RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 HYAL3O43820 417 aaPredicted RBP12.25□□□□□ -0.45
SNF8-207ENST00000509995 EFEMP2O95967 443 aa12.25□□□□□ -0.45
SNF8-207ENST00000509995 ALDH2P05091 517 aa12.25□□□□□ -0.45
SNF8-207ENST00000509995 SKIP12755 728 aa12.25□□□□□ -0.45
SNF8-207ENST00000509995 GPC3P51654 580 aa12.25□□□□□ -0.45
SNF8-207ENST00000509995 MCMDC2Q4G0Z9 681 aa12.25□□□□□ -0.45
SNF8-207ENST00000509995 DAB2IPQ5VWQ8 1189 aa12.25□□□□□ -0.45
SNF8-207ENST00000509995 TWF2Q6IBS0 349 aaKnown RBP12.25□□□□□ -0.45
SNF8-207ENST00000509995 TCEAL6Q6IPX3 200 aa12.25□□□□□ -0.45
SNF8-207ENST00000509995 PDXDC2PQ6P474 469 aa12.25□□□□□ -0.45
SNF8-207ENST00000509995 GLYCTKQ8IVS8 523 aa12.25□□□□□ -0.45
SNF8-207ENST00000509995 LINC01465Q8N7H1 131 aa12.25□□□□□ -0.45
SNF8-207ENST00000509995 URGCPQ8TCY9 931 aa12.25□□□□□ -0.45
SNF8-207ENST00000509995 TCEAL3Q969E4 200 aa12.25□□□□□ -0.45
SNF8-207ENST00000509995 UBAC1Q9BSL1 405 aa12.25□□□□□ -0.45
SNF8-207ENST00000509995 PLA2G2FQ9BZM2 168 aa12.25□□□□□ -0.45
SNF8-207ENST00000509995 VPS45Q9NRW7 570 aa12.25□□□□□ -0.45
SNF8-207ENST00000509995 ASCC3Q8N3C0 2202 aaKnown RBP12.25□□□□□ -0.45
SNF8-207ENST00000509995 CACNA1EQ15878 2313 aa12.25□□□□□ -0.45
SNF8-207ENST00000509995 PCNX2A6NKB5 2137 aa12.24□□□□□ -0.45
SNF8-207ENST00000509995 C4orf47A7E2U8 309 aa12.24□□□□□ -0.45
SNF8-207ENST00000509995 ZNF213O14771 459 aa12.24□□□□□ -0.45
SNF8-207ENST00000509995 CCNE2O96020 404 aa12.24□□□□□ -0.45
SNF8-207ENST00000509995 CAPNS1P04632 268 aa12.24□□□□□ -0.45
SNF8-207ENST00000509995 HNRNPA1P09651 372 aaKnown RBP eCLIP12.24□□□□□ -0.45
SNF8-207ENST00000509995 CHRNB1P11230 501 aa12.24□□□□□ -0.45
SNF8-207ENST00000509995 ATP4AP20648 1035 aa12.24□□□□□ -0.45
SNF8-207ENST00000509995 CSRP1P21291 193 aaKnown RBP12.24□□□□□ -0.45
SNF8-207ENST00000509995 TROAPQ12815 778 aa12.24□□□□□ -0.45
SNF8-207ENST00000509995 ITGB3BPQ13352 177 aaPredicted RBP12.24□□□□□ -0.45
SNF8-207ENST00000509995 GRM4Q14833 912 aa12.24□□□□□ -0.45
SNF8-207ENST00000509995 ABHD15Q6UXT9 468 aa12.24□□□□□ -0.45
SNF8-207ENST00000509995 WDR5BQ86VZ2 330 aa12.24□□□□□ -0.45
SNF8-207ENST00000509995 FAM3CQ92520 227 aa12.24□□□□□ -0.45
SNF8-207ENST00000509995 MBOAT7Q96N66 472 aa12.24□□□□□ -0.45
SNF8-207ENST00000509995 SCLT1Q96NL6 688 aa12.24□□□□□ -0.45
SNF8-207ENST00000509995 FAM193BQ96PV7 902 aaPredicted RBP12.24□□□□□ -0.45
SNF8-207ENST00000509995 ZNF302Q9NR11 478 aa12.24□□□□□ -0.45
SNF8-207ENST00000509995 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.24□□□□□ -0.45
SNF8-207ENST00000509995 FAM105AQ9NUU6 356 aa12.24□□□□□ -0.45
SNF8-207ENST00000509995 KLK13Q9UKR3 277 aa12.24□□□□□ -0.45
SNF8-207ENST00000509995 PRG3Q9Y2Y8 225 aaPredicted RBP12.24□□□□□ -0.45
SNF8-207ENST00000509995 MYO18BQ8IUG5 2567 aa12.24□□□□□ -0.45
SNF8-207ENST00000509995 APC2O95996 2303 aa12.23□□□□□ -0.45
SNF8-207ENST00000509995 TDRD15B5MCY1 1934 aaKnown RBP12.23□□□□□ -0.45
SNF8-207ENST00000509995 CSDE1O75534 798 aaKnown RBP12.23□□□□□ -0.45
SNF8-207ENST00000509995 TMOD1P28289 359 aa12.23□□□□□ -0.45
SNF8-207ENST00000509995 HOXA6P31267 233 aa12.23□□□□□ -0.45
SNF8-207ENST00000509995 RAB27AP51159 221 aa12.23□□□□□ -0.45
SNF8-207ENST00000509995 AFF1P51825 1210 aaKnown RBP12.23□□□□□ -0.45
SNF8-207ENST00000509995 PTGDRQ13258 359 aa12.23□□□□□ -0.45
SNF8-207ENST00000509995 SEC23AQ15436 765 aa12.23□□□□□ -0.45
SNF8-207ENST00000509995 EFCAB12Q6NXP0 572 aa12.23□□□□□ -0.45
SNF8-207ENST00000509995 CACNA2D4Q7Z3S7 1137 aa12.23□□□□□ -0.45
SNF8-207ENST00000509995 KBTBD6Q86V97 674 aa12.23□□□□□ -0.45
SNF8-207ENST00000509995 LRRC71Q8N4P6 559 aa12.23□□□□□ -0.45
SNF8-207ENST00000509995 OTUD7AQ8TE49 926 aaPredicted RBP12.23□□□□□ -0.45
SNF8-207ENST00000509995 GAB3Q8WWW8 586 aa12.23□□□□□ -0.45
SNF8-207ENST00000509995 PIBF1Q8WXW3 757 aa12.23□□□□□ -0.45
SNF8-207ENST00000509995 CHST7Q9NS84 486 aa12.23□□□□□ -0.45
SNF8-207ENST00000509995 FNIP2Q9P278 1114 aa12.23□□□□□ -0.45
SNF8-207ENST00000509995 FBXW11Q9UKB1 542 aa12.23□□□□□ -0.45
SNF8-207ENST00000509995 CEP131Q9UPN4 1083 aa12.23□□□□□ -0.45
SNF8-207ENST00000509995 NUP205Q92621 2012 aa12.23□□□□□ -0.45
SNF8-207ENST00000509995 HECTD1Q9ULT8 2610 aa12.23□□□□□ -0.45
SNF8-207ENST00000509995 CCL16O15467 120 aa12.22□□□□□ -0.45
SNF8-207ENST00000509995 MAGEB2O15479 319 aa12.22□□□□□ -0.45
SNF8-207ENST00000509995 ZNF623O75123 536 aa12.22□□□□□ -0.45
SNF8-207ENST00000509995 RPP40O75818 363 aaKnown RBP12.22□□□□□ -0.45
SNF8-207ENST00000509995 HOXA9P31269 272 aa12.22□□□□□ -0.45
SNF8-207ENST00000509995 KIF5BP33176 963 aa12.22□□□□□ -0.45
SNF8-207ENST00000509995 LIN9Q5TKA1 542 aa12.22□□□□□ -0.45
SNF8-207ENST00000509995 AGMOQ6ZNB7 445 aa12.22□□□□□ -0.45
SNF8-207ENST00000509995 CKAP2LQ8IYA6 745 aa12.22□□□□□ -0.45
SNF8-207ENST00000509995 NLRP7Q8WX94 980 aa12.22□□□□□ -0.45
SNF8-207ENST00000509995 ING5Q8WYH8 240 aa12.22□□□□□ -0.45
SNF8-207ENST00000509995 B3GALT6Q96L58 329 aa12.22□□□□□ -0.45
SNF8-207ENST00000509995 MXRA8Q9BRK3 442 aa12.22□□□□□ -0.45
SNF8-207ENST00000509995 BRD9Q9H8M2 597 aa12.22□□□□□ -0.45
SNF8-207ENST00000509995 C2orf42Q9NWW7 574 aa12.22□□□□□ -0.45
SNF8-207ENST00000509995 KANSL3Q9P2N6 904 aa12.22□□□□□ -0.45
SNF8-207ENST00000509995 DACH1Q9UI36 760 aa12.22□□□□□ -0.45
SNF8-207ENST00000509995 KCNH3Q9ULD8 1083 aa12.22□□□□□ -0.45
SNF8-207ENST00000509995 POLIQ9UNA4 740 aa12.22□□□□□ -0.45
SNF8-207ENST00000509995 PIN4Q9Y237 131 aaKnown RBP12.22□□□□□ -0.45
SNF8-207ENST00000509995 PIAS3Q9Y6X2 628 aa12.22□□□□□ -0.45
SNF8-207ENST00000509995 LNP1A1A4G5 178 aa12.21□□□□□ -0.45
SNF8-207ENST00000509995 SPDYE3A6NKU9 549 aa12.21□□□□□ -0.45
SNF8-207ENST00000509995 DDX39AO00148 427 aaKnown RBP12.21□□□□□ -0.45
SNF8-207ENST00000509995 XYLBO75191 536 aa12.21□□□□□ -0.45
SNF8-207ENST00000509995 C8AP07357 584 aa12.21□□□□□ -0.45
SNF8-207ENST00000509995 MS4A1P11836 297 aa12.21□□□□□ -0.45
SNF8-207ENST00000509995 RPL17P18621 184 aaKnown RBP12.21□□□□□ -0.45
SNF8-207ENST00000509995 SFPQP23246 707 aaKnown RBP eCLIP12.21□□□□□ -0.45
SNF8-207ENST00000509995 HOXC13P31276 330 aa12.21□□□□□ -0.45
SNF8-207ENST00000509995 C19orf57Q0VDD7 668 aa12.21□□□□□ -0.45
SNF8-207ENST00000509995 PPM1LQ5SGD2 360 aa12.21□□□□□ -0.45
SNF8-207ENST00000509995 SWSAP1Q6NVH7 229 aa12.21□□□□□ -0.45
SNF8-207ENST00000509995 Q6ZS52 159 aa12.21□□□□□ -0.45
SNF8-207ENST00000509995 TRMT1LQ7Z2T5 733 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms