RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 MIOSQ9NXC5 875 aa12.83□□□□□ -0.36
SH3RF1-205ENST00000511421 CLDND1Q9NY35 253 aa12.83□□□□□ -0.36
SH3RF1-205ENST00000511421 DNAJB4Q9UDY4 337 aa12.83□□□□□ -0.36
SH3RF1-205ENST00000511421 PUF60Q9UHX1 559 aaKnown RBP12.83□□□□□ -0.36
SH3RF1-205ENST00000511421 USP20Q9Y2K6 914 aa12.83□□□□□ -0.36
SH3RF1-205ENST00000511421 LINC01565O15544 149 aa12.82□□□□□ -0.36
SH3RF1-205ENST00000511421 NPTXRO95502 500 aa12.82□□□□□ -0.36
SH3RF1-205ENST00000511421 PLA2G4BP0C869 781 aa12.82□□□□□ -0.36
SH3RF1-205ENST00000511421 NPTX2P47972 431 aa12.82□□□□□ -0.36
SH3RF1-205ENST00000511421 EFNA5P52803 228 aa12.82□□□□□ -0.36
SH3RF1-205ENST00000511421 PEX3P56589 373 aa12.82□□□□□ -0.36
SH3RF1-205ENST00000511421 KRT17Q04695 432 aa12.82□□□□□ -0.36
SH3RF1-205ENST00000511421 RNASELQ05823 741 aaKnown RBP12.82□□□□□ -0.36
SH3RF1-205ENST00000511421 DLX2Q07687 328 aaPredicted RBP12.82□□□□□ -0.36
SH3RF1-205ENST00000511421 ADAM15Q13444 863 aa12.82□□□□□ -0.36
SH3RF1-205ENST00000511421 PDE12Q6L8Q7 609 aaKnown RBP12.82□□□□□ -0.36
SH3RF1-205ENST00000511421 HSCBQ8IWL3 235 aa12.82□□□□□ -0.36
SH3RF1-205ENST00000511421 MICAL1Q8TDZ2 1067 aa12.82□□□□□ -0.36
SH3RF1-205ENST00000511421 PPP2R3CQ969Q6 453 aa12.82□□□□□ -0.36
SH3RF1-205ENST00000511421 CDK5RAP3Q96JB5 506 aa12.82□□□□□ -0.36
SH3RF1-205ENST00000511421 GAD1Q99259 594 aa12.82□□□□□ -0.36
SH3RF1-205ENST00000511421 TRIM6Q9C030 488 aaPredicted RBP12.82□□□□□ -0.36
SH3RF1-205ENST00000511421 PDZD7Q9H5P4 517 aa12.82□□□□□ -0.36
SH3RF1-205ENST00000511421 IGFLR1Q9H665 355 aa12.82□□□□□ -0.36
SH3RF1-205ENST00000511421 KANSL3Q9P2N6 904 aa12.82□□□□□ -0.36
SH3RF1-205ENST00000511421 GIT1Q9Y2X7 761 aa12.82□□□□□ -0.36
SH3RF1-205ENST00000511421 ARL5CA6NH57 179 aa12.81□□□□□ -0.36
SH3RF1-205ENST00000511421 H3BQ06 376 aaPredicted RBP12.81□□□□□ -0.36
SH3RF1-205ENST00000511421 N4BP3O15049 544 aa12.81□□□□□ -0.36
SH3RF1-205ENST00000511421 POMCP01189 267 aa12.81□□□□□ -0.36
SH3RF1-205ENST00000511421 SSBP05455 408 aaKnown RBP eCLIP12.81□□□□□ -0.36
SH3RF1-205ENST00000511421 MARCKSP29966 332 aaPredicted RBP12.81□□□□□ -0.36
SH3RF1-205ENST00000511421 UBA7P41226 1012 aa12.81□□□□□ -0.36
SH3RF1-205ENST00000511421 NRIP1P48552 1158 aa12.81□□□□□ -0.36
SH3RF1-205ENST00000511421 SLC11A1P49279 550 aa12.81□□□□□ -0.36
SH3RF1-205ENST00000511421 PRPF4BQ13523 1007 aaKnown RBP12.81□□□□□ -0.36
SH3RF1-205ENST00000511421 NT5DC1Q5TFE4 455 aa12.81□□□□□ -0.36
SH3RF1-205ENST00000511421 EEF1DP3Q658K8 133 aa12.81□□□□□ -0.36
SH3RF1-205ENST00000511421 TAS1R3Q7RTX0 852 aa12.81□□□□□ -0.36
SH3RF1-205ENST00000511421 RBM23Q86U06 439 aaKnown RBP12.81□□□□□ -0.36
SH3RF1-205ENST00000511421 EFHBQ8N7U6 833 aa12.81□□□□□ -0.36
SH3RF1-205ENST00000511421 GSTCDQ8NEC7 633 aa12.81□□□□□ -0.36
SH3RF1-205ENST00000511421 BCL7CQ8WUZ0 217 aaPredicted RBP12.81□□□□□ -0.36
SH3RF1-205ENST00000511421 IGSF21Q96ID5 467 aa12.81□□□□□ -0.36
SH3RF1-205ENST00000511421 DRC1Q96MC2 740 aa12.81□□□□□ -0.36
SH3RF1-205ENST00000511421 ZFP42Q96MM3 310 aa12.81□□□□□ -0.36
SH3RF1-205ENST00000511421 NECAB3Q96P71 396 aaPredicted RBP12.81□□□□□ -0.36
SH3RF1-205ENST00000511421 UHRF1Q96T88 793 aaPredicted RBP12.81□□□□□ -0.36
SH3RF1-205ENST00000511421 TCF25Q9BQ70 676 aa12.81□□□□□ -0.36
SH3RF1-205ENST00000511421 TIPINQ9BVW5 301 aa12.81□□□□□ -0.36
SH3RF1-205ENST00000511421 APOL6Q9BWW8 343 aa12.81□□□□□ -0.36
SH3RF1-205ENST00000511421 GBP3Q9H0R5 595 aa12.81□□□□□ -0.36
SH3RF1-205ENST00000511421 ZSCAN16Q9H4T2 348 aaPredicted RBP12.81□□□□□ -0.36
SH3RF1-205ENST00000511421 C17orf75Q9HAS0 396 aa12.81□□□□□ -0.36
SH3RF1-205ENST00000511421 BLOC1S4Q9NUP1 217 aa12.81□□□□□ -0.36
SH3RF1-205ENST00000511421 ARHGAP28Q9P2N2 729 aa12.81□□□□□ -0.36
SH3RF1-205ENST00000511421 TCF20Q9UGU0 1960 aaKnown RBP12.81□□□□□ -0.36
SH3RF1-205ENST00000511421 FBXO2Q9UK22 296 aaPredicted RBP12.81□□□□□ -0.36
SH3RF1-205ENST00000511421 MORC2Q9Y6X9 1032 aaPredicted RBP12.81□□□□□ -0.36
SH3RF1-205ENST00000511421 CARNS1A5YM72 827 aa12.8□□□□□ -0.36
SH3RF1-205ENST00000511421 CCDC169A6NNP5 214 aa12.8□□□□□ -0.36
SH3RF1-205ENST00000511421 SFI1A8K8P3 1242 aa12.8□□□□□ -0.36
SH3RF1-205ENST00000511421 HIDE1A8MVS5 230 aa12.8□□□□□ -0.36
SH3RF1-205ENST00000511421 TBX10O75333 385 aa12.8□□□□□ -0.36
SH3RF1-205ENST00000511421 LIG1P18858 919 aa12.8□□□□□ -0.36
SH3RF1-205ENST00000511421 AKAP5P24588 427 aa12.8□□□□□ -0.36
SH3RF1-205ENST00000511421 MLH1P40692 756 aa12.8□□□□□ -0.36
SH3RF1-205ENST00000511421 DMP1Q13316 513 aaPredicted RBP12.8□□□□□ -0.36
SH3RF1-205ENST00000511421 KARSQ15046 597 aaKnown RBP12.8□□□□□ -0.36
SH3RF1-205ENST00000511421 ARSHQ5FYA8 562 aa12.8□□□□□ -0.36
SH3RF1-205ENST00000511421 PLPP4Q5VZY2 271 aa12.8□□□□□ -0.36
SH3RF1-205ENST00000511421 EP400NLQ6ZTU2 488 aa12.8□□□□□ -0.36
SH3RF1-205ENST00000511421 USP49Q70CQ1 688 aa12.8□□□□□ -0.36
SH3RF1-205ENST00000511421 HACE1Q8IYU2 909 aa12.8□□□□□ -0.36
SH3RF1-205ENST00000511421 CALML4Q96GE6 196 aa12.8□□□□□ -0.36
SH3RF1-205ENST00000511421 TMEM169Q96HH4 297 aa12.8□□□□□ -0.36
SH3RF1-205ENST00000511421 USP28Q96RU2 1077 aa12.8□□□□□ -0.36
SH3RF1-205ENST00000511421 TMEM175Q9BSA9 504 aa12.8□□□□□ -0.36
SH3RF1-205ENST00000511421 NTPCRQ9BSD7 190 aaKnown RBP12.8□□□□□ -0.36
SH3RF1-205ENST00000511421 CCSER1Q9C0I3 900 aa12.8□□□□□ -0.36
SH3RF1-205ENST00000511421 TLE6Q9H808 572 aa12.8□□□□□ -0.36
SH3RF1-205ENST00000511421 NGRNQ9NPE2 291 aaKnown RBP12.8□□□□□ -0.36
SH3RF1-205ENST00000511421 KCND2Q9NZV8 630 aa12.8□□□□□ -0.36
SH3RF1-205ENST00000511421 SRPRBQ9Y5M8 271 aaKnown RBP12.8□□□□□ -0.36
SH3RF1-205ENST00000511421 GRXCR2A6NFK2 248 aa12.8□□□□□ -0.36
SH3RF1-205ENST00000511421 K7ERI5 159 aa12.8□□□□□ -0.36
SH3RF1-205ENST00000511421 PER2O15055 1255 aa12.8□□□□□ -0.36
SH3RF1-205ENST00000511421 GLP2RO95838 553 aa12.8□□□□□ -0.36
SH3RF1-205ENST00000511421 PLCG1P19174 1290 aa12.8□□□□□ -0.36
SH3RF1-205ENST00000511421 SCNN1GP51170 649 aa12.8□□□□□ -0.36
SH3RF1-205ENST00000511421 CEBPZQ03701 1054 aaKnown RBP12.8□□□□□ -0.36
SH3RF1-205ENST00000511421 DSC1Q08554 894 aa12.8□□□□□ -0.36
SH3RF1-205ENST00000511421 RAD51AP2Q09MP3 1159 aa12.8□□□□□ -0.36
SH3RF1-205ENST00000511421 DUSP6Q16828 381 aa12.8□□□□□ -0.36
SH3RF1-205ENST00000511421 SPECC1Q5M775 1068 aa12.8□□□□□ -0.36
SH3RF1-205ENST00000511421 DDX53Q86TM3 631 aaKnown RBP12.8□□□□□ -0.36
SH3RF1-205ENST00000511421 COLGALT2Q8IYK4 626 aa12.8□□□□□ -0.36
SH3RF1-205ENST00000511421 SPIRE2Q8WWL2 714 aa12.8□□□□□ -0.36
SH3RF1-205ENST00000511421 EPSTI1Q96J88 318 aa12.8□□□□□ -0.36
SH3RF1-205ENST00000511421 CLIC6Q96NY7 704 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms