RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 MTERF2Q49AM1 385 aa10.55□□□□□ -0.72
NEDD9-211ENST00000508546 XKR3Q5GH77 459 aa10.55□□□□□ -0.72
NEDD9-211ENST00000508546 CATSPER4Q7RTX7 472 aa10.55□□□□□ -0.72
NEDD9-211ENST00000508546 RNF168Q8IYW5 571 aaPredicted RBP10.55□□□□□ -0.72
NEDD9-211ENST00000508546 GPR152Q8TDT2 470 aa10.55□□□□□ -0.72
NEDD9-211ENST00000508546 SMG7Q92540 1137 aaKnown RBP10.55□□□□□ -0.72
NEDD9-211ENST00000508546 SLC5A5Q92911 643 aa10.55□□□□□ -0.72
NEDD9-211ENST00000508546 FAM193BQ96PV7 902 aaPredicted RBP10.55□□□□□ -0.72
NEDD9-211ENST00000508546 TEKT3Q9BXF9 490 aa10.55□□□□□ -0.72
NEDD9-211ENST00000508546 UNC45AQ9H3U1 944 aa10.55□□□□□ -0.72
NEDD9-211ENST00000508546 PLEKHA4Q9H4M7 779 aa10.55□□□□□ -0.72
NEDD9-211ENST00000508546 RSAD1Q9HA92 442 aa10.55□□□□□ -0.72
NEDD9-211ENST00000508546 RXFP1Q9HBX9 757 aa10.55□□□□□ -0.72
NEDD9-211ENST00000508546 ARHGEF3Q9NR81 526 aa10.55□□□□□ -0.72
NEDD9-211ENST00000508546 AGPAT5Q9NUQ2 364 aa10.55□□□□□ -0.72
NEDD9-211ENST00000508546 SUCLA2Q9P2R7 463 aaPredicted RBP10.55□□□□□ -0.72
NEDD9-211ENST00000508546 SEPT9Q9UHD8 586 aaPredicted RBP10.55□□□□□ -0.72
NEDD9-211ENST00000508546 GTF3C3Q9Y5Q9 886 aa10.55□□□□□ -0.72
NEDD9-211ENST00000508546 ARID2Q68CP9 1835 aa10.54□□□□□ -0.72
NEDD9-211ENST00000508546 EDIL3O43854 480 aa10.54□□□□□ -0.72
NEDD9-211ENST00000508546 MAFO75444 373 aaPredicted RBP10.54□□□□□ -0.72
NEDD9-211ENST00000508546 RFPL2O75678 378 aa10.54□□□□□ -0.72
NEDD9-211ENST00000508546 ZIC2O95409 532 aaPredicted RBP10.54□□□□□ -0.72
NEDD9-211ENST00000508546 LAMP2P13473 410 aa10.54□□□□□ -0.72
NEDD9-211ENST00000508546 USP11P51784 963 aa10.54□□□□□ -0.72
NEDD9-211ENST00000508546 AFF1P51825 1210 aaKnown RBP10.54□□□□□ -0.72
NEDD9-211ENST00000508546 AK2P54819 239 aa10.54□□□□□ -0.72
NEDD9-211ENST00000508546 STARD6P59095 220 aa10.54□□□□□ -0.72
NEDD9-211ENST00000508546 HTR4Q13639 388 aa10.54□□□□□ -0.72
NEDD9-211ENST00000508546 ZNF528Q3MIS6 628 aa10.54□□□□□ -0.72
NEDD9-211ENST00000508546 RNF20Q5VTR2 975 aa10.54□□□□□ -0.72
NEDD9-211ENST00000508546 LRCH2Q5VUJ6 765 aa10.54□□□□□ -0.72
NEDD9-211ENST00000508546 RALGAPA1Q6GYQ0 2036 aa10.54□□□□□ -0.72
NEDD9-211ENST00000508546 DCLRE1AQ6PJP8 1040 aa10.54□□□□□ -0.72
NEDD9-211ENST00000508546 DHX32Q7L7V1 743 aaKnown RBP10.54□□□□□ -0.72
NEDD9-211ENST00000508546 RHPN2Q8IUC4 686 aa10.54□□□□□ -0.72
NEDD9-211ENST00000508546 GPR65Q8IYL9 337 aa10.54□□□□□ -0.72
NEDD9-211ENST00000508546 PJA1Q8NG27 643 aa10.54□□□□□ -0.72
NEDD9-211ENST00000508546 BICD2Q8TD16 824 aa10.54□□□□□ -0.72
NEDD9-211ENST00000508546 ZNF707Q96C28 371 aaPredicted RBP10.54□□□□□ -0.72
NEDD9-211ENST00000508546 JPH2Q9BR39 696 aaPredicted RBP10.54□□□□□ -0.72
NEDD9-211ENST00000508546 ESYT1Q9BSJ8 1104 aa10.54□□□□□ -0.72
NEDD9-211ENST00000508546 IFT122Q9HBG6 1241 aa10.54□□□□□ -0.72
NEDD9-211ENST00000508546 MARCH5Q9NX47 278 aa10.54□□□□□ -0.72
NEDD9-211ENST00000508546 ZDHHC7Q9NXF8 308 aa10.54□□□□□ -0.72
NEDD9-211ENST00000508546 ZFP37Q9Y6Q3 630 aaPredicted RBP10.54□□□□□ -0.72
NEDD9-211ENST00000508546 NOTCH4Q99466 2003 aa10.53□□□□□ -0.72
NEDD9-211ENST00000508546 KLF18A0A0U1RQI7 1052 aa10.53□□□□□ -0.72
NEDD9-211ENST00000508546 CCDC196A0A1B0GTZ2 297 aa10.53□□□□□ -0.72
NEDD9-211ENST00000508546 C2CD2LO14523 706 aa10.53□□□□□ -0.72
NEDD9-211ENST00000508546 CHMP2AO43633 222 aa10.53□□□□□ -0.72
NEDD9-211ENST00000508546 LRRN2O75325 713 aa10.53□□□□□ -0.72
NEDD9-211ENST00000508546 PSMD10O75832 226 aa10.53□□□□□ -0.72
NEDD9-211ENST00000508546 PROS1P07225 676 aa10.53□□□□□ -0.72
NEDD9-211ENST00000508546 ADD1P35611 737 aaKnown RBP10.53□□□□□ -0.72
NEDD9-211ENST00000508546 GLUD2P49448 558 aa10.53□□□□□ -0.72
NEDD9-211ENST00000508546 SHC2P98077 582 aa10.53□□□□□ -0.72
NEDD9-211ENST00000508546 DSG1Q02413 1049 aa10.53□□□□□ -0.72
NEDD9-211ENST00000508546 TSGA10IPQ3SY00 556 aa10.53□□□□□ -0.72
NEDD9-211ENST00000508546 B3GNT9Q6UX72 402 aa10.53□□□□□ -0.72
NEDD9-211ENST00000508546 TAS1R1Q7RTX1 841 aa10.53□□□□□ -0.72
NEDD9-211ENST00000508546 MIER3Q7Z3K6 550 aa10.53□□□□□ -0.72
NEDD9-211ENST00000508546 KSR1Q8IVT5 923 aa10.53□□□□□ -0.72
NEDD9-211ENST00000508546 COLGALT2Q8IYK4 626 aa10.53□□□□□ -0.72
NEDD9-211ENST00000508546 CNNM3Q8NE01 707 aa10.53□□□□□ -0.72
NEDD9-211ENST00000508546 NETO1Q8TDF5 533 aa10.53□□□□□ -0.72
NEDD9-211ENST00000508546 SHDQ96IW2 340 aa10.53□□□□□ -0.72
NEDD9-211ENST00000508546 CCDC136Q96JN2 1154 aa10.53□□□□□ -0.72
NEDD9-211ENST00000508546 NLRP4Q96MN2 994 aa10.53□□□□□ -0.72
NEDD9-211ENST00000508546 TCEANC2Q96MN5 208 aa10.53□□□□□ -0.72
NEDD9-211ENST00000508546 FOXQ1Q9C009 403 aa10.53□□□□□ -0.72
NEDD9-211ENST00000508546 NT5C3AQ9H0P0 336 aa10.53□□□□□ -0.72
NEDD9-211ENST00000508546 EPC1Q9H2F5 836 aa10.53□□□□□ -0.72
NEDD9-211ENST00000508546 UBN1Q9NPG3 1134 aa10.53□□□□□ -0.72
NEDD9-211ENST00000508546 FBXO4Q9UKT5 387 aa10.53□□□□□ -0.72
NEDD9-211ENST00000508546 ZMIZ1Q9ULJ6 1067 aa10.53□□□□□ -0.72
NEDD9-211ENST00000508546 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.53□□□□□ -0.72
NEDD9-211ENST00000508546 F5P12259 2224 aa10.52□□□□□ -0.73
NEDD9-211ENST00000508546 TMEM150BA6NC51 233 aa10.52□□□□□ -0.73
NEDD9-211ENST00000508546 PRPF3O43395 683 aaKnown RBP10.52□□□□□ -0.73
NEDD9-211ENST00000508546 POMCP01189 267 aa10.52□□□□□ -0.73
NEDD9-211ENST00000508546 NCLP19338 710 aaKnown RBP10.52□□□□□ -0.73
NEDD9-211ENST00000508546 HOXA11P31270 313 aaPredicted RBP10.52□□□□□ -0.73
NEDD9-211ENST00000508546 DSC1Q08554 894 aa10.52□□□□□ -0.73
NEDD9-211ENST00000508546 UBXN11Q5T124 520 aa10.52□□□□□ -0.73
NEDD9-211ENST00000508546 LILRA6Q6PI73 481 aa10.52□□□□□ -0.73
NEDD9-211ENST00000508546 SRGAP1Q7Z6B7 1085 aa10.52□□□□□ -0.73
NEDD9-211ENST00000508546 SECISBP2LQ93073 1101 aaKnown RBP10.52□□□□□ -0.73
NEDD9-211ENST00000508546 DDX23Q9BUQ8 820 aaKnown RBP10.52□□□□□ -0.73
NEDD9-211ENST00000508546 PRKD2Q9BZL6 878 aa10.52□□□□□ -0.73
NEDD9-211ENST00000508546 PIDD1Q9HB75 910 aa10.52□□□□□ -0.73
NEDD9-211ENST00000508546 ANO2Q9NQ90 1003 aa10.52□□□□□ -0.73
NEDD9-211ENST00000508546 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.52□□□□□ -0.73
NEDD9-211ENST00000508546 CHST7Q9NS84 486 aa10.52□□□□□ -0.73
NEDD9-211ENST00000508546 FNIP2Q9P278 1114 aa10.52□□□□□ -0.73
NEDD9-211ENST00000508546 PRG3Q9Y2Y8 225 aaPredicted RBP10.52□□□□□ -0.73
NEDD9-211ENST00000508546 PCDHGA2Q9Y5H1 932 aa10.52□□□□□ -0.73
NEDD9-211ENST00000508546 COL4A3BPQ9Y5P4 624 aa10.52□□□□□ -0.73
NEDD9-211ENST00000508546 NUMBLQ9Y6R0 609 aa10.52□□□□□ -0.73
NEDD9-211ENST00000508546 NID2Q14112 1375 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms