RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 ABHD15Q6UXT9 468 aa7.39□□□□□ -1.23
TOPBP1-206ENST00000508524 USP51Q70EK9 711 aa7.39□□□□□ -1.23
TOPBP1-206ENST00000508524 ZFPM1Q8IX07 1006 aa7.39□□□□□ -1.23
TOPBP1-206ENST00000508524 LILRA3Q8N6C8 439 aaPredicted RBP7.39□□□□□ -1.23
TOPBP1-206ENST00000508524 PGBD4Q96DM1 585 aa7.39□□□□□ -1.23
TOPBP1-206ENST00000508524 IL17RAQ96F46 866 aa7.39□□□□□ -1.23
TOPBP1-206ENST00000508524 SORCS2Q96PQ0 1159 aa7.39□□□□□ -1.23
TOPBP1-206ENST00000508524 PCED1AQ9H1Q7 454 aa7.39□□□□□ -1.23
TOPBP1-206ENST00000508524 DPP7Q9UHL4 492 aa7.39□□□□□ -1.23
TOPBP1-206ENST00000508524 PRKAB1Q9Y478 270 aa7.39□□□□□ -1.23
TOPBP1-206ENST00000508524 PRAMEF4O60810 478 aa7.38□□□□□ -1.23
TOPBP1-206ENST00000508524 GZMKP49863 264 aa7.38□□□□□ -1.23
TOPBP1-206ENST00000508524 KLF10Q13118 480 aa7.38□□□□□ -1.23
TOPBP1-206ENST00000508524 C19orf54Q5BKX5 351 aa7.38□□□□□ -1.23
TOPBP1-206ENST00000508524 DCAF17Q5H9S7 520 aaPredicted RBP7.38□□□□□ -1.23
TOPBP1-206ENST00000508524 NAIF1Q69YI7 327 aaPredicted RBP7.38□□□□□ -1.23
TOPBP1-206ENST00000508524 IQSEC1Q6DN90 963 aa7.38□□□□□ -1.23
TOPBP1-206ENST00000508524 SNX33Q8WV41 574 aa7.38□□□□□ -1.23
TOPBP1-206ENST00000508524 ORAI2Q96SN7 254 aa7.38□□□□□ -1.23
TOPBP1-206ENST00000508524 LSM14BQ9BX40 385 aaKnown RBP7.38□□□□□ -1.23
TOPBP1-206ENST00000508524 CPEB1Q9BZB8 566 aaKnown RBP7.38□□□□□ -1.23
TOPBP1-206ENST00000508524 GRXCR1A8MXD5 290 aa7.37□□□□□ -1.23
TOPBP1-206ENST00000508524 GOLGA6L6A8MZA4 724 aa7.37□□□□□ -1.23
TOPBP1-206ENST00000508524 GPR39O43194 453 aa7.37□□□□□ -1.23
TOPBP1-206ENST00000508524 GYPEP15421 78 aa7.37□□□□□ -1.23
TOPBP1-206ENST00000508524 HK1P19367 917 aa7.37□□□□□ -1.23
TOPBP1-206ENST00000508524 CTSSP25774 331 aa7.37□□□□□ -1.23
TOPBP1-206ENST00000508524 CNGA1P29973 690 aa7.37□□□□□ -1.23
TOPBP1-206ENST00000508524 ZNF662Q6ZS27 426 aa7.37□□□□□ -1.23
TOPBP1-206ENST00000508524 TSPEARQ8WU66 669 aa7.37□□□□□ -1.23
TOPBP1-206ENST00000508524 TGFBRAP1Q8WUH2 860 aa7.37□□□□□ -1.23
TOPBP1-206ENST00000508524 RAX2Q96IS3 184 aa7.37□□□□□ -1.23
TOPBP1-206ENST00000508524 PDCD2LQ9BRP1 358 aa7.37□□□□□ -1.23
TOPBP1-206ENST00000508524 ING1Q9UK53 422 aaPredicted RBP7.37□□□□□ -1.23
TOPBP1-206ENST00000508524 CPEP16870 476 aa7.36□□□□□ -1.23
TOPBP1-206ENST00000508524 MRPS9P82933 396 aaKnown RBP7.36□□□□□ -1.23
TOPBP1-206ENST00000508524 ABHD18Q0P651 414 aa7.36□□□□□ -1.23
TOPBP1-206ENST00000508524 DOK3Q7L591 496 aa7.36□□□□□ -1.23
TOPBP1-206ENST00000508524 KCNK18Q7Z418 384 aa7.36□□□□□ -1.23
TOPBP1-206ENST00000508524 OR52N2Q8NGI0 321 aa7.36□□□□□ -1.23
TOPBP1-206ENST00000508524 CPPED1Q9BRF8 314 aaPredicted RBP7.36□□□□□ -1.23
TOPBP1-206ENST00000508524 TRPS1Q9UHF7 1281 aa7.36□□□□□ -1.23
TOPBP1-206ENST00000508524 GOLGA8AA7E2F4 631 aa7.35□□□□□ -1.23
TOPBP1-206ENST00000508524 DNAJC6O75061 913 aa7.35□□□□□ -1.23
TOPBP1-206ENST00000508524 PRKD3O94806 890 aa7.35□□□□□ -1.23
TOPBP1-206ENST00000508524 PEX11BO96011 259 aa7.35□□□□□ -1.23
TOPBP1-206ENST00000508524 SCAND1P57086 179 aa7.35□□□□□ -1.23
TOPBP1-206ENST00000508524 SPATS2Q86XZ4 545 aaKnown RBP7.35□□□□□ -1.23
TOPBP1-206ENST00000508524 GLB1L3Q8NCI6 653 aaPredicted RBP7.35□□□□□ -1.23
TOPBP1-206ENST00000508524 WDR66Q8TBY9 1149 aa7.35□□□□□ -1.23
TOPBP1-206ENST00000508524 ZNF483Q8TF39 744 aaPredicted RBP7.35□□□□□ -1.23
TOPBP1-206ENST00000508524 COG1Q8WTW3 980 aa7.35□□□□□ -1.23
TOPBP1-206ENST00000508524 QRSL1Q9H0R6 528 aaKnown RBP7.35□□□□□ -1.23
TOPBP1-206ENST00000508524 EPC1Q9H2F5 836 aa7.35□□□□□ -1.23
TOPBP1-206ENST00000508524 C14orf119Q9NWQ9 140 aa7.35□□□□□ -1.23
TOPBP1-206ENST00000508524 ABCC9O60706 1549 aa7.34□□□□□ -1.23
TOPBP1-206ENST00000508524 ITGA10O75578 1167 aa7.34□□□□□ -1.23
TOPBP1-206ENST00000508524 CDK17Q00537 523 aa7.34□□□□□ -1.23
TOPBP1-206ENST00000508524 MUM1Q2TAK8 710 aa7.34□□□□□ -1.23
TOPBP1-206ENST00000508524 RABL3Q5HYI8 236 aa7.34□□□□□ -1.23
TOPBP1-206ENST00000508524 METTL24Q5JXM2 366 aa7.34□□□□□ -1.23
TOPBP1-206ENST00000508524 GPRIN1Q7Z2K8 1008 aa7.34□□□□□ -1.23
TOPBP1-206ENST00000508524 FAM83AQ86UY5 434 aa7.34□□□□□ -1.23
TOPBP1-206ENST00000508524 AUTS2Q8WXX7 1259 aa7.34□□□□□ -1.23
TOPBP1-206ENST00000508524 PAWRQ96IZ0 340 aaKnown RBP7.34□□□□□ -1.23
TOPBP1-206ENST00000508524 MMRN2Q9H8L6 949 aa7.34□□□□□ -1.23
TOPBP1-206ENST00000508524 SLC2A4RGQ9NR83 387 aa7.34□□□□□ -1.23
TOPBP1-206ENST00000508524 GPRC5DQ9NZD1 345 aa7.34□□□□□ -1.23
TOPBP1-206ENST00000508524 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.34□□□□□ -1.23
TOPBP1-206ENST00000508524 ZMYM3Q14202 1370 aa7.33□□□□□ -1.24
TOPBP1-206ENST00000508524 FAM20BO75063 409 aa7.33□□□□□ -1.24
TOPBP1-206ENST00000508524 CANXP27824 592 aaKnown RBP7.33□□□□□ -1.24
TOPBP1-206ENST00000508524 MCM7P33993 719 aa7.33□□□□□ -1.24
TOPBP1-206ENST00000508524 GPR3P46089 330 aa7.33□□□□□ -1.24
TOPBP1-206ENST00000508524 CCT2P78371 535 aaKnown RBP7.33□□□□□ -1.24
TOPBP1-206ENST00000508524 APBA1Q02410 837 aa7.33□□□□□ -1.24
TOPBP1-206ENST00000508524 FAPQ12884 760 aa7.33□□□□□ -1.24
TOPBP1-206ENST00000508524 MST1LQ2TV78 715 aa7.33□□□□□ -1.24
TOPBP1-206ENST00000508524 XYLT1Q86Y38 959 aa7.33□□□□□ -1.24
TOPBP1-206ENST00000508524 ZNF480Q8WV37 535 aa7.33□□□□□ -1.24
TOPBP1-206ENST00000508524 AHCYL2Q96HN2 611 aaKnown RBP7.33□□□□□ -1.24
TOPBP1-206ENST00000508524 TMX1Q9H3N1 280 aa7.33□□□□□ -1.24
TOPBP1-206ENST00000508524 GPRC5BQ9NZH0 403 aa7.33□□□□□ -1.24
TOPBP1-206ENST00000508524 SCOCQ9UIL1 159 aa7.33□□□□□ -1.24
TOPBP1-206ENST00000508524 RPTORQ8N122 1335 aa7.32□□□□□ -1.24
TOPBP1-206ENST00000508524 ADCY6O43306 1168 aa7.32□□□□□ -1.24
TOPBP1-206ENST00000508524 GASTP01350 101 aa7.32□□□□□ -1.24
TOPBP1-206ENST00000508524 PTTG1IPP53801 180 aa7.32□□□□□ -1.24
TOPBP1-206ENST00000508524 ERVK-21P61565 698 aa7.32□□□□□ -1.24
TOPBP1-206ENST00000508524 SRSF2Q01130 221 aaKnown RBP7.32□□□□□ -1.24
TOPBP1-206ENST00000508524 VPS72Q15906 364 aa7.32□□□□□ -1.24
TOPBP1-206ENST00000508524 ADRM1Q16186 407 aa7.32□□□□□ -1.24
TOPBP1-206ENST00000508524 CSRP2Q16527 193 aa7.32□□□□□ -1.24
TOPBP1-206ENST00000508524 RNF219Q5W0B1 726 aaPredicted RBP7.32□□□□□ -1.24
TOPBP1-206ENST00000508524 BTNL9Q6UXG8 535 aa7.32□□□□□ -1.24
TOPBP1-206ENST00000508524 MDM1Q8TC05 714 aa7.32□□□□□ -1.24
TOPBP1-206ENST00000508524 CDC5LQ99459 802 aaKnown RBP7.32□□□□□ -1.24
TOPBP1-206ENST00000508524 MRIQ9BWK5 157 aa7.32□□□□□ -1.24
TOPBP1-206ENST00000508524 IFT122Q9HBG6 1241 aa7.32□□□□□ -1.24
TOPBP1-206ENST00000508524 CCM2LQ9NUG4 571 aaPredicted RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms