RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 ARL5CA6NH57 179 aa14.68□□□□□ -0.06
RNF4-215ENST00000511843 HIDE1A8MVS5 230 aa14.68□□□□□ -0.06
RNF4-215ENST00000511843 TNFRSF10AO00220 468 aa14.68□□□□□ -0.06
RNF4-215ENST00000511843 GALTP07902 379 aa14.68□□□□□ -0.06
RNF4-215ENST00000511843 PDCP20941 246 aa14.68□□□□□ -0.06
RNF4-215ENST00000511843 CA8P35219 290 aa14.68□□□□□ -0.06
RNF4-215ENST00000511843 NDUFV1P49821 464 aa14.68□□□□□ -0.06
RNF4-215ENST00000511843 CEBPZQ03701 1054 aaKnown RBP14.68□□□□□ -0.06
RNF4-215ENST00000511843 NCBP1Q09161 790 aaKnown RBP14.68□□□□□ -0.06
RNF4-215ENST00000511843 MAPK7Q13164 816 aa14.68□□□□□ -0.06
RNF4-215ENST00000511843 PCBP1Q15365 356 aaKnown RBP eCLIP14.68□□□□□ -0.06
RNF4-215ENST00000511843 TMEM132AQ24JP5 1023 aa14.68□□□□□ -0.06
RNF4-215ENST00000511843 EEF1DP3Q658K8 133 aa14.68□□□□□ -0.06
RNF4-215ENST00000511843 ARL6IP4Q66PJ3 421 aaKnown RBP14.68□□□□□ -0.06
RNF4-215ENST00000511843 RINT1Q6NUQ1 792 aa14.68□□□□□ -0.06
RNF4-215ENST00000511843 SLC27A1Q6PCB7 646 aa14.68□□□□□ -0.06
RNF4-215ENST00000511843 PPP4R3CPQ6ZMV5 832 aa14.68□□□□□ -0.06
RNF4-215ENST00000511843 TMC7Q7Z402 723 aa14.68□□□□□ -0.06
RNF4-215ENST00000511843 CABP7Q86V35 215 aa14.68□□□□□ -0.06
RNF4-215ENST00000511843 VN1R2Q8NFZ6 395 aa14.68□□□□□ -0.06
RNF4-215ENST00000511843 AUTS2Q8WXX7 1259 aa14.68□□□□□ -0.06
RNF4-215ENST00000511843 CCDC51Q96ER9 411 aa14.68□□□□□ -0.06
RNF4-215ENST00000511843 IFT74Q96LB3 600 aa14.68□□□□□ -0.06
RNF4-215ENST00000511843 TRIM6Q9C030 488 aaPredicted RBP14.68□□□□□ -0.06
RNF4-215ENST00000511843 FZD8Q9H461 694 aa14.68□□□□□ -0.06
RNF4-215ENST00000511843 PDZD7Q9H5P4 517 aa14.68□□□□□ -0.06
RNF4-215ENST00000511843 TLE6Q9H808 572 aa14.68□□□□□ -0.06
RNF4-215ENST00000511843 PRMT7Q9NVM4 692 aaPredicted RBP14.68□□□□□ -0.06
RNF4-215ENST00000511843 PUF60Q9UHX1 559 aaKnown RBP14.68□□□□□ -0.06
RNF4-215ENST00000511843 BARX2Q9UMQ3 279 aaPredicted RBP14.68□□□□□ -0.06
RNF4-215ENST00000511843 MUC3AQ02505 3323 aa14.68□□□□□ -0.06
RNF4-215ENST00000511843 PLXNA3P51805 1871 aa14.67□□□□□ -0.06
RNF4-215ENST00000511843 CITO14578 2027 aa14.67□□□□□ -0.06
RNF4-215ENST00000511843 NPHP3-ACAD11A0A0J9YXS1 232 aa14.67□□□□□ -0.06
RNF4-215ENST00000511843 A0A1B0GUA9 196 aa14.67□□□□□ -0.06
RNF4-215ENST00000511843 CCDC169A6NNP5 214 aa14.67□□□□□ -0.06
RNF4-215ENST00000511843 SFI1A8K8P3 1242 aa14.67□□□□□ -0.06
RNF4-215ENST00000511843 SCNN1GP51170 649 aa14.67□□□□□ -0.06
RNF4-215ENST00000511843 PEX3P56589 373 aa14.67□□□□□ -0.06
RNF4-215ENST00000511843 CACNB1Q02641 598 aaPredicted RBP14.67□□□□□ -0.06
RNF4-215ENST00000511843 KRT17Q04695 432 aa14.67□□□□□ -0.06
RNF4-215ENST00000511843 PRPF4BQ13523 1007 aaKnown RBP14.67□□□□□ -0.06
RNF4-215ENST00000511843 PPP2R5AQ15172 486 aa14.67□□□□□ -0.06
RNF4-215ENST00000511843 MAPK6Q16659 721 aa14.67□□□□□ -0.06
RNF4-215ENST00000511843 TMEM119Q4V9L6 283 aa14.67□□□□□ -0.06
RNF4-215ENST00000511843 HYIQ5T013 277 aa14.67□□□□□ -0.06
RNF4-215ENST00000511843 LLGL2Q6P1M3 1020 aa14.67□□□□□ -0.06
RNF4-215ENST00000511843 C1orf186Q6ZWK4 172 aa14.67□□□□□ -0.06
RNF4-215ENST00000511843 EFHBQ8N7U6 833 aa14.67□□□□□ -0.06
RNF4-215ENST00000511843 KIFAP3Q92845 792 aa14.67□□□□□ -0.06
RNF4-215ENST00000511843 PPP2R3CQ969Q6 453 aa14.67□□□□□ -0.06
RNF4-215ENST00000511843 INTS4Q96HW7 963 aaKnown RBP14.67□□□□□ -0.06
RNF4-215ENST00000511843 CDK5RAP3Q96JB5 506 aa14.67□□□□□ -0.06
RNF4-215ENST00000511843 VN1R3Q9BXE9 311 aa14.67□□□□□ -0.06
RNF4-215ENST00000511843 C2orf40Q9H1Z8 148 aa14.67□□□□□ -0.06
RNF4-215ENST00000511843 CXCL16Q9H2A7 254 aa14.67□□□□□ -0.06
RNF4-215ENST00000511843 CD320Q9NPF0 282 aa14.67□□□□□ -0.06
RNF4-215ENST00000511843 CACNG4Q9UBN1 327 aa14.67□□□□□ -0.06
RNF4-215ENST00000511843 MTMR6Q9Y217 621 aa14.67□□□□□ -0.06
RNF4-215ENST00000511843 LZTS1Q9Y250 596 aa14.67□□□□□ -0.06
RNF4-215ENST00000511843 PDCD11Q14690 1871 aaKnown RBP14.66□□□□□ -0.06
RNF4-215ENST00000511843 GRXCR2A6NFK2 248 aa14.66□□□□□ -0.06
RNF4-215ENST00000511843 F8W810 466 aa14.66□□□□□ -0.06
RNF4-215ENST00000511843 MARCKSP29966 332 aaPredicted RBP14.66□□□□□ -0.06
RNF4-215ENST00000511843 NPTX2P47972 431 aa14.66□□□□□ -0.06
RNF4-215ENST00000511843 DHX8Q14562 1220 aaKnown RBP14.66□□□□□ -0.06
RNF4-215ENST00000511843 PTPAQ15257 358 aa14.66□□□□□ -0.06
RNF4-215ENST00000511843 DUSP6Q16828 381 aa14.66□□□□□ -0.06
RNF4-215ENST00000511843 FAM187BQ17R55 369 aa14.66□□□□□ -0.06
RNF4-215ENST00000511843 SPECC1Q5M775 1068 aa14.66□□□□□ -0.06
RNF4-215ENST00000511843 NT5DC1Q5TFE4 455 aa14.66□□□□□ -0.06
RNF4-215ENST00000511843 FOXD4L5Q5VV16 416 aaPredicted RBP14.66□□□□□ -0.06
RNF4-215ENST00000511843 USP49Q70CQ1 688 aa14.66□□□□□ -0.06
RNF4-215ENST00000511843 VPS52Q8N1B4 723 aa14.66□□□□□ -0.06
RNF4-215ENST00000511843 CNNM3Q8NE01 707 aa14.66□□□□□ -0.06
RNF4-215ENST00000511843 FOXD4L4Q8WXT5 416 aaPredicted RBP14.66□□□□□ -0.06
RNF4-215ENST00000511843 RABGGTAQ92696 567 aa14.66□□□□□ -0.06
RNF4-215ENST00000511843 TMEM169Q96HH4 297 aa14.66□□□□□ -0.06
RNF4-215ENST00000511843 IGSF21Q96ID5 467 aa14.66□□□□□ -0.06
RNF4-215ENST00000511843 PRIMPOLQ96LW4 560 aa14.66□□□□□ -0.06
RNF4-215ENST00000511843 CLEC1BQ9P126 229 aa14.66□□□□□ -0.06
RNF4-215ENST00000511843 PARP2Q9UGN5 583 aa14.66□□□□□ -0.06
RNF4-215ENST00000511843 PRG3Q9Y2Y8 225 aaPredicted RBP14.66□□□□□ -0.06
RNF4-215ENST00000511843 NCOR1O75376 2440 aa14.66□□□□□ -0.06
RNF4-215ENST00000511843 ACKR2O00590 384 aa14.65□□□□□ -0.06
RNF4-215ENST00000511843 NRP1O14786 923 aa14.65□□□□□ -0.06
RNF4-215ENST00000511843 N4BP3O15049 544 aa14.65□□□□□ -0.06
RNF4-215ENST00000511843 NCK2O43639 380 aa14.65□□□□□ -0.06
RNF4-215ENST00000511843 PLA2G4BP0C869 781 aa14.65□□□□□ -0.06
RNF4-215ENST00000511843 PLCG1P19174 1290 aa14.65□□□□□ -0.06
RNF4-215ENST00000511843 OR1G1P47890 313 aa14.65□□□□□ -0.06
RNF4-215ENST00000511843 SLC12A3P55017 1021 aa14.65□□□□□ -0.06
RNF4-215ENST00000511843 KARSQ15046 597 aaKnown RBP14.65□□□□□ -0.06
RNF4-215ENST00000511843 TAS1R3Q7RTX0 852 aa14.65□□□□□ -0.06
RNF4-215ENST00000511843 SPRYD3Q8NCJ5 442 aa14.65□□□□□ -0.06
RNF4-215ENST00000511843 GSTCDQ8NEC7 633 aa14.65□□□□□ -0.06
RNF4-215ENST00000511843 KHSRPQ92945 711 aaKnown RBP eCLIP14.65□□□□□ -0.06
RNF4-215ENST00000511843 SNX21Q969T3 373 aa14.65□□□□□ -0.06
RNF4-215ENST00000511843 FAM193BQ96PV7 902 aaPredicted RBP14.65□□□□□ -0.06
RNF4-215ENST00000511843 NT5C3AQ9H0P0 336 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms