RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 LONP1P36776 959 aaKnown RBP9.59□□□□□ -0.87
SNCA-211ENST00000508895 BCAR1P56945 870 aa9.59□□□□□ -0.87
SNCA-211ENST00000508895 KRT85P78386 507 aa9.59□□□□□ -0.87
SNCA-211ENST00000508895 CACNB1Q02641 598 aaPredicted RBP9.59□□□□□ -0.87
SNCA-211ENST00000508895 ODR4Q5SWX8 454 aa9.59□□□□□ -0.87
SNCA-211ENST00000508895 AXDND1Q5T1B0 1012 aaPredicted RBP9.59□□□□□ -0.87
SNCA-211ENST00000508895 SPOUT1Q5T280 376 aaKnown RBP9.59□□□□□ -0.87
SNCA-211ENST00000508895 NT5DC1Q5TFE4 455 aa9.59□□□□□ -0.87
SNCA-211ENST00000508895 KRT79Q5XKE5 535 aa9.59□□□□□ -0.87
SNCA-211ENST00000508895 CDCA2Q69YH5 1023 aaPredicted RBP9.59□□□□□ -0.87
SNCA-211ENST00000508895 ATL3Q6DD88 541 aa9.59□□□□□ -0.87
SNCA-211ENST00000508895 KANK3Q6NY19 840 aa9.59□□□□□ -0.87
SNCA-211ENST00000508895 C1orf186Q6ZWK4 172 aa9.59□□□□□ -0.87
SNCA-211ENST00000508895 CABP7Q86V35 215 aa9.59□□□□□ -0.87
SNCA-211ENST00000508895 SLC39A11Q8N1S5 342 aa9.59□□□□□ -0.87
SNCA-211ENST00000508895 KRI1Q8N9T8 703 aaKnown RBP9.59□□□□□ -0.87
SNCA-211ENST00000508895 LEO1Q8WVC0 666 aaPredicted RBP9.59□□□□□ -0.87
SNCA-211ENST00000508895 TCP11Q8WWU5 503 aa9.59□□□□□ -0.87
SNCA-211ENST00000508895 RABGGTAQ92696 567 aa9.59□□□□□ -0.87
SNCA-211ENST00000508895 EPSTI1Q96J88 318 aa9.59□□□□□ -0.87
SNCA-211ENST00000508895 ZFP42Q96MM3 310 aa9.59□□□□□ -0.87
SNCA-211ENST00000508895 JPH2Q9BR39 696 aaPredicted RBP9.59□□□□□ -0.87
SNCA-211ENST00000508895 APOL6Q9BWW8 343 aa9.59□□□□□ -0.87
SNCA-211ENST00000508895 PLVAPQ9BX97 442 aa9.59□□□□□ -0.87
SNCA-211ENST00000508895 FZD8Q9H461 694 aa9.59□□□□□ -0.87
SNCA-211ENST00000508895 BLOC1S4Q9NUP1 217 aa9.59□□□□□ -0.87
SNCA-211ENST00000508895 PPME1Q9Y570 386 aa9.59□□□□□ -0.87
SNCA-211ENST00000508895 IPPQ9Y573 584 aa9.59□□□□□ -0.87
SNCA-211ENST00000508895 MYO10Q9HD67 2058 aa9.59□□□□□ -0.87
SNCA-211ENST00000508895 A0A087X0B3 334 aa9.58□□□□□ -0.88
SNCA-211ENST00000508895 ARHGEF35A5YM69 484 aa9.58□□□□□ -0.88
SNCA-211ENST00000508895 ASAP2O43150 1006 aa9.58□□□□□ -0.88
SNCA-211ENST00000508895 GAS2O43903 313 aaKnown RBP9.58□□□□□ -0.88
SNCA-211ENST00000508895 NPTXRO95502 500 aa9.58□□□□□ -0.88
SNCA-211ENST00000508895 EYA4O95677 639 aa9.58□□□□□ -0.88
SNCA-211ENST00000508895 POMCP01189 267 aa9.58□□□□□ -0.88
SNCA-211ENST00000508895 GALTP07902 379 aa9.58□□□□□ -0.88
SNCA-211ENST00000508895 LIG1P18858 919 aa9.58□□□□□ -0.88
SNCA-211ENST00000508895 PLCG1P19174 1290 aa9.58□□□□□ -0.88
SNCA-211ENST00000508895 NCLP19338 710 aaKnown RBP9.58□□□□□ -0.88
SNCA-211ENST00000508895 AKAP5P24588 427 aa9.58□□□□□ -0.88
SNCA-211ENST00000508895 NRIP1P48552 1158 aa9.58□□□□□ -0.88
SNCA-211ENST00000508895 POU5F1BQ06416 359 aa9.58□□□□□ -0.88
SNCA-211ENST00000508895 RAD51AP2Q09MP3 1159 aa9.58□□□□□ -0.88
SNCA-211ENST00000508895 ADAM15Q13444 863 aa9.58□□□□□ -0.88
SNCA-211ENST00000508895 KCNC3Q14003 757 aa9.58□□□□□ -0.88
SNCA-211ENST00000508895 MXD4Q14582 209 aaPredicted RBP9.58□□□□□ -0.88
SNCA-211ENST00000508895 KARSQ15046 597 aaKnown RBP9.58□□□□□ -0.88
SNCA-211ENST00000508895 ZRSR1Q15695 479 aaKnown RBP9.58□□□□□ -0.88
SNCA-211ENST00000508895 LEXMQ3ZCV2 418 aa9.58□□□□□ -0.88
SNCA-211ENST00000508895 TIGD5Q53EQ6 642 aa9.58□□□□□ -0.88
SNCA-211ENST00000508895 ARSHQ5FYA8 562 aa9.58□□□□□ -0.88
SNCA-211ENST00000508895 NOMO2Q5JPE7 1267 aa9.58□□□□□ -0.88
SNCA-211ENST00000508895 PLPP4Q5VZY2 271 aa9.58□□□□□ -0.88
SNCA-211ENST00000508895 RINT1Q6NUQ1 792 aa9.58□□□□□ -0.88
SNCA-211ENST00000508895 TAS1R1Q7RTX1 841 aa9.58□□□□□ -0.88
SNCA-211ENST00000508895 THNSL1Q8IYQ7 743 aa9.58□□□□□ -0.88
SNCA-211ENST00000508895 ZNF710Q8N1W2 664 aa9.58□□□□□ -0.88
SNCA-211ENST00000508895 KCNG4Q8TDN1 519 aa9.58□□□□□ -0.88
SNCA-211ENST00000508895 PABPC5Q96DU9 382 aaKnown RBP9.58□□□□□ -0.88
SNCA-211ENST00000508895 MSLNLQ96KJ4 702 aa9.58□□□□□ -0.88
SNCA-211ENST00000508895 IPO9Q96P70 1041 aaKnown RBP9.58□□□□□ -0.88
SNCA-211ENST00000508895 UHRF1Q96T88 793 aaPredicted RBP9.58□□□□□ -0.88
SNCA-211ENST00000508895 GAD1Q99259 594 aa9.58□□□□□ -0.88
SNCA-211ENST00000508895 CCSER1Q9C0I3 900 aa9.58□□□□□ -0.88
SNCA-211ENST00000508895 GBP3Q9H0R5 595 aa9.58□□□□□ -0.88
SNCA-211ENST00000508895 PDZD7Q9H5P4 517 aa9.58□□□□□ -0.88
SNCA-211ENST00000508895 GDPD2Q9HCC8 539 aa9.58□□□□□ -0.88
SNCA-211ENST00000508895 MARCH5Q9NX47 278 aa9.58□□□□□ -0.88
SNCA-211ENST00000508895 CLDND1Q9NY35 253 aa9.58□□□□□ -0.88
SNCA-211ENST00000508895 KLK14Q9P0G3 267 aa9.58□□□□□ -0.88
SNCA-211ENST00000508895 CFAP45Q9UL16 551 aa9.58□□□□□ -0.88
SNCA-211ENST00000508895 BARX2Q9UMQ3 279 aaPredicted RBP9.58□□□□□ -0.88
SNCA-211ENST00000508895 COG5Q9UP83 839 aa9.58□□□□□ -0.88
SNCA-211ENST00000508895 RWDD3Q9Y3V2 267 aa9.58□□□□□ -0.88
SNCA-211ENST00000508895 ATP6V1DQ9Y5K8 247 aa9.58□□□□□ -0.88
SNCA-211ENST00000508895 CFAP54Q96N23 3096 aa9.58□□□□□ -0.88
SNCA-211ENST00000508895 C2orf16Q68DN1 1984 aa9.57□□□□□ -0.88
SNCA-211ENST00000508895 A0A1B0GUA9 196 aa9.57□□□□□ -0.88
SNCA-211ENST00000508895 ABLIM1O14639 778 aa9.57□□□□□ -0.88
SNCA-211ENST00000508895 SLC26A4O43511 780 aa9.57□□□□□ -0.88
SNCA-211ENST00000508895 CUTAO60888 179 aa9.57□□□□□ -0.88
SNCA-211ENST00000508895 HIP1RO75146 1068 aa9.57□□□□□ -0.88
SNCA-211ENST00000508895 ZC3H11AO75152 810 aaKnown RBP eCLIP9.57□□□□□ -0.88
SNCA-211ENST00000508895 LAG3P18627 525 aa9.57□□□□□ -0.88
SNCA-211ENST00000508895 MLH1P40692 756 aa9.57□□□□□ -0.88
SNCA-211ENST00000508895 SCNN1GP51170 649 aa9.57□□□□□ -0.88
SNCA-211ENST00000508895 SLC12A3P55017 1021 aa9.57□□□□□ -0.88
SNCA-211ENST00000508895 CDC42EP1Q00587 391 aa9.57□□□□□ -0.88
SNCA-211ENST00000508895 PLCB3Q01970 1234 aa9.57□□□□□ -0.88
SNCA-211ENST00000508895 PTPROQ16827 1216 aa9.57□□□□□ -0.88
SNCA-211ENST00000508895 SHC4Q6S5L8 630 aa9.57□□□□□ -0.88
SNCA-211ENST00000508895 EP400NLQ6ZTU2 488 aa9.57□□□□□ -0.88
SNCA-211ENST00000508895 ALYREFQ86V81 257 aaKnown RBP9.57□□□□□ -0.88
SNCA-211ENST00000508895 LRRC43Q8N309 656 aa9.57□□□□□ -0.88
SNCA-211ENST00000508895 CEP120Q8N960 986 aa9.57□□□□□ -0.88
SNCA-211ENST00000508895 MRPS27Q92552 414 aaKnown RBP9.57□□□□□ -0.88
SNCA-211ENST00000508895 ZNF558Q96NG5 402 aa9.57□□□□□ -0.88
SNCA-211ENST00000508895 PAAF1Q9BRP4 392 aa9.57□□□□□ -0.88
SNCA-211ENST00000508895 NFKBIZQ9BYH8 718 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms