11.89	□□□□□ -0.51
PDCD6-210	ENST00000513582	MCUR1	Q96AQ8	359 aa		11.89	□□□□□ -0.51
PDCD6-210	ENST00000513582	CYTH2	Q99418	400 aa		11.89	□□□□□ -0.51
PDCD6-210	ENST00000513582	POP1	Q99575	1024 aa	Known RBP	11.89	□□□□□ -0.51
PDCD6-210	ENST00000513582	ADAM33	Q9BZ11	813 aa		11.89	□□□□□ -0.51
PDCD6-210	ENST00000513582	USP40	Q9NVE5	1235 aa		11.89	□□□□□ -0.51
PDCD6-210	ENST00000513582	AIPL1	Q9NZN9	384 aa		11.89	□□□□□ -0.51
PDCD6-210	ENST00000513582	STXBP5L	Q9Y2K9	1186 aa		11.89	□□□□□ -0.51
PDCD6-210	ENST00000513582	PASK	Q96RG2	1323 aa		11.89	□□□□□ -0.51
PDCD6-210	ENST00000513582	RCAN1	P53805	252 aa		11.89	□□□□□ -0.51
PDCD6-210	ENST00000513582	LRRC63	Q05C16	580 aa		11.89	□□□□□ -0.51
PDCD6-210	ENST00000513582	CBX3	Q13185	183 aa		11.89	□□□□□ -0.51
PDCD6-210	ENST00000513582	MAP7	Q14244	749 aa		11.89	□□□□□ -0.51
PDCD6-210	ENST00000513582	PFKFB3	Q16875	520 aa	Predicted RBP	11.89	□□□□□ -0.51
PDCD6-210	ENST00000513582	MFSD14B	Q5SR56	506 aa		11.89	□□□□□ -0.51
PDCD6-210	ENST00000513582	ISLR2	Q6UXK2	745 aa		11.89	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms