RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 SYNGAP1Q96PV0 1343 aa12.53□□□□□ -0.4
PRPF40B-203ENST00000508736 ARID2Q68CP9 1835 aa12.53□□□□□ -0.4
PRPF40B-203ENST00000508736 TMEM150BA6NC51 233 aa12.53□□□□□ -0.4
PRPF40B-203ENST00000508736 SOWAHBA6NEL2 793 aa12.53□□□□□ -0.4
PRPF40B-203ENST00000508736 P4HA2O15460 535 aa12.53□□□□□ -0.4
PRPF40B-203ENST00000508736 OPA1O60313 960 aa12.53□□□□□ -0.4
PRPF40B-203ENST00000508736 EXOC3O60645 756 aa12.53□□□□□ -0.4
PRPF40B-203ENST00000508736 CAPN2P17655 700 aa12.53□□□□□ -0.4
PRPF40B-203ENST00000508736 SOX5P35711 763 aa12.53□□□□□ -0.4
PRPF40B-203ENST00000508736 CYP2J2P51589 502 aa12.53□□□□□ -0.4
PRPF40B-203ENST00000508736 MYL7Q01449 175 aa12.53□□□□□ -0.4
PRPF40B-203ENST00000508736 SP2Q02086 613 aa12.53□□□□□ -0.4
PRPF40B-203ENST00000508736 PRKCEQ02156 737 aa12.53□□□□□ -0.4
PRPF40B-203ENST00000508736 BFSP1Q12934 665 aa12.53□□□□□ -0.4
PRPF40B-203ENST00000508736 NEDD9Q14511 834 aa12.53□□□□□ -0.4
PRPF40B-203ENST00000508736 FAM102BQ5T8I3 360 aa12.53□□□□□ -0.4
PRPF40B-203ENST00000508736 SPRYD7Q5W111 196 aa12.53□□□□□ -0.4
PRPF40B-203ENST00000508736 GPAT2Q6NUI2 795 aa12.53□□□□□ -0.4
PRPF40B-203ENST00000508736 KCNV1Q6PIU1 500 aa12.53□□□□□ -0.4
PRPF40B-203ENST00000508736 MAEAQ7L5Y9 396 aa12.53□□□□□ -0.4
PRPF40B-203ENST00000508736 MAP4K3Q8IVH8 894 aa12.53□□□□□ -0.4
PRPF40B-203ENST00000508736 TMEM161BQ8NDZ6 487 aa12.53□□□□□ -0.4
PRPF40B-203ENST00000508736 SHCBP1Q8NEM2 672 aa12.53□□□□□ -0.4
PRPF40B-203ENST00000508736 VTI1AQ96AJ9 217 aa12.53□□□□□ -0.4
PRPF40B-203ENST00000508736 RUFY1Q96T51 708 aa12.53□□□□□ -0.4
PRPF40B-203ENST00000508736 STK33Q9BYT3 514 aa12.53□□□□□ -0.4
PRPF40B-203ENST00000508736 CYP26B1Q9NR63 512 aa12.53□□□□□ -0.4
PRPF40B-203ENST00000508736 EHD2Q9NZN4 543 aa12.53□□□□□ -0.4
PRPF40B-203ENST00000508736 RBPJLQ9UBG7 517 aa12.53□□□□□ -0.4
PRPF40B-203ENST00000508736 NENFQ9UMX5 172 aa12.53□□□□□ -0.4
PRPF40B-203ENST00000508736 LRRC37A2A6NM11 1700 aa12.52□□□□□ -0.41
PRPF40B-203ENST00000508736 F8VZ95 297 aa12.52□□□□□ -0.41
PRPF40B-203ENST00000508736 H0YCG3 227 aa12.52□□□□□ -0.41
PRPF40B-203ENST00000508736 PMM2O15305 246 aa12.52□□□□□ -0.41
PRPF40B-203ENST00000508736 PHACTR2O75167 634 aa12.52□□□□□ -0.41
PRPF40B-203ENST00000508736 KIF4AO95239 1232 aa12.52□□□□□ -0.41
PRPF40B-203ENST00000508736 SYF2O95926 243 aaKnown RBP12.52□□□□□ -0.41
PRPF40B-203ENST00000508736 KRT13P13646 458 aa12.52□□□□□ -0.41
PRPF40B-203ENST00000508736 ACTN2P35609 894 aa12.52□□□□□ -0.41
PRPF40B-203ENST00000508736 NPTX2P47972 431 aa12.52□□□□□ -0.41
PRPF40B-203ENST00000508736 DNA2P51530 1060 aa12.52□□□□□ -0.41
PRPF40B-203ENST00000508736 CETN1Q12798 172 aa12.52□□□□□ -0.41
PRPF40B-203ENST00000508736 SNAPC2Q13487 334 aa12.52□□□□□ -0.41
PRPF40B-203ENST00000508736 ALS2CLQ60I27 953 aa12.52□□□□□ -0.41
PRPF40B-203ENST00000508736 XXYLT1Q8NBI6 393 aa12.52□□□□□ -0.41
PRPF40B-203ENST00000508736 HDAC7Q8WUI4 952 aa12.52□□□□□ -0.41
PRPF40B-203ENST00000508736 MS4A14Q96JA4 679 aa12.52□□□□□ -0.41
PRPF40B-203ENST00000508736 IKZF4Q9H2S9 585 aa12.52□□□□□ -0.41
PRPF40B-203ENST00000508736 MROH8Q9H579 483 aa12.52□□□□□ -0.41
PRPF40B-203ENST00000508736 GPRC5CQ9NQ84 441 aa12.52□□□□□ -0.41
PRPF40B-203ENST00000508736 SMARCAL1Q9NZC9 954 aa12.52□□□□□ -0.41
PRPF40B-203ENST00000508736 PPME1Q9Y570 386 aa12.52□□□□□ -0.41
PRPF40B-203ENST00000508736 DNAJC25-GNG10A0A024R161 153 aa12.51□□□□□ -0.41
PRPF40B-203ENST00000508736 GOLGA8KD6RF30 607 aa12.51□□□□□ -0.41
PRPF40B-203ENST00000508736 KCNK3O14649 394 aa12.51□□□□□ -0.41
PRPF40B-203ENST00000508736 HSF2BPO75031 334 aa12.51□□□□□ -0.41
PRPF40B-203ENST00000508736 IVLP07476 585 aa12.51□□□□□ -0.41
PRPF40B-203ENST00000508736 UBA1P22314 1058 aaKnown RBP12.51□□□□□ -0.41
PRPF40B-203ENST00000508736 GGCXP38435 758 aa12.51□□□□□ -0.41
PRPF40B-203ENST00000508736 HTRA3P83110 453 aa12.51□□□□□ -0.41
PRPF40B-203ENST00000508736 SLC7A5Q01650 507 aa12.51□□□□□ -0.41
PRPF40B-203ENST00000508736 ENPEPQ07075 957 aa12.51□□□□□ -0.41
PRPF40B-203ENST00000508736 ZSCAN26Q16670 478 aa12.51□□□□□ -0.41
PRPF40B-203ENST00000508736 DEFB115Q30KQ5 88 aa12.51□□□□□ -0.41
PRPF40B-203ENST00000508736 CYP4F22Q6NT55 531 aa12.51□□□□□ -0.41
PRPF40B-203ENST00000508736 CYFIP1Q7L576 1253 aa12.51□□□□□ -0.41
PRPF40B-203ENST00000508736 RASAL3Q86YV0 1011 aa12.51□□□□□ -0.41
PRPF40B-203ENST00000508736 USP38Q8NB14 1042 aa12.51□□□□□ -0.41
PRPF40B-203ENST00000508736 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.51□□□□□ -0.41
PRPF40B-203ENST00000508736 GDAP1L1Q96MZ0 367 aa12.51□□□□□ -0.41
PRPF40B-203ENST00000508736 PAGR1Q9BTK6 254 aa12.51□□□□□ -0.41
PRPF40B-203ENST00000508736 NIFKQ9BYG3 293 aaKnown RBP12.51□□□□□ -0.41
PRPF40B-203ENST00000508736 INTS2Q9H0H0 1204 aaKnown RBP12.51□□□□□ -0.41
PRPF40B-203ENST00000508736 ATP6V0A4Q9HBG4 840 aa12.51□□□□□ -0.41
PRPF40B-203ENST00000508736 ZNF302Q9NR11 478 aa12.51□□□□□ -0.41
PRPF40B-203ENST00000508736 APEX2Q9UBZ4 518 aa12.51□□□□□ -0.41
PRPF40B-203ENST00000508736 PNMA3Q9UL41 463 aa12.51□□□□□ -0.41
PRPF40B-203ENST00000508736 TBX20Q9UMR3 447 aa12.51□□□□□ -0.41
PRPF40B-203ENST00000508736 SLC45A1Q9Y2W3 748 aa12.51□□□□□ -0.41
PRPF40B-203ENST00000508736 SLC16A4O15374 487 aa12.51□□□□□ -0.41
PRPF40B-203ENST00000508736 EVI5O60447 810 aa12.51□□□□□ -0.41
PRPF40B-203ENST00000508736 FARP2O94887 1054 aaPredicted RBP12.51□□□□□ -0.41
PRPF40B-203ENST00000508736 HEXIM1O94992 359 aaKnown RBP12.51□□□□□ -0.41
PRPF40B-203ENST00000508736 ZBTB48P10074 688 aaPredicted RBP12.51□□□□□ -0.41
PRPF40B-203ENST00000508736 GTF2A2P52657 109 aa12.51□□□□□ -0.41
PRPF40B-203ENST00000508736 KCTD2Q14681 263 aa12.51□□□□□ -0.41
PRPF40B-203ENST00000508736 SEPT14Q6ZU15 432 aa12.51□□□□□ -0.41
PRPF40B-203ENST00000508736 PEX26Q7Z412 305 aa12.51□□□□□ -0.41
PRPF40B-203ENST00000508736 LRRC57Q8N9N7 239 aa12.51□□□□□ -0.41
PRPF40B-203ENST00000508736 TPCN2Q8NHX9 752 aa12.51□□□□□ -0.41
PRPF40B-203ENST00000508736 ACTRT1Q8TDG2 376 aa12.51□□□□□ -0.41
PRPF40B-203ENST00000508736 MORC4Q8TE76 937 aa12.51□□□□□ -0.41
PRPF40B-203ENST00000508736 U2AF1L4Q8WU68 220 aaKnown RBP12.51□□□□□ -0.41
PRPF40B-203ENST00000508736 CALR3Q96L12 384 aaKnown RBP12.51□□□□□ -0.41
PRPF40B-203ENST00000508736 SH2D3AQ9BRG2 576 aa12.51□□□□□ -0.41
PRPF40B-203ENST00000508736 TXNRD2Q9NNW7 524 aa12.51□□□□□ -0.41
PRPF40B-203ENST00000508736 KMT5AQ9NQR1 393 aa12.51□□□□□ -0.41
PRPF40B-203ENST00000508736 XPNPEP1Q9NQW7 623 aa12.51□□□□□ -0.41
PRPF40B-203ENST00000508736 GDF3Q9NR23 364 aa12.51□□□□□ -0.41
PRPF40B-203ENST00000508736 HSPBP1Q9NZL4 362 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms