RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 HPDP32754 393 aaPredicted RBP5.1□□□□□ -1.59
NIPBL-206ENST00000509429 TNNT3P45378 269 aaPredicted RBP5.1□□□□□ -1.59
NIPBL-206ENST00000509429 STT3AP46977 705 aa5.1□□□□□ -1.59
NIPBL-206ENST00000509429 MASP1P48740 699 aa5.1□□□□□ -1.59
NIPBL-206ENST00000509429 PPM1FP49593 454 aaPredicted RBP5.1□□□□□ -1.59
NIPBL-206ENST00000509429 SCRN1Q12765 414 aa5.1□□□□□ -1.59
NIPBL-206ENST00000509429 HMGXB3Q12766 1538 aa5.1□□□□□ -1.59
NIPBL-206ENST00000509429 MRPL28Q13084 256 aaKnown RBP5.1□□□□□ -1.59
NIPBL-206ENST00000509429 ZBTB17Q13105 803 aa5.1□□□□□ -1.59
NIPBL-206ENST00000509429 STK3Q13188 491 aa5.1□□□□□ -1.59
NIPBL-206ENST00000509429 MOGSQ13724 837 aa5.1□□□□□ -1.59
NIPBL-206ENST00000509429 PKN2Q16513 984 aaKnown RBP5.1□□□□□ -1.59
NIPBL-206ENST00000509429 INF2Q27J81 1249 aa5.1□□□□□ -1.59
NIPBL-206ENST00000509429 SPDYCQ5MJ68 293 aa5.1□□□□□ -1.59
NIPBL-206ENST00000509429 SWSAP1Q6NVH7 229 aa5.1□□□□□ -1.59
NIPBL-206ENST00000509429 TRMT10BQ6PF06 316 aaKnown RBP5.1□□□□□ -1.59
NIPBL-206ENST00000509429 MAATS1Q7Z4T9 603 aa5.1□□□□□ -1.59
NIPBL-206ENST00000509429 KIAA0907Q7Z7F0 614 aaPredicted RBP5.1□□□□□ -1.59
NIPBL-206ENST00000509429 PNMA8AQ86V59 439 aaPredicted RBP5.1□□□□□ -1.59
NIPBL-206ENST00000509429 SPATS2Q86XZ4 545 aaKnown RBP5.1□□□□□ -1.59
NIPBL-206ENST00000509429 ADGRG3Q86Y34 549 aa5.1□□□□□ -1.59
NIPBL-206ENST00000509429 TMEM192Q8IY95 271 aa5.1□□□□□ -1.59
NIPBL-206ENST00000509429 THEMISQ8N1K5 641 aaPredicted RBP5.1□□□□□ -1.59
NIPBL-206ENST00000509429 LILRB2Q8N423 598 aa5.1□□□□□ -1.59
NIPBL-206ENST00000509429 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.1□□□□□ -1.59
NIPBL-206ENST00000509429 SPATA18Q8TC71 538 aa5.1□□□□□ -1.59
NIPBL-206ENST00000509429 BRSK1Q8TDC3 778 aa5.1□□□□□ -1.59
NIPBL-206ENST00000509429 IPCEF1Q8WWN9 437 aaPredicted RBP5.1□□□□□ -1.59
NIPBL-206ENST00000509429 JPH3Q8WXH2 748 aaPredicted RBP5.1□□□□□ -1.59
NIPBL-206ENST00000509429 SNX21Q969T3 373 aa5.1□□□□□ -1.59
NIPBL-206ENST00000509429 JAKMIP2Q96AA8 810 aa5.1□□□□□ -1.59
NIPBL-206ENST00000509429 NEIL1Q96FI4 390 aaPredicted RBP5.1□□□□□ -1.59
NIPBL-206ENST00000509429 C1orf74Q96LT6 269 aa5.1□□□□□ -1.59
NIPBL-206ENST00000509429 NEK1Q96PY6 1258 aa5.1□□□□□ -1.59
NIPBL-206ENST00000509429 WRNIP1Q96S55 665 aa5.1□□□□□ -1.59
NIPBL-206ENST00000509429 UTP14AQ9BVJ6 771 aaKnown RBP5.1□□□□□ -1.59
NIPBL-206ENST00000509429 TCF7L2Q9NQB0 619 aa5.1□□□□□ -1.59
NIPBL-206ENST00000509429 SMYD2Q9NRG4 433 aa5.1□□□□□ -1.59
NIPBL-206ENST00000509429 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.1□□□□□ -1.59
NIPBL-206ENST00000509429 TBC1D7Q9P0N9 293 aa5.1□□□□□ -1.59
NIPBL-206ENST00000509429 SPATA7Q9P0W8 599 aa5.1□□□□□ -1.59
NIPBL-206ENST00000509429 GULP1Q9UBP9 304 aa5.1□□□□□ -1.59
NIPBL-206ENST00000509429 DCTN4Q9UJW0 460 aa5.1□□□□□ -1.59
NIPBL-206ENST00000509429 FAM184BQ9ULE4 1060 aa5.1□□□□□ -1.59
NIPBL-206ENST00000509429 INPP5FQ9Y2H2 1132 aa5.1□□□□□ -1.59
NIPBL-206ENST00000509429 DAAM1Q9Y4D1 1078 aa5.1□□□□□ -1.59
NIPBL-206ENST00000509429 CUX2O14529 1486 aa5.09□□□□□ -1.59
NIPBL-206ENST00000509429 LINC00854A0A1B0GVQ3 168 aa5.09□□□□□ -1.59
NIPBL-206ENST00000509429 TBKBP1A7MCY6 615 aa5.09□□□□□ -1.59
NIPBL-206ENST00000509429 M0QX08 132 aa5.09□□□□□ -1.59
NIPBL-206ENST00000509429 TOR1BO14657 336 aa5.09□□□□□ -1.59
NIPBL-206ENST00000509429 SGSM2O43147 1006 aa5.09□□□□□ -1.59
NIPBL-206ENST00000509429 PIP5K1CO60331 668 aa5.09□□□□□ -1.59
NIPBL-206ENST00000509429 NEMFO60524 1076 aa5.09□□□□□ -1.59
NIPBL-206ENST00000509429 B3GALNT1O75752 331 aa5.09□□□□□ -1.59
NIPBL-206ENST00000509429 INMTO95050 263 aa5.09□□□□□ -1.59
NIPBL-206ENST00000509429 IFNGR1P15260 489 aa5.09□□□□□ -1.59
NIPBL-206ENST00000509429 TNFAIP3P21580 790 aa5.09□□□□□ -1.59
NIPBL-206ENST00000509429 CD9P21926 228 aa5.09□□□□□ -1.59
NIPBL-206ENST00000509429 HSPA4P34932 840 aa5.09□□□□□ -1.59
NIPBL-206ENST00000509429 HALP42357 657 aa5.09□□□□□ -1.59
NIPBL-206ENST00000509429 GJA8P48165 433 aa5.09□□□□□ -1.59
NIPBL-206ENST00000509429 TPD52P55327 224 aaPredicted RBP5.09□□□□□ -1.59
NIPBL-206ENST00000509429 MCL1Q07820 350 aa5.09□□□□□ -1.59
NIPBL-206ENST00000509429 DDX10Q13206 875 aaKnown RBP5.09□□□□□ -1.59
NIPBL-206ENST00000509429 CAMK2GQ13555 558 aaPredicted RBP5.09□□□□□ -1.59
NIPBL-206ENST00000509429 PDIA5Q14554 519 aa5.09□□□□□ -1.59
NIPBL-206ENST00000509429 POSTNQ15063 836 aa5.09□□□□□ -1.59
NIPBL-206ENST00000509429 CNGA3Q16281 694 aa5.09□□□□□ -1.59
NIPBL-206ENST00000509429 DACT2Q5SW24 774 aa5.09□□□□□ -1.59
NIPBL-206ENST00000509429 HIBCHQ6NVY1 386 aaPredicted RBP5.09□□□□□ -1.59
NIPBL-206ENST00000509429 MZT2BQ6NZ67 158 aa5.09□□□□□ -1.59
NIPBL-206ENST00000509429 MZT2AQ6P582 158 aa5.09□□□□□ -1.59
NIPBL-206ENST00000509429 LVRNQ6Q4G3 990 aa5.09□□□□□ -1.59
NIPBL-206ENST00000509429 CCDC91Q7Z6B0 441 aa5.09□□□□□ -1.59
NIPBL-206ENST00000509429 MYLK4Q86YV6 388 aaPredicted RBP5.09□□□□□ -1.59
NIPBL-206ENST00000509429 C7orf61Q8IZ16 206 aa5.09□□□□□ -1.59
NIPBL-206ENST00000509429 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.09□□□□□ -1.59
NIPBL-206ENST00000509429 C9orf106Q8NAJ2 232 aa5.09□□□□□ -1.59
NIPBL-206ENST00000509429 DRAXINQ8NBI3 349 aaPredicted RBP5.09□□□□□ -1.59
NIPBL-206ENST00000509429 TTC8Q8TAM2 541 aa5.09□□□□□ -1.59
NIPBL-206ENST00000509429 AFAP1L1Q8TED9 768 aa5.09□□□□□ -1.59
NIPBL-206ENST00000509429 HVCN1Q96D96 273 aa5.09□□□□□ -1.59
NIPBL-206ENST00000509429 BICD1Q96G01 975 aa5.09□□□□□ -1.59
NIPBL-206ENST00000509429 HERPUD2Q9BSE4 406 aa5.09□□□□□ -1.59
NIPBL-206ENST00000509429 CNNM2Q9H8M5 875 aa5.09□□□□□ -1.59
NIPBL-206ENST00000509429 PIH1D1Q9NWS0 290 aaKnown RBP5.09□□□□□ -1.59
NIPBL-206ENST00000509429 CHMP5Q9NZZ3 219 aa5.09□□□□□ -1.59
NIPBL-206ENST00000509429 SEPT10Q9P0V9 454 aa5.09□□□□□ -1.59
NIPBL-206ENST00000509429 CALCOCO1Q9P1Z2 691 aa5.09□□□□□ -1.59
NIPBL-206ENST00000509429 CEP72Q9P209 647 aa5.09□□□□□ -1.59
NIPBL-206ENST00000509429 FBXL5Q9UKA1 691 aa5.09□□□□□ -1.59
NIPBL-206ENST00000509429 MAGED1Q9Y5V3 778 aaPredicted RBP5.09□□□□□ -1.59
NIPBL-206ENST00000509429 RNF123Q5XPI4 1314 aa5.08□□□□□ -1.6
NIPBL-206ENST00000509429 KLRG2A4D1S0 409 aaPredicted RBP5.08□□□□□ -1.6
NIPBL-206ENST00000509429 TRIM64A6NGJ6 449 aa5.08□□□□□ -1.6
NIPBL-206ENST00000509429 TRIM64BA6NI03 449 aa5.08□□□□□ -1.6
NIPBL-206ENST00000509429 C9IYK1 514 aa5.08□□□□□ -1.6
NIPBL-206ENST00000509429 BAG4O95429 457 aaKnown RBP5.08□□□□□ -1.6
NIPBL-206ENST00000509429 PEX11BO96011 259 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms