RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 CYP11B2P19099 503 aa16.39■□□□□ 0.21
UBE2D3-228ENST00000508974 AKAP5P24588 427 aa16.39■□□□□ 0.21
UBE2D3-228ENST00000508974 POU5F1BQ06416 359 aa16.39■□□□□ 0.21
UBE2D3-228ENST00000508974 SMAD4Q13485 552 aaKnown RBP16.39■□□□□ 0.21
UBE2D3-228ENST00000508974 SMC1AQ14683 1233 aaKnown RBP16.39■□□□□ 0.21
UBE2D3-228ENST00000508974 RILPL1Q5EBL4 403 aa16.39■□□□□ 0.21
UBE2D3-228ENST00000508974 KRT79Q5XKE5 535 aa16.39■□□□□ 0.21
UBE2D3-228ENST00000508974 LARP1BQ659C4 914 aaKnown RBP16.39■□□□□ 0.21
UBE2D3-228ENST00000508974 PDE12Q6L8Q7 609 aaKnown RBP16.39■□□□□ 0.21
UBE2D3-228ENST00000508974 ZBTB8OSQ8IWT0 167 aa16.39■□□□□ 0.21
UBE2D3-228ENST00000508974 VPS52Q8N1B4 723 aa16.39■□□□□ 0.21
UBE2D3-228ENST00000508974 IGSF21Q96ID5 467 aa16.39■□□□□ 0.21
UBE2D3-228ENST00000508974 ZFP42Q96MM3 310 aa16.39■□□□□ 0.21
UBE2D3-228ENST00000508974 GAD1Q99259 594 aa16.39■□□□□ 0.21
UBE2D3-228ENST00000508974 KIFC3Q9BVG8 833 aa16.39■□□□□ 0.21
UBE2D3-228ENST00000508974 NFKBIZQ9BYH8 718 aa16.39■□□□□ 0.21
UBE2D3-228ENST00000508974 NGRNQ9NPE2 291 aaKnown RBP16.39■□□□□ 0.21
UBE2D3-228ENST00000508974 CNTNAP2Q9UHC6 1331 aa16.39■□□□□ 0.21
UBE2D3-228ENST00000508974 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.38■□□□□ 0.21
UBE2D3-228ENST00000508974 ARL5CA6NH57 179 aa16.38■□□□□ 0.21
UBE2D3-228ENST00000508974 TTLL13PA6NNM8 815 aa16.38■□□□□ 0.21
UBE2D3-228ENST00000508974 LAD1O00515 517 aa16.38■□□□□ 0.21
UBE2D3-228ENST00000508974 SSBP05455 408 aaKnown RBP eCLIP16.38■□□□□ 0.21
UBE2D3-228ENST00000508974 SCNN1GP51170 649 aa16.38■□□□□ 0.21
UBE2D3-228ENST00000508974 ZP2Q05996 745 aa16.38■□□□□ 0.21
UBE2D3-228ENST00000508974 PDIA5Q14554 519 aa16.38■□□□□ 0.21
UBE2D3-228ENST00000508974 PCBP1Q15365 356 aaKnown RBP eCLIP16.38■□□□□ 0.219e-7■□□□□ 10.8
UBE2D3-228ENST00000508974 SMAD2Q15796 467 aaKnown RBP16.38■□□□□ 0.21
UBE2D3-228ENST00000508974 SLC27A1Q6PCB7 646 aa16.38■□□□□ 0.21
UBE2D3-228ENST00000508974 CNNM3Q8NE01 707 aa16.38■□□□□ 0.21
UBE2D3-228ENST00000508974 DEPTORQ8TB45 409 aa16.38■□□□□ 0.21
UBE2D3-228ENST00000508974 CCDC51Q96ER9 411 aa16.38■□□□□ 0.21
UBE2D3-228ENST00000508974 PLIN2Q99541 437 aa16.38■□□□□ 0.21
UBE2D3-228ENST00000508974 KLK14Q9P0G3 267 aa16.38■□□□□ 0.21
UBE2D3-228ENST00000508974 PRG3Q9Y2Y8 225 aaPredicted RBP16.38■□□□□ 0.21
UBE2D3-228ENST00000508974 MYH11P35749 1972 aa16.38■□□□□ 0.21
UBE2D3-228ENST00000508974 VWA3AA6NCI4 1184 aa16.37■□□□□ 0.21
UBE2D3-228ENST00000508974 FAM86C2PA6NEL3 165 aa16.37■□□□□ 0.21
UBE2D3-228ENST00000508974 C2orf71A6NGG8 1288 aa16.37■□□□□ 0.21
UBE2D3-228ENST00000508974 CXCL14O95715 111 aa16.37■□□□□ 0.21
UBE2D3-228ENST00000508974 EDN1P05305 212 aa16.37■□□□□ 0.21
UBE2D3-228ENST00000508974 MUTP22033 750 aa16.37■□□□□ 0.21
UBE2D3-228ENST00000508974 PRPHP41219 470 aa16.37■□□□□ 0.21
UBE2D3-228ENST00000508974 OR1G1P47890 313 aa16.37■□□□□ 0.21
UBE2D3-228ENST00000508974 CDCA2Q69YH5 1023 aaPredicted RBP16.37■□□□□ 0.21
UBE2D3-228ENST00000508974 KCNK18Q7Z418 384 aa16.37■□□□□ 0.21
UBE2D3-228ENST00000508974 ADHFE1Q8IWW8 467 aa16.37■□□□□ 0.21
UBE2D3-228ENST00000508974 MRPL43Q8N983 215 aaKnown RBP16.37■□□□□ 0.21
UBE2D3-228ENST00000508974 SMRP1Q8NCR6 262 aa16.37■□□□□ 0.21
UBE2D3-228ENST00000508974 RSPH1Q8WYR4 309 aa16.37■□□□□ 0.21
UBE2D3-228ENST00000508974 CDCA3Q99618 268 aaPredicted RBP16.37■□□□□ 0.21
UBE2D3-228ENST00000508974 VN1R3Q9BXE9 311 aa16.37■□□□□ 0.21
UBE2D3-228ENST00000508974 ZBP1Q9H171 429 aa16.37■□□□□ 0.21
UBE2D3-228ENST00000508974 PRMT7Q9NVM4 692 aaPredicted RBP16.37■□□□□ 0.21
UBE2D3-228ENST00000508974 MIOSQ9NXC5 875 aa16.37■□□□□ 0.21
UBE2D3-228ENST00000508974 PARP2Q9UGN5 583 aa16.37■□□□□ 0.21
UBE2D3-228ENST00000508974 FAN1Q9Y2M0 1017 aa16.37■□□□□ 0.21
UBE2D3-228ENST00000508974 USP15Q9Y4E8 981 aaPredicted RBP16.37■□□□□ 0.21
UBE2D3-228ENST00000508974 A0A1B0GUA9 196 aa16.36■□□□□ 0.21
UBE2D3-228ENST00000508974 VPS37CA5D8V6 355 aaPredicted RBP16.36■□□□□ 0.21
UBE2D3-228ENST00000508974 NRP1O14786 923 aa16.36■□□□□ 0.21
UBE2D3-228ENST00000508974 PRKCBP05771 671 aa16.36■□□□□ 0.21
UBE2D3-228ENST00000508974 SRGAP2BP0DMP2 458 aa16.36■□□□□ 0.21
UBE2D3-228ENST00000508974 NAMPTP43490 491 aa16.36■□□□□ 0.21
UBE2D3-228ENST00000508974 ATP2C1P98194 919 aaPredicted RBP16.36■□□□□ 0.21
UBE2D3-228ENST00000508974 COASYQ13057 564 aa16.36■□□□□ 0.21
UBE2D3-228ENST00000508974 PRPF4BQ13523 1007 aaKnown RBP16.36■□□□□ 0.21
UBE2D3-228ENST00000508974 DDX53Q86TM3 631 aaKnown RBP16.36■□□□□ 0.21
UBE2D3-228ENST00000508974 TMEM87AQ8NBN3 555 aa16.36■□□□□ 0.21
UBE2D3-228ENST00000508974 IFT74Q96LB3 600 aa16.36■□□□□ 0.21
UBE2D3-228ENST00000508974 MMTAG2Q9BU76 263 aaKnown RBP16.36■□□□□ 0.21
UBE2D3-228ENST00000508974 C2orf40Q9H1Z8 148 aa16.36■□□□□ 0.21
UBE2D3-228ENST00000508974 PDZD7Q9H5P4 517 aa16.36■□□□□ 0.21
UBE2D3-228ENST00000508974 UBN1Q9NPG3 1134 aa16.36■□□□□ 0.21
UBE2D3-228ENST00000508974 KANSL3Q9P2N6 904 aa16.36■□□□□ 0.21
UBE2D3-228ENST00000508974 DNM3Q9UQ16 869 aa16.36■□□□□ 0.21
UBE2D3-228ENST00000508974 F8W810 466 aa16.35■□□□□ 0.21
UBE2D3-228ENST00000508974 EYA4O95677 639 aa16.35■□□□□ 0.21
UBE2D3-228ENST00000508974 ALDH2P05091 517 aa16.35■□□□□ 0.21
UBE2D3-228ENST00000508974 RAD51AP2Q09MP3 1159 aa16.35■□□□□ 0.21
UBE2D3-228ENST00000508974 BMS1Q14692 1282 aaKnown RBP16.35■□□□□ 0.21
UBE2D3-228ENST00000508974 PPP2R5AQ15172 486 aa16.35■□□□□ 0.21
UBE2D3-228ENST00000508974 MAPK6Q16659 721 aa16.35■□□□□ 0.21
UBE2D3-228ENST00000508974 ANKRD54Q6NXT1 300 aa16.35■□□□□ 0.21
UBE2D3-228ENST00000508974 HACE1Q8IYU2 909 aa16.35■□□□□ 0.21
UBE2D3-228ENST00000508974 RABGGTAQ92696 567 aa16.35■□□□□ 0.21
UBE2D3-228ENST00000508974 PRIMPOLQ96LW4 560 aa16.35■□□□□ 0.21
UBE2D3-228ENST00000508974 RUSC1Q9BVN2 902 aa16.35■□□□□ 0.21
UBE2D3-228ENST00000508974 BACH2Q9BYV9 841 aa16.35■□□□□ 0.21
UBE2D3-228ENST00000508974 CCDC113Q9H0I3 377 aa16.35■□□□□ 0.21
UBE2D3-228ENST00000508974 FZD8Q9H461 694 aa16.35■□□□□ 0.21
UBE2D3-228ENST00000508974 CACNG4Q9UBN1 327 aa16.35■□□□□ 0.21
UBE2D3-228ENST00000508974 PRKAG3Q9UGI9 489 aa16.35■□□□□ 0.21
UBE2D3-228ENST00000508974 RAPGEFL1Q9UHV5 662 aa16.35■□□□□ 0.21
UBE2D3-228ENST00000508974 CDH22Q9UJ99 828 aa16.35■□□□□ 0.21
UBE2D3-228ENST00000508974 HCFC2Q9Y5Z7 792 aa16.35■□□□□ 0.21
UBE2D3-228ENST00000508974 STK24Q9Y6E0 443 aa16.35■□□□□ 0.21
UBE2D3-228ENST00000508974 PLXNA3P51805 1871 aa16.34■□□□□ 0.21
UBE2D3-228ENST00000508974 FSD2A1L4K1 749 aa16.34■□□□□ 0.21
UBE2D3-228ENST00000508974 CCDC169A6NNP5 214 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms