RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 ELF1P32519 619 aa11.24□□□□□ -0.61
NEK1-206ENST00000510533 KCNJ6P48051 423 aa11.24□□□□□ -0.61
NEK1-206ENST00000510533 IMPG1Q17R60 797 aa11.24□□□□□ -0.61
NEK1-206ENST00000510533 ITPRIPL1Q6GPH6 555 aa11.24□□□□□ -0.61
NEK1-206ENST00000510533 SPATA21Q7Z572 469 aa11.24□□□□□ -0.61
NEK1-206ENST00000510533 BEST2Q8NFU1 509 aa11.24□□□□□ -0.61
NEK1-206ENST00000510533 AGPAT1Q99943 283 aa11.24□□□□□ -0.61
NEK1-206ENST00000510533 RAVER2Q9HCJ3 691 aaKnown RBP11.24□□□□□ -0.61
NEK1-206ENST00000510533 SENP1Q9P0U3 644 aa11.24□□□□□ -0.61
NEK1-206ENST00000510533 TEKT2Q9UIF3 430 aa11.24□□□□□ -0.61
NEK1-206ENST00000510533 PALLDQ8WX93 1383 aa11.24□□□□□ -0.61
NEK1-206ENST00000510533 EMSYQ7Z589 1322 aa11.23□□□□□ -0.61
NEK1-206ENST00000510533 MDH1P40925 334 aaKnown RBP11.23□□□□□ -0.61
NEK1-206ENST00000510533 NFX1Q12986 1120 aaKnown RBP11.23□□□□□ -0.61
NEK1-206ENST00000510533 NSUN6Q8TEA1 469 aaKnown RBP11.23□□□□□ -0.61
NEK1-206ENST00000510533 RMDN2Q96LZ7 410 aa11.23□□□□□ -0.61
NEK1-206ENST00000510533 WWP1Q9H0M0 922 aa11.23□□□□□ -0.61
NEK1-206ENST00000510533 ZNF302Q9NR11 478 aa11.23□□□□□ -0.61
NEK1-206ENST00000510533 FBXO40Q9UH90 709 aa11.23□□□□□ -0.61
NEK1-206ENST00000510533 FBXO2Q9UK22 296 aaPredicted RBP11.23□□□□□ -0.61
NEK1-206ENST00000510533 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.23□□□□□ -0.61
NEK1-206ENST00000510533 GSG1L2A8MUP6 293 aa11.23□□□□□ -0.61
NEK1-206ENST00000510533 HADHAP40939 763 aa11.23□□□□□ -0.61
NEK1-206ENST00000510533 BYSLQ13895 437 aaKnown RBP11.23□□□□□ -0.61
NEK1-206ENST00000510533 ULK4Q96C45 1275 aa11.23□□□□□ -0.61
NEK1-206ENST00000510533 C2orf40Q9H1Z8 148 aa11.23□□□□□ -0.61
NEK1-206ENST00000510533 A0A1B0GTH6 734 aa11.23□□□□□ -0.61
NEK1-206ENST00000510533 AGTP01019 485 aa11.23□□□□□ -0.61
NEK1-206ENST00000510533 TYK2P29597 1187 aa11.23□□□□□ -0.61
NEK1-206ENST00000510533 TAP1Q03518 808 aa11.23□□□□□ -0.61
NEK1-206ENST00000510533 TTC39CQ8N584 583 aa11.23□□□□□ -0.61
NEK1-206ENST00000510533 GCNAQ96QF7 691 aa11.23□□□□□ -0.61
NEK1-206ENST00000510533 LXNQ9BS40 222 aa11.23□□□□□ -0.61
NEK1-206ENST00000510533 CCDC90BQ9GZT6 254 aa11.23□□□□□ -0.61
NEK1-206ENST00000510533 EPN3Q9H201 632 aa11.23□□□□□ -0.61
NEK1-206ENST00000510533 PARVAQ9NVD7 372 aa11.23□□□□□ -0.61
NEK1-206ENST00000510533 PBRM1Q86U86 1689 aa11.23□□□□□ -0.61
NEK1-206ENST00000510533 ZNF335Q9H4Z2 1342 aaPredicted RBP11.23□□□□□ -0.61
NEK1-206ENST00000510533 SNAP23O00161 211 aa11.23□□□□□ -0.61
NEK1-206ENST00000510533 MEFVO15553 781 aaPredicted RBP11.23□□□□□ -0.61
NEK1-206ENST00000510533 ARSEP51690 589 aa11.23□□□□□ -0.61
NEK1-206ENST00000510533 PSMC5P62195 406 aa11.23□□□□□ -0.61
NEK1-206ENST00000510533 AP1B1Q10567 949 aa11.23□□□□□ -0.61
NEK1-206ENST00000510533 QRICH1Q2TAL8 776 aa11.23□□□□□ -0.61
NEK1-206ENST00000510533 ADGRF4Q8IZF3 695 aa11.23□□□□□ -0.61
NEK1-206ENST00000510533 GPD1LQ8N335 351 aa11.23□□□□□ -0.61
NEK1-206ENST00000510533 ARL2BPQ9Y2Y0 163 aa11.23□□□□□ -0.61
NEK1-206ENST00000510533 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.23□□□□□ -0.61
NEK1-206ENST00000510533 MROH7-TTC4A0A0A0MT08 1334 aa11.23□□□□□ -0.61
NEK1-206ENST00000510533 F5H423 210 aaPredicted RBP11.22□□□□□ -0.61
NEK1-206ENST00000510533 FOXP2O15409 715 aa11.22□□□□□ -0.61
NEK1-206ENST00000510533 MAN1A2O60476 641 aa11.22□□□□□ -0.61
NEK1-206ENST00000510533 USP11P51784 963 aa11.22□□□□□ -0.61
NEK1-206ENST00000510533 CCZ1BP86790 482 aa11.22□□□□□ -0.61
NEK1-206ENST00000510533 CCZ1P86791 482 aaPredicted RBP11.22□□□□□ -0.61
NEK1-206ENST00000510533 RARS2Q5T160 578 aaKnown RBP11.22□□□□□ -0.61
NEK1-206ENST00000510533 E4F1Q66K89 784 aaPredicted RBP11.22□□□□□ -0.61
NEK1-206ENST00000510533 RTKN2Q8IZC4 609 aa11.22□□□□□ -0.61
NEK1-206ENST00000510533 ATL2Q8NHH9 583 aa11.22□□□□□ -0.61
NEK1-206ENST00000510533 EIF2AK1Q9BQI3 630 aaKnown RBP11.22□□□□□ -0.61
NEK1-206ENST00000510533 KCNF1Q9H3M0 494 aa11.22□□□□□ -0.61
NEK1-206ENST00000510533 STX18Q9P2W9 335 aaKnown RBP11.22□□□□□ -0.61
NEK1-206ENST00000510533 GABBR1Q9UBS5 961 aa11.22□□□□□ -0.61
NEK1-206ENST00000510533 CFAP74Q9C0B2 1584 aa11.22□□□□□ -0.61
NEK1-206ENST00000510533 SLC1A1P43005 524 aa11.22□□□□□ -0.61
NEK1-206ENST00000510533 ARHGEF6Q15052 776 aa11.22□□□□□ -0.61
NEK1-206ENST00000510533 MAPRE2Q15555 327 aa11.22□□□□□ -0.61
NEK1-206ENST00000510533 EFHC2Q5JST6 749 aa11.22□□□□□ -0.61
NEK1-206ENST00000510533 SLC10A5Q5PT55 438 aa11.22□□□□□ -0.61
NEK1-206ENST00000510533 CAPRIN2Q6IMN6 1127 aaKnown RBP11.22□□□□□ -0.61
NEK1-206ENST00000510533 MASTLQ96GX5 879 aa11.22□□□□□ -0.61
NEK1-206ENST00000510533 PRMT1Q99873 361 aaKnown RBP11.22□□□□□ -0.61
NEK1-206ENST00000510533 POLR3FQ9H1D9 316 aaPredicted RBP11.22□□□□□ -0.61
NEK1-206ENST00000510533 CD209Q9NNX6 404 aa11.22□□□□□ -0.61
NEK1-206ENST00000510533 ADGRL3Q9HAR2 1447 aa11.22□□□□□ -0.61
NEK1-206ENST00000510533 MYO5CQ9NQX4 1742 aa11.22□□□□□ -0.61
NEK1-206ENST00000510533 TCP11X1B4DZS4 312 aa11.22□□□□□ -0.61
NEK1-206ENST00000510533 PDXKO00764 312 aa11.22□□□□□ -0.61
NEK1-206ENST00000510533 RTN2O75298 545 aa11.22□□□□□ -0.61
NEK1-206ENST00000510533 ESRRBO95718 433 aa11.22□□□□□ -0.61
NEK1-206ENST00000510533 ZFXP17010 805 aaPredicted RBP11.22□□□□□ -0.61
NEK1-206ENST00000510533 KRT33BQ14525 404 aa11.22□□□□□ -0.61
NEK1-206ENST00000510533 HIF1AQ16665 826 aa11.22□□□□□ -0.61
NEK1-206ENST00000510533 FAM102AQ5T9C2 384 aaPredicted RBP11.22□□□□□ -0.61
NEK1-206ENST00000510533 SYDE1Q6ZW31 735 aaPredicted RBP11.22□□□□□ -0.61
NEK1-206ENST00000510533 HOXC10Q9NYD6 342 aa11.22□□□□□ -0.61
NEK1-206ENST00000510533 PIK3R2O00459 728 aa11.22□□□□□ -0.61
NEK1-206ENST00000510533 ZNF185O15231 689 aa11.22□□□□□ -0.61
NEK1-206ENST00000510533 ORC4O43929 436 aa11.22□□□□□ -0.61
NEK1-206ENST00000510533 CUL3Q13618 768 aa11.22□□□□□ -0.61
NEK1-206ENST00000510533 FLOT2Q14254 428 aa11.22□□□□□ -0.61
NEK1-206ENST00000510533 SNRNP48Q6IEG0 339 aaKnown RBP11.22□□□□□ -0.61
NEK1-206ENST00000510533 SWSAP1Q6NVH7 229 aa11.22□□□□□ -0.61
NEK1-206ENST00000510533 LRIG3Q6UXM1 1119 aa11.22□□□□□ -0.61
NEK1-206ENST00000510533 MTBPQ96DY7 904 aa11.22□□□□□ -0.61
NEK1-206ENST00000510533 ZMAT2Q96NC0 199 aaKnown RBP11.22□□□□□ -0.61
NEK1-206ENST00000510533 ACAP3Q96P50 834 aa11.22□□□□□ -0.61
NEK1-206ENST00000510533 MRPL4Q9BYD3 311 aaKnown RBP11.22□□□□□ -0.61
NEK1-206ENST00000510533 TRABDQ9H4I3 376 aa11.22□□□□□ -0.61
NEK1-206ENST00000510533 IRAK4Q9NWZ3 460 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms