RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 ERO1AQ96HE7 468 aa16.55■□□□□ 0.24
SCLT1-209ENST00000511426 AGPAT5Q9NUQ2 364 aa16.55■□□□□ 0.24
SCLT1-209ENST00000511426 GCNT4Q9P109 453 aa16.55■□□□□ 0.24
SCLT1-209ENST00000511426 SRRDQ9UH36 339 aa16.55■□□□□ 0.24
SCLT1-209ENST00000511426 AGO2Q9UKV8 859 aaKnown RBP16.55■□□□□ 0.24
SCLT1-209ENST00000511426 GABRQQ9UN88 632 aa16.55■□□□□ 0.24
SCLT1-209ENST00000511426 TISP43B9A030 160 aa16.54■□□□□ 0.24
SCLT1-209ENST00000511426 CLDN3O15551 220 aa16.54■□□□□ 0.24
SCLT1-209ENST00000511426 TBC1D8O95759 1140 aa16.54■□□□□ 0.24
SCLT1-209ENST00000511426 CCDC175P0C221 793 aa16.54■□□□□ 0.24
SCLT1-209ENST00000511426 RARBP10826 455 aa16.54■□□□□ 0.24
SCLT1-209ENST00000511426 KLK7P49862 253 aa16.54■□□□□ 0.24
SCLT1-209ENST00000511426 CLCN3P51790 818 aa16.54■□□□□ 0.24
SCLT1-209ENST00000511426 CLDN10P78369 228 aa16.54■□□□□ 0.24
SCLT1-209ENST00000511426 MFSD10Q14728 455 aa16.54■□□□□ 0.24
SCLT1-209ENST00000511426 KYAT1Q16773 422 aa16.54■□□□□ 0.24
SCLT1-209ENST00000511426 KIAA0753Q2KHM9 967 aa16.54■□□□□ 0.24
SCLT1-209ENST00000511426 PARD3BQ8TEW8 1205 aa16.54■□□□□ 0.24
SCLT1-209ENST00000511426 TRAPPC12Q8WVT3 735 aa16.54■□□□□ 0.24
SCLT1-209ENST00000511426 KAT2BQ92831 832 aa16.54■□□□□ 0.24
SCLT1-209ENST00000511426 ARHGAP39Q9C0H5 1083 aa16.54■□□□□ 0.24
SCLT1-209ENST00000511426 GANQ9H2C0 597 aa16.54■□□□□ 0.24
SCLT1-209ENST00000511426 DOCK3Q8IZD9 2030 aa16.54■□□□□ 0.24
SCLT1-209ENST00000511426 ZSWIM8A7E2V4 1837 aa16.54■□□□□ 0.24
SCLT1-209ENST00000511426 NOL4O94818 638 aa16.53■□□□□ 0.24
SCLT1-209ENST00000511426 SRGAP2CP0DJJ0 459 aa16.53■□□□□ 0.24
SCLT1-209ENST00000511426 UCHL3P15374 230 aa16.53■□□□□ 0.24
SCLT1-209ENST00000511426 CYLC1P35663 651 aaPredicted RBP16.53■□□□□ 0.24
SCLT1-209ENST00000511426 PSEN2P49810 448 aa16.53■□□□□ 0.24
SCLT1-209ENST00000511426 AP3M2P53677 418 aa16.53■□□□□ 0.24
SCLT1-209ENST00000511426 IGBP1P78318 339 aa16.53■□□□□ 0.24
SCLT1-209ENST00000511426 MCL1Q07820 350 aa16.53■□□□□ 0.24
SCLT1-209ENST00000511426 CYP24A1Q07973 514 aa16.53■□□□□ 0.24
SCLT1-209ENST00000511426 GOLGA8FQ08AF8 430 aa16.53■□□□□ 0.24
SCLT1-209ENST00000511426 GOLGA8DPQ0D2H9 430 aa16.53■□□□□ 0.24
SCLT1-209ENST00000511426 PSMD6Q15008 389 aa16.53■□□□□ 0.24
SCLT1-209ENST00000511426 SURF1Q15526 300 aa16.53■□□□□ 0.24
SCLT1-209ENST00000511426 KLHDC7AQ5VTJ3 777 aa16.53■□□□□ 0.24
SCLT1-209ENST00000511426 NFRKBQ6P4R8 1299 aa16.53■□□□□ 0.24
SCLT1-209ENST00000511426 PDXDC1Q6P996 788 aa16.53■□□□□ 0.24
SCLT1-209ENST00000511426 TSHZ1Q6ZSZ6 1077 aa16.53■□□□□ 0.24
SCLT1-209ENST00000511426 SRGAP1Q7Z6B7 1085 aa16.53■□□□□ 0.24
SCLT1-209ENST00000511426 CBWD2Q8IUF1 395 aa16.53■□□□□ 0.24
SCLT1-209ENST00000511426 FAM81BQ96LP2 452 aa16.53■□□□□ 0.24
SCLT1-209ENST00000511426 NLRP4Q96MN2 994 aa16.53■□□□□ 0.24
SCLT1-209ENST00000511426 ACO2Q99798 780 aaKnown RBP16.53■□□□□ 0.24
SCLT1-209ENST00000511426 TARS2Q9BW92 718 aaKnown RBP16.53■□□□□ 0.24
SCLT1-209ENST00000511426 TMEM8AQ9HCN3 771 aa16.53■□□□□ 0.24
SCLT1-209ENST00000511426 AKT3Q9Y243 479 aa16.53■□□□□ 0.24
SCLT1-209ENST00000511426 COQ4Q9Y3A0 265 aa16.53■□□□□ 0.24
SCLT1-209ENST00000511426 SSU72P8A0A1W2PR75 194 aa16.53■□□□□ 0.24
SCLT1-209ENST00000511426 RNF225M0QZC1 329 aaPredicted RBP16.53■□□□□ 0.24
SCLT1-209ENST00000511426 IPO7O95373 1038 aaKnown RBP16.53■□□□□ 0.24
SCLT1-209ENST00000511426 HMGCRP04035 888 aa16.53■□□□□ 0.24
SCLT1-209ENST00000511426 SMIM10L2AP0DMW4 78 aa16.53■□□□□ 0.24
SCLT1-209ENST00000511426 SMIM10L2BP0DMW5 78 aa16.53■□□□□ 0.24
SCLT1-209ENST00000511426 PROZP22891 400 aa16.53■□□□□ 0.24
SCLT1-209ENST00000511426 ANXA13P27216 316 aa16.53■□□□□ 0.24
SCLT1-209ENST00000511426 CST5P28325 142 aaPredicted RBP16.53■□□□□ 0.24
SCLT1-209ENST00000511426 HOXC8P31273 242 aa16.53■□□□□ 0.24
SCLT1-209ENST00000511426 MXI1P50539 228 aa16.53■□□□□ 0.24
SCLT1-209ENST00000511426 ADAM17P78536 824 aa16.53■□□□□ 0.24
SCLT1-209ENST00000511426 PURAQ00577 322 aaKnown RBP16.53■□□□□ 0.24
SCLT1-209ENST00000511426 MBTD1Q05BQ5 628 aa16.53■□□□□ 0.24
SCLT1-209ENST00000511426 MARCH8Q5T0T0 291 aa16.53■□□□□ 0.24
SCLT1-209ENST00000511426 KRT39Q6A163 491 aa16.53■□□□□ 0.24
SCLT1-209ENST00000511426 TRIM65Q6PJ69 517 aa16.53■□□□□ 0.24
SCLT1-209ENST00000511426 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.53■□□□□ 0.24
SCLT1-209ENST00000511426 CCDC155Q8N6L0 562 aa16.53■□□□□ 0.24
SCLT1-209ENST00000511426 RDH13Q8NBN7 331 aa16.53■□□□□ 0.24
SCLT1-209ENST00000511426 LMBR1Q8WVP7 490 aa16.53■□□□□ 0.24
SCLT1-209ENST00000511426 MTG1Q9BT17 334 aaPredicted RBP16.53■□□□□ 0.24
SCLT1-209ENST00000511426 MSTO1Q9BUK6 570 aa16.53■□□□□ 0.24
SCLT1-209ENST00000511426 AIPL1Q9NZN9 384 aa16.53■□□□□ 0.24
SCLT1-209ENST00000511426 TNFSF13BQ9Y275 285 aa16.53■□□□□ 0.24
SCLT1-209ENST00000511426 BZW2Q9Y6E2 419 aaKnown RBP16.53■□□□□ 0.24
SCLT1-209ENST00000511426 GPR25O00155 361 aa16.52■□□□□ 0.23
SCLT1-209ENST00000511426 TRPA1O75762 1119 aa16.52■□□□□ 0.23
SCLT1-209ENST00000511426 ECM2O94769 699 aaPredicted RBP16.52■□□□□ 0.23
SCLT1-209ENST00000511426 ADRB2P07550 413 aa16.52■□□□□ 0.23
SCLT1-209ENST00000511426 CCDC172P0C7W6 258 aa16.52■□□□□ 0.23
SCLT1-209ENST00000511426 VEGFBP49765 207 aa16.52■□□□□ 0.23
SCLT1-209ENST00000511426 POLR2FP61218 127 aaKnown RBP16.52■□□□□ 0.23
SCLT1-209ENST00000511426 PRPF4BQ13523 1007 aaKnown RBP16.52■□□□□ 0.23
SCLT1-209ENST00000511426 WDR59Q6PJI9 974 aa16.52■□□□□ 0.23
SCLT1-209ENST00000511426 MPZL3Q6UWV2 235 aa16.52■□□□□ 0.23
SCLT1-209ENST00000511426 TRPV1Q8NER1 839 aa16.52■□□□□ 0.23
SCLT1-209ENST00000511426 CRACR2AQ9BSW2 395 aa16.52■□□□□ 0.23
SCLT1-209ENST00000511426 INO80BQ9C086 356 aaPredicted RBP16.52■□□□□ 0.23
SCLT1-209ENST00000511426 IFT122Q9HBG6 1241 aa16.52■□□□□ 0.23
SCLT1-209ENST00000511426 APEX2Q9UBZ4 518 aa16.52■□□□□ 0.23
SCLT1-209ENST00000511426 CNTNAP2Q9UHC6 1331 aa16.52■□□□□ 0.23
SCLT1-209ENST00000511426 SOWAHDA6NJG2 315 aa16.51■□□□□ 0.23
SCLT1-209ENST00000511426 LRRC53A6NM62 1247 aa16.51■□□□□ 0.23
SCLT1-209ENST00000511426 INO80B-WBP1J3KQ70 363 aa16.51■□□□□ 0.23
SCLT1-209ENST00000511426 EPHB6O15197 1021 aa16.51■□□□□ 0.23
SCLT1-209ENST00000511426 OGTO15294 1046 aa16.51■□□□□ 0.23
SCLT1-209ENST00000511426 ZC3H11AO75152 810 aaKnown RBP eCLIP16.51■□□□□ 0.23
SCLT1-209ENST00000511426 MYL3P08590 195 aa16.51■□□□□ 0.23
SCLT1-209ENST00000511426 TRIM49P0CI25 452 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms