RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 FAM109BQ6ICB4 259 aaPredicted RBP4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 NSMFQ6X4W1 530 aa4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 C22orf34Q6ZV56 151 aa4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 Q7L0L9 218 aa4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 CCDC144CPQ8IYA2 1237 aa4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 LRRC47Q8N1G4 583 aaKnown RBP4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 C19orf47Q8N9M1 422 aaKnown RBP4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 DTWD2Q8NBA8 298 aa4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 MAFAQ8NHW3 353 aaPredicted RBP4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 PPM1EQ8WY54 764 aa4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 USP6NLQ92738 828 aa4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 RILPL2Q969X0 211 aa4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 CHMP4CQ96CF2 233 aa4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 HRASLS5Q96KN8 279 aa4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 DHRS1Q96LJ7 313 aa4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 TNKS2Q9H2K2 1166 aa4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 RWDD1Q9H446 243 aaPredicted RBP4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 SLC28A3Q9HAS3 691 aa4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 RAVER2Q9HCJ3 691 aaKnown RBP4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 DIAPH3Q9NSV4 1193 aa4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 ZBTB40Q9NUA8 1239 aa4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 SUCOQ9UBS9 1254 aaKnown RBP4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 KCNH3Q9ULD8 1083 aa4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 CCPG1Q9ULG6 757 aa4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 PCDHB10Q9UN67 800 aa4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 ELP1O95163 1332 aa4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 DDX60LQ5H9U9 1706 aaKnown RBP4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 TCRBV5S4A2TA0A5A2 114 aa4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 ERICH2A1L162 156 aa4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 C9IYK1 514 aa4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 HIP1O00291 1037 aa4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 CNMDO75829 334 aa4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 STK10O94804 968 aaKnown RBP4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 NDUFB10O96000 172 aa4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 TIMP1P01033 207 aa4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 FGBP02675 491 aa4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 SPINK2P20155 84 aa4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 MCCP23508 829 aa4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 GTF2F1P35269 517 aaKnown RBP eCLIP4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 CD96P40200 585 aa4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 KCNJ6P48051 423 aa4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 CLCN7P51798 805 aa4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 GABPAQ06546 454 aa4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 PPARAQ07869 468 aa4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 BNIP3Q12983 259 aa4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 LRP8Q14114 963 aa4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 SF3A1Q15459 793 aaKnown RBP4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 SHHQ15465 462 aa4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 LARP1BQ659C4 914 aaKnown RBP4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 MFSD6Q6ZSS7 791 aa4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 ARMCX2Q7L311 632 aa4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 PPFIBP1Q86W92 1011 aa4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 IQCA1Q86XH1 822 aa4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 DTX1Q86Y01 620 aa4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 IFNL3Q8IZI9 196 aa4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 GMCL1P1Q8NEA9 526 aa4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 DCAF4Q8WV16 495 aa4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 STAG1Q8WVM7 1258 aa4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 HNRNPLLQ8WVV9 542 aaKnown RBP4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 ESR2Q92731 530 aa4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 TIFAQ96CG3 184 aa4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 EVI5LQ96CN4 794 aa4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 VWCEQ96DN2 955 aa4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 CEP95Q96GE4 821 aa4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 FBXL18Q96ME1 805 aa4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 HSPA12BQ96MM6 686 aa4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 TOX2Q96NM4 488 aa4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 STRBPQ96SI9 672 aaKnown RBP4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 NUP88Q99567 741 aaPredicted RBP4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 KRTAP4-12Q9BQ66 201 aa4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 UBAC1Q9BSL1 405 aa4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 FTOQ9C0B1 505 aaKnown RBP eCLIP4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 PUS7LQ9H0K6 701 aaKnown RBP4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 KAT14Q9H8E8 782 aa4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 RNF146Q9NTX7 359 aa4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 FBXO28Q9NVF7 368 aa4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 MTMR10Q9NXD2 777 aa4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 ACTR10Q9NZ32 417 aa4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 FLRT1Q9NZU1 646 aa4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 ZSWIM5Q9P217 1185 aa4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 PRKAG3Q9UGI9 489 aa4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 FBXL21Q9UKT6 434 aa4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 R3HCC1Q9Y3T6 440 aaKnown RBP4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 ST14Q9Y5Y6 855 aa4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 SLC12A7Q9Y666 1083 aa4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 NAV1Q8NEY1 1877 aa4.38□□□□□ -1.71
HMGN1P11-201ENST00000508668 PTPRFP10586 1907 aa4.37□□□□□ -1.71
HMGN1P11-201ENST00000508668 KIAA1324LA8MWY0 1029 aaPredicted RBP4.37□□□□□ -1.71
HMGN1P11-201ENST00000508668 ZNF213O14771 459 aa4.37□□□□□ -1.71
HMGN1P11-201ENST00000508668 HYAL3O43820 417 aaPredicted RBP4.37□□□□□ -1.71
HMGN1P11-201ENST00000508668 KPNA6O60684 536 aa4.37□□□□□ -1.71
HMGN1P11-201ENST00000508668 ASGR1P07306 291 aa4.37□□□□□ -1.71
HMGN1P11-201ENST00000508668 MYL3P08590 195 aa4.37□□□□□ -1.71
HMGN1P11-201ENST00000508668 TOP1P11387 765 aaKnown RBP4.37□□□□□ -1.71
HMGN1P11-201ENST00000508668 PCP11498 1178 aaKnown RBP4.37□□□□□ -1.71
HMGN1P11-201ENST00000508668 CALML3P27482 149 aa4.37□□□□□ -1.71
HMGN1P11-201ENST00000508668 GUCY1A2P33402 732 aa4.37□□□□□ -1.71
HMGN1P11-201ENST00000508668 NT5C2P49902 561 aa4.37□□□□□ -1.71
HMGN1P11-201ENST00000508668 PMS1P54277 932 aaKnown RBP4.37□□□□□ -1.71
HMGN1P11-201ENST00000508668 PRKCQQ04759 706 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms