RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 CNOT8Q9UFF9 292 aaKnown RBP5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 PCYOX1Q9UHG3 505 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 BAIAP2L1Q9UHR4 511 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 PNMA2Q9UL42 364 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 FRMD4BQ9Y2L6 1034 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 USP15Q9Y4E8 981 aaPredicted RBP5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 STRCP1A6NGW2 1772 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 SNED1Q8TER0 1413 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 BAZ2BQ9UIF8 2168 aaKnown RBP5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 TLDC2A0PJX2 215 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 E7ENQ6 273 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 E9PMD0 336 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 F8W031 263 aaPredicted RBP5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 DDX3XO00571 662 aaKnown RBP eCLIP5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 PPP1R12AO14974 1030 aaPredicted RBP5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 KIAA0391O15091 583 aaKnown RBP5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 P4HA2O15460 535 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 DDX3YO15523 660 aaKnown RBP5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 CAND2O75155 1236 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 ATP2C2O75185 946 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 ITGA4P13612 1032 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 ALADP13716 330 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 NQO1P15559 274 aaKnown RBP5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 SLC9A1P19634 815 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 MUTP22033 750 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 ATP2B4P23634 1241 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 RPA1P27694 616 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 PLTPP55058 493 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 SATB1Q01826 763 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 PPATQ06203 517 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 KLRC3Q07444 240 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 CCDC15Q0P6D6 951 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 NR1H3Q13133 447 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 ITPK1Q13572 414 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 ALCAMQ13740 583 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 GIT2Q14161 759 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 MYBPC2Q14324 1141 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 PLS1Q14651 629 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 KIF22Q14807 665 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 NAA25Q14CX7 972 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 NR6A1Q15406 480 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 TRADDQ15628 312 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 SLC15A2Q16348 729 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 Q4G0T1 1027 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 TLDC1Q6P9B6 456 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 PPP1R21Q6ZMI0 780 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 ARHGEF18Q6ZSZ5 1173 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 FAM186BQ8IYM0 893 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 TEX9Q8N6V9 391 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 BBOF1Q8ND07 529 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 SLC30A5Q8TAD4 765 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 SLC35G2Q8TBE7 412 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 FBF1Q8TES7 1133 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 ATP8B4Q8TF62 1192 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 SLC35C1Q96A29 364 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 COA7Q96BR5 231 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 CCDC17Q96LX7 622 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 CCDC77Q9BR77 488 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 POLR3CQ9BUI4 534 aaPredicted RBP5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 RTFDC1Q9BY42 306 aaPredicted RBP5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 FOXP3Q9BZS1 431 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 UBA5Q9GZZ9 404 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 NEUROG2Q9H2A3 272 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 AZI2Q9H6S1 392 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 TXLNGQ9NUQ3 528 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 NKIRAS1Q9NYS0 192 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 KCND2Q9NZV8 630 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 TBC1D7Q9P0N9 293 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 WHRNQ9P202 907 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 NARFQ9UHQ1 456 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 SAP30BPQ9UHR5 308 aaKnown RBP5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 FKBPLQ9UIM3 349 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 C15orf41Q9Y2V0 281 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 ARL2BPQ9Y2Y0 163 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 SUGT1Q9Y2Z0 365 aa5.34□□□□□ -1.55
HMGB3P16-201ENST00000508037 DOT1LQ8TEK3 1739 aa5.34□□□□□ -1.56
HMGB3P16-201ENST00000508037 ZNF831Q5JPB2 1677 aa5.34□□□□□ -1.56
HMGB3P16-201ENST00000508037 GAKO14976 1311 aa5.33□□□□□ -1.56
HMGB3P16-201ENST00000508037 IRS2Q9Y4H2 1338 aa5.33□□□□□ -1.56
HMGB3P16-201ENST00000508037 IGKV6D-41A0A0C4DH26 115 aa5.33□□□□□ -1.56
HMGB3P16-201ENST00000508037 POTECB2RU33 542 aa5.33□□□□□ -1.56
HMGB3P16-201ENST00000508037 ABLIM1O14639 778 aa5.33□□□□□ -1.56
HMGB3P16-201ENST00000508037 NKRFO15226 690 aaKnown RBP eCLIP5.33□□□□□ -1.56
HMGB3P16-201ENST00000508037 CAPN5O15484 640 aaPredicted RBP5.33□□□□□ -1.56
HMGB3P16-201ENST00000508037 SNX3O60493 162 aa5.33□□□□□ -1.56
HMGB3P16-201ENST00000508037 HNRNPCL1O60812 293 aaKnown RBP5.33□□□□□ -1.56
HMGB3P16-201ENST00000508037 TCEA3O75764 348 aa5.33□□□□□ -1.56
HMGB3P16-201ENST00000508037 AKAP3O75969 853 aa5.33□□□□□ -1.56
HMGB3P16-201ENST00000508037 MTA2O94776 668 aa5.33□□□□□ -1.56
HMGB3P16-201ENST00000508037 FAM13AO94988 1023 aa5.33□□□□□ -1.56
HMGB3P16-201ENST00000508037 GCNT3O95395 438 aa5.33□□□□□ -1.56
HMGB3P16-201ENST00000508037 EYA4O95677 639 aa5.33□□□□□ -1.56
HMGB3P16-201ENST00000508037 ADH1CP00326 375 aa5.33□□□□□ -1.56
HMGB3P16-201ENST00000508037 HLA-DOAP06340 250 aa5.33□□□□□ -1.56
HMGB3P16-201ENST00000508037 CLTAP09496 248 aa5.33□□□□□ -1.56
HMGB3P16-201ENST00000508037 ACTN1P12814 892 aa5.33□□□□□ -1.56
HMGB3P16-201ENST00000508037 ALAS1P13196 640 aa5.33□□□□□ -1.56
HMGB3P16-201ENST00000508037 VCAM1P19320 739 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms