RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 DAPK3O43293 454 aa9.14□□□□□ -0.95
TRAPPC11-206ENST00000509857 NCLP19338 710 aaKnown RBP9.14□□□□□ -0.95
TRAPPC11-206ENST00000509857 CD69Q07108 199 aa9.14□□□□□ -0.95
TRAPPC11-206ENST00000509857 MTMR1Q13613 665 aa9.14□□□□□ -0.95
TRAPPC11-206ENST00000509857 RPUSD2Q8IZ73 545 aaKnown RBP9.14□□□□□ -0.95
TRAPPC11-206ENST00000509857 PIK3C3Q8NEB9 887 aa9.14□□□□□ -0.95
TRAPPC11-206ENST00000509857 TGFBRAP1Q8WUH2 860 aa9.14□□□□□ -0.95
TRAPPC11-206ENST00000509857 SAMD11Q96NU1 681 aa9.14□□□□□ -0.95
TRAPPC11-206ENST00000509857 CCM2LQ9NUG4 571 aaPredicted RBP9.14□□□□□ -0.95
TRAPPC11-206ENST00000509857 DENND4BO75064 1496 aaPredicted RBP9.14□□□□□ -0.95
TRAPPC11-206ENST00000509857 ANKRD30BQ9BXX2 1392 aa9.13□□□□□ -0.95
TRAPPC11-206ENST00000509857 PATE3B3GLJ2 98 aa9.13□□□□□ -0.95
TRAPPC11-206ENST00000509857 VSIG10L2P0DP72 767 aa9.13□□□□□ -0.95
TRAPPC11-206ENST00000509857 MTHFD2P13995 350 aa9.13□□□□□ -0.95
TRAPPC11-206ENST00000509857 BPIFB4P59827 614 aa9.13□□□□□ -0.95
TRAPPC11-206ENST00000509857 ATP2C1P98194 919 aaPredicted RBP9.13□□□□□ -0.95
TRAPPC11-206ENST00000509857 PLP2Q04941 152 aa9.13□□□□□ -0.95
TRAPPC11-206ENST00000509857 SYDE2Q5VT97 1194 aa9.13□□□□□ -0.95
TRAPPC11-206ENST00000509857 TCTN3Q6NUS6 607 aa9.13□□□□□ -0.95
TRAPPC11-206ENST00000509857 TAX1BP1Q86VP1 789 aa9.13□□□□□ -0.95
TRAPPC11-206ENST00000509857 GPR135Q8IZ08 494 aa9.13□□□□□ -0.95
TRAPPC11-206ENST00000509857 TTC9BQ8N6N2 239 aa9.13□□□□□ -0.95
TRAPPC11-206ENST00000509857 GNRHR2Q96P88 292 aa9.13□□□□□ -0.95
TRAPPC11-206ENST00000509857 MPHOSPH9Q99550 1183 aa9.13□□□□□ -0.95
TRAPPC11-206ENST00000509857 RRP7BPQ9NSQ0 103 aa9.13□□□□□ -0.95
TRAPPC11-206ENST00000509857 EDARQ9UNE0 448 aa9.13□□□□□ -0.95
TRAPPC11-206ENST00000509857 SLC30A1Q9Y6M5 507 aa9.13□□□□□ -0.95
TRAPPC11-206ENST00000509857 RPRD2Q5VT52 1461 aaKnown RBP9.13□□□□□ -0.95
TRAPPC11-206ENST00000509857 CCDC141Q6ZP82 1450 aa9.13□□□□□ -0.95
TRAPPC11-206ENST00000509857 MBD5Q9P267 1494 aa9.13□□□□□ -0.95
TRAPPC11-206ENST00000509857 C9orf84Q5VXU9 1444 aa9.13□□□□□ -0.95
TRAPPC11-206ENST00000509857 KRTAP9-7A8MTY7 169 aa9.12□□□□□ -0.95
TRAPPC11-206ENST00000509857 K7ESM1 405 aa9.12□□□□□ -0.95
TRAPPC11-206ENST00000509857 CDC14BO60729 498 aa9.12□□□□□ -0.95
TRAPPC11-206ENST00000509857 TOX4O94842 621 aa9.12□□□□□ -0.95
TRAPPC11-206ENST00000509857 JUNP05412 331 aaKnown RBP9.12□□□□□ -0.95
TRAPPC11-206ENST00000509857 RPS19P39019 145 aaKnown RBP9.12□□□□□ -0.95
TRAPPC11-206ENST00000509857 KIR2DL3P43628 341 aa9.12□□□□□ -0.95
TRAPPC11-206ENST00000509857 EVA1CP58658 441 aa9.12□□□□□ -0.95
TRAPPC11-206ENST00000509857 MEF2AQ02078 507 aaPredicted RBP9.12□□□□□ -0.95
TRAPPC11-206ENST00000509857 MUM1Q2TAK8 710 aa9.12□□□□□ -0.95
TRAPPC11-206ENST00000509857 LMBR1LQ6UX01 489 aa9.12□□□□□ -0.95
TRAPPC11-206ENST00000509857 SHCBP1Q8NEM2 672 aa9.12□□□□□ -0.95
TRAPPC11-206ENST00000509857 TSPEARQ8WU66 669 aa9.12□□□□□ -0.95
TRAPPC11-206ENST00000509857 AUTS2Q8WXX7 1259 aa9.12□□□□□ -0.95
TRAPPC11-206ENST00000509857 UIMC1Q96RL1 719 aa9.12□□□□□ -0.95
TRAPPC11-206ENST00000509857 SIN3AQ96ST3 1273 aa9.12□□□□□ -0.95
TRAPPC11-206ENST00000509857 GPHA2Q96T91 129 aa9.12□□□□□ -0.95
TRAPPC11-206ENST00000509857 PLA2G12BQ9BX93 195 aa9.12□□□□□ -0.95
TRAPPC11-206ENST00000509857 NELFAQ9H3P2 528 aa9.12□□□□□ -0.95
TRAPPC11-206ENST00000509857 ANKRD50Q9ULJ7 1429 aa9.12□□□□□ -0.95
TRAPPC11-206ENST00000509857 CDC42BPBQ9Y5S2 1711 aa9.11□□□□□ -0.95
TRAPPC11-206ENST00000509857 KATNA1O75449 491 aa9.11□□□□□ -0.95
TRAPPC11-206ENST00000509857 RAD17O75943 681 aa9.11□□□□□ -0.95
TRAPPC11-206ENST00000509857 TSPY4P0CV99 314 aa9.11□□□□□ -0.95
TRAPPC11-206ENST00000509857 TSPY10P0CW01 314 aa9.11□□□□□ -0.95
TRAPPC11-206ENST00000509857 MTNR1BP49286 362 aa9.11□□□□□ -0.95
TRAPPC11-206ENST00000509857 MGAT5Q09328 741 aa9.11□□□□□ -0.95
TRAPPC11-206ENST00000509857 EFEMP1Q12805 493 aa9.11□□□□□ -0.95
TRAPPC11-206ENST00000509857 RIN1Q13671 783 aa9.11□□□□□ -0.95
TRAPPC11-206ENST00000509857 SAFB2Q14151 953 aaKnown RBP eCLIP9.11□□□□□ -0.95
TRAPPC11-206ENST00000509857 TAS1R1Q7RTX1 841 aa9.11□□□□□ -0.95
TRAPPC11-206ENST00000509857 ADGRE4PQ86SQ3 457 aa9.11□□□□□ -0.95
TRAPPC11-206ENST00000509857 ANKRD53Q8N9V6 530 aa9.11□□□□□ -0.95
TRAPPC11-206ENST00000509857 GIMAP8Q8ND71 665 aaPredicted RBP9.11□□□□□ -0.95
TRAPPC11-206ENST00000509857 PAWRQ96IZ0 340 aaKnown RBP9.11□□□□□ -0.95
TRAPPC11-206ENST00000509857 QRSL1Q9H0R6 528 aaKnown RBP9.11□□□□□ -0.95
TRAPPC11-206ENST00000509857 C12orf65Q9H3J6 166 aaKnown RBP9.11□□□□□ -0.95
TRAPPC11-206ENST00000509857 AGO3Q9H9G7 860 aaKnown RBP9.11□□□□□ -0.95
TRAPPC11-206ENST00000509857 DPP7Q9UHL4 492 aa9.11□□□□□ -0.95
TRAPPC11-206ENST00000509857 TRHDEQ9UKU6 1024 aa9.11□□□□□ -0.95
TRAPPC11-206ENST00000509857 KDM6BO15054 1643 aa9.11□□□□□ -0.95
TRAPPC11-206ENST00000509857 WASHC2CQ9Y4E1 1318 aa9.1□□□□□ -0.95
TRAPPC11-206ENST00000509857 PZPP20742 1482 aa9.1□□□□□ -0.95
TRAPPC11-206ENST00000509857 hCG_2014768A0A024R1R8 64 aa9.1□□□□□ -0.95
TRAPPC11-206ENST00000509857 FOXS1O43638 330 aa9.1□□□□□ -0.95
TRAPPC11-206ENST00000509857 TMEM127O75204 238 aa9.1□□□□□ -0.95
TRAPPC11-206ENST00000509857 SRSF2Q01130 221 aaKnown RBP9.1□□□□□ -0.95
TRAPPC11-206ENST00000509857 CD248Q9HCU0 757 aa9.1□□□□□ -0.95
TRAPPC11-206ENST00000509857 ZNF277Q9NRM2 450 aaPredicted RBP9.1□□□□□ -0.95
TRAPPC11-206ENST00000509857 ZFR2Q9UPR6 939 aaKnown RBP9.1□□□□□ -0.95
TRAPPC11-206ENST00000509857 PLXNC1O60486 1568 aa9.1□□□□□ -0.95
TRAPPC11-206ENST00000509857 MYO5CQ9NQX4 1742 aa9.1□□□□□ -0.95
TRAPPC11-206ENST00000509857 ZNF644Q9H582 1327 aaPredicted RBP9.09□□□□□ -0.95
TRAPPC11-206ENST00000509857 SAMD9LQ8IVG5 1584 aa9.09□□□□□ -0.95
TRAPPC11-206ENST00000509857 ALDH1A2O94788 518 aa9.09□□□□□ -0.95
TRAPPC11-206ENST00000509857 ICAM4Q14773 271 aa9.09□□□□□ -0.95
TRAPPC11-206ENST00000509857 ANO4Q32M45 955 aa9.09□□□□□ -0.95
TRAPPC11-206ENST00000509857 TOR2AQ5JU69 321 aa9.09□□□□□ -0.95
TRAPPC11-206ENST00000509857 SSH1Q8WYL5 1049 aa9.09□□□□□ -0.95
TRAPPC11-206ENST00000509857 HOMER2Q9NSB8 354 aa9.09□□□□□ -0.95
TRAPPC11-206ENST00000509857 TYW1Q9NV66 732 aaKnown RBP9.09□□□□□ -0.95
TRAPPC11-206ENST00000509857 DNAJC28Q9NX36 388 aa9.09□□□□□ -0.95
TRAPPC11-206ENST00000509857 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.09□□□□□ -0.95
TRAPPC11-206ENST00000509857 PLCH2O75038 1416 aa9.08□□□□□ -0.96
TRAPPC11-206ENST00000509857 GABRDO14764 452 aa9.08□□□□□ -0.96
TRAPPC11-206ENST00000509857 LTA4HP09960 611 aaKnown RBP9.08□□□□□ -0.96
TRAPPC11-206ENST00000509857 IARSP41252 1262 aaKnown RBP9.08□□□□□ -0.96
TRAPPC11-206ENST00000509857 WNT3AP56704 352 aa9.08□□□□□ -0.96
TRAPPC11-206ENST00000509857 KRT85P78386 507 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms