RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 ZSWIM5Q9P217 1185 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 DKK3Q9UBP4 350 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 POLLQ9UGP5 575 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 RIMKLBQ9ULI2 386 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 DDX19BQ9UMR2 479 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 MINPP1Q9UNW1 487 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 TRAF3IP3Q9Y228 551 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 SPEF2Q9C093 1822 aa5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 CYP2D7A0A087X1C5 515 aa5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 MCF2LO15068 1137 aa5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 MTSS1O43312 755 aa5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 USO1O60763 962 aaKnown RBP5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 TUBP50607 506 aa5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 DRG2P55039 364 aaKnown RBP5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 CHRNDQ07001 517 aa5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 LBRQ14739 615 aaKnown RBP5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 ANO4Q32M45 955 aa5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 HS1BP3Q53T59 392 aa5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 MCTP1Q6DN14 999 aa5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 C16orf46Q6P387 395 aa5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 PPFIBP1Q86W92 1011 aa5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 SP8Q8IXZ3 490 aa5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 ANKK1Q8NFD2 765 aa5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 ST13P5Q8NFI4 369 aaPredicted RBP5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 EXOC6Q8TAG9 804 aa5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 KIAA1191Q96A73 305 aa5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 DDX23Q9BUQ8 820 aaKnown RBP5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 ACAT2Q9BWD1 397 aa5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 ARFGAP3Q9NP61 516 aa5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 UBN1Q9NPG3 1134 aa5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 GPRC5BQ9NZH0 403 aa5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 CWC15Q9P013 229 aaKnown RBP5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 EXOC6BQ9Y2D4 811 aa5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 RIC1Q4ADV7 1423 aa5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 BRCA1P38398 1863 aaKnown RBP5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 UBXN8O00124 270 aa5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 CAPN9O14815 690 aa5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 MAFKO60675 156 aa5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 PQBP1O60828 265 aaKnown RBP5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 ADAMTS4O75173 837 aa5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 SURF6O75683 361 aaKnown RBP5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 RAD17O75943 681 aa5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 CAPNS1P04632 268 aa5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 CYP11B2P19099 503 aa5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 MCM4P33991 863 aa5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 GRIK1P39086 918 aa5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 LIFRP42702 1097 aa5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 PSMC4P43686 418 aa5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 CRKP46108 304 aa5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 DNM1Q05193 864 aaKnown RBP5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 IKQ13123 557 aaPredicted RBP5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 PCBP1Q15365 356 aaKnown RBP eCLIP5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 TAF5Q15542 800 aa5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 ATP2B3Q16720 1220 aa5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 GEN1Q17RS7 908 aa5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 GPR139Q6DWJ6 353 aa5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 C6orf15Q6UXA7 325 aaPredicted RBP5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 INTS8Q75QN2 995 aaKnown RBP5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 TXNRD3Q86VQ6 643 aa5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 NLRP8Q86W28 1048 aa5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 TMTC1Q8IUR5 882 aa5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 RBM12BQ8IXT5 1001 aaKnown RBP5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 GJD3Q8N144 294 aa5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 ANKRD35Q8N283 1001 aa5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 C2orf69Q8N8R5 385 aa5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 GOT1L1Q8NHS2 421 aaPredicted RBP5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 SLC30A5Q8TAD4 765 aa5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 FBXO30Q8TB52 745 aa5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 TBC1D16Q8TBP0 767 aa5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 NOC3LQ8WTT2 800 aaKnown RBP5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 HDAC7Q8WUI4 952 aa5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 ASB12Q8WXK4 309 aa5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 USP13Q92995 863 aaPredicted RBP5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 RUSC1Q9BVN2 902 aa5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 TXLNGYQ9BZA5 131 aa5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 ZC3H12CQ9C0D7 883 aaKnown RBP5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 TRIT1Q9H3H1 467 aaKnown RBP5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 OLA1Q9NTK5 396 aaKnown RBP5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 GGA1Q9UJY5 639 aa5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 ZNF711Q9Y462 761 aa5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 MAP4K5Q9Y4K4 846 aa5.47□□□□□ -1.53
TRAPPC11-208ENST00000511955 DLEC1Q9Y238 1755 aa5.46□□□□□ -1.53
TRAPPC11-208ENST00000511955 A6NLC8 198 aa5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 BIN1O00499 593 aa5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 SIN3BO75182 1162 aa5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 POLR3DP05423 398 aaPredicted RBP5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 ZSCAN22P10073 491 aaPredicted RBP5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 TFEBP19484 476 aa5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 EPS15P42566 896 aa5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 CCNA1P78396 465 aa5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 GTF2H3Q13889 308 aa5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 KRT32Q14532 448 aa5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 C5orf22Q49AR2 442 aa5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 FAM26DQ5JW98 314 aa5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 ZNF362Q5T0B9 420 aaPredicted RBP5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 MRM1Q6IN84 353 aaKnown RBP5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 CEP85Q6P2H3 762 aa5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 GALNT6Q8NCL4 622 aa5.46□□□□□ -1.54
TRAPPC11-208ENST00000511955 MOSPD2Q8NHP6 518 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms