RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 EPN3Q9H201 632 aa7.92□□□□□ -1.14
CLCN3-206ENST00000507875 FRMPD2Q68DX3 1309 aaPredicted RBP7.92□□□□□ -1.14
CLCN3-206ENST00000507875 PHIPQ8WWQ0 1821 aa7.91□□□□□ -1.14
CLCN3-206ENST00000507875 TCRBV16S1A1N1A0A5B0 115 aa7.91□□□□□ -1.14
CLCN3-206ENST00000507875 TCP10L2B9ZVM9 353 aa7.91□□□□□ -1.14
CLCN3-206ENST00000507875 FIBPO43427 364 aa7.91□□□□□ -1.14
CLCN3-206ENST00000507875 BRINP1O60477 761 aa7.91□□□□□ -1.14
CLCN3-206ENST00000507875 AKR1B1P15121 316 aa7.91□□□□□ -1.14
CLCN3-206ENST00000507875 SLC19A1P41440 591 aa7.91□□□□□ -1.14
CLCN3-206ENST00000507875 ZNF267Q14586 743 aaPredicted RBP7.91□□□□□ -1.14
CLCN3-206ENST00000507875 LRRC14Q15048 493 aa7.91□□□□□ -1.14
CLCN3-206ENST00000507875 SAFBQ15424 915 aaKnown RBP eCLIP7.91□□□□□ -1.14
CLCN3-206ENST00000507875 PLA2G4EQ3MJ16 856 aa7.91□□□□□ -1.14
CLCN3-206ENST00000507875 SUPT20HL1Q3ZLR7 823 aa7.91□□□□□ -1.14
CLCN3-206ENST00000507875 CDCA2Q69YH5 1023 aaPredicted RBP7.91□□□□□ -1.14
CLCN3-206ENST00000507875 GALNT17Q6IS24 598 aa7.91□□□□□ -1.14
CLCN3-206ENST00000507875 BTN2A2Q8WVV5 523 aa7.91□□□□□ -1.14
CLCN3-206ENST00000507875 DCPSQ96C86 337 aaKnown RBP7.91□□□□□ -1.14
CLCN3-206ENST00000507875 SLX1AQ9BQ83 275 aa7.91□□□□□ -1.14
CLCN3-206ENST00000507875 RANBP17Q9H2T7 1088 aaKnown RBP7.91□□□□□ -1.14
CLCN3-206ENST00000507875 RMI1Q9H9A7 625 aa7.91□□□□□ -1.14
CLCN3-206ENST00000507875 SAGE1Q9NXZ1 904 aa7.91□□□□□ -1.14
CLCN3-206ENST00000507875 PHTF1Q9UMS5 762 aa7.91□□□□□ -1.14
CLCN3-206ENST00000507875 SOX13Q9UN79 622 aa7.91□□□□□ -1.14
CLCN3-206ENST00000507875 PCDHA9Q9Y5H5 950 aa7.91□□□□□ -1.14
CLCN3-206ENST00000507875 POLR2AP24928 1970 aaKnown RBP7.91□□□□□ -1.14
CLCN3-206ENST00000507875 DLX3O60479 287 aa7.91□□□□□ -1.14
CLCN3-206ENST00000507875 MAP3K6O95382 1288 aa7.91□□□□□ -1.14
CLCN3-206ENST00000507875 CRTAMO95727 393 aa7.91□□□□□ -1.14
CLCN3-206ENST00000507875 PARP1P09874 1014 aaKnown RBP7.91□□□□□ -1.14
CLCN3-206ENST00000507875 FXR1P51114 621 aaKnown RBP eCLIP7.91□□□□□ -1.14
CLCN3-206ENST00000507875 TCP10Q12799 353 aa7.91□□□□□ -1.14
CLCN3-206ENST00000507875 ZC3H12BQ5HYM0 836 aaKnown RBP7.91□□□□□ -1.14
CLCN3-206ENST00000507875 IQSEC1Q6DN90 963 aa7.91□□□□□ -1.14
CLCN3-206ENST00000507875 ZFPM1Q8IX07 1006 aa7.91□□□□□ -1.14
CLCN3-206ENST00000507875 CPA6Q8N4T0 437 aa7.91□□□□□ -1.14
CLCN3-206ENST00000507875 SLC44A5Q8NCS7 719 aa7.91□□□□□ -1.14
CLCN3-206ENST00000507875 FBXO18Q8NFZ0 1043 aa7.91□□□□□ -1.14
CLCN3-206ENST00000507875 SNRNP27Q8WVK2 155 aaKnown RBP7.91□□□□□ -1.14
CLCN3-206ENST00000507875 ITFG2Q969R8 447 aa7.91□□□□□ -1.14
CLCN3-206ENST00000507875 CEP95Q96GE4 821 aa7.91□□□□□ -1.14
CLCN3-206ENST00000507875 C8orf76Q96K31 380 aa7.91□□□□□ -1.14
CLCN3-206ENST00000507875 ZNF341Q9BYN7 854 aa7.91□□□□□ -1.14
CLCN3-206ENST00000507875 VEZTQ9HBM0 779 aa7.91□□□□□ -1.14
CLCN3-206ENST00000507875 PLCB1Q9NQ66 1216 aa7.91□□□□□ -1.14
CLCN3-206ENST00000507875 H2AFY2Q9P0M6 372 aaPredicted RBP7.91□□□□□ -1.14
CLCN3-206ENST00000507875 DACH1Q9UI36 760 aa7.91□□□□□ -1.14
CLCN3-206ENST00000507875 NOL7Q9UMY1 257 aaKnown RBP7.91□□□□□ -1.14
CLCN3-206ENST00000507875 SAMM50Q9Y512 469 aa7.91□□□□□ -1.14
CLCN3-206ENST00000507875 PCDHAC2Q9Y5I4 1007 aa7.91□□□□□ -1.14
CLCN3-206ENST00000507875 MORC2Q9Y6X9 1032 aaPredicted RBP7.91□□□□□ -1.14
CLCN3-206ENST00000507875 E2F8A0AVK6 867 aa7.9□□□□□ -1.14
CLCN3-206ENST00000507875 CLRN2A0PK11 232 aa7.9□□□□□ -1.14
CLCN3-206ENST00000507875 TRIM64CA6NLI5 447 aa7.9□□□□□ -1.14
CLCN3-206ENST00000507875 AGRPO00253 132 aa7.9□□□□□ -1.14
CLCN3-206ENST00000507875 PCDHGA12O60330 932 aa7.9□□□□□ -1.14
CLCN3-206ENST00000507875 CTNND1O60716 968 aaKnown RBP7.9□□□□□ -1.14
CLCN3-206ENST00000507875 PLA2G6O60733 806 aa7.9□□□□□ -1.14
CLCN3-206ENST00000507875 PPFIA3O75145 1194 aa7.9□□□□□ -1.14
CLCN3-206ENST00000507875 ASNSP08243 561 aa7.9□□□□□ -1.14
CLCN3-206ENST00000507875 FDPSP14324 419 aaKnown RBP7.9□□□□□ -1.14
CLCN3-206ENST00000507875 EIF2AK2P19525 551 aaKnown RBP7.9□□□□□ -1.14
CLCN3-206ENST00000507875 EPHA1P21709 976 aa7.9□□□□□ -1.14
CLCN3-206ENST00000507875 CLK1P49759 484 aaKnown RBP7.9□□□□□ -1.14
CLCN3-206ENST00000507875 KRT85P78386 507 aa7.9□□□□□ -1.14
CLCN3-206ENST00000507875 IFT88Q13099 833 aa7.9□□□□□ -1.14
CLCN3-206ENST00000507875 INAVAQ3KP66 663 aa7.9□□□□□ -1.14
CLCN3-206ENST00000507875 SAMD5Q5TGI4 173 aa7.9□□□□□ -1.14
CLCN3-206ENST00000507875 CCDC12Q8WUD4 166 aaPredicted RBP7.9□□□□□ -1.14
CLCN3-206ENST00000507875 NUP133Q8WUM0 1156 aa7.9□□□□□ -1.14
CLCN3-206ENST00000507875 CCDC34Q96HJ3 373 aa7.9□□□□□ -1.14
CLCN3-206ENST00000507875 GMCL1Q96IK5 515 aa7.9□□□□□ -1.14
CLCN3-206ENST00000507875 ZNF396Q96N95 335 aaPredicted RBP7.9□□□□□ -1.14
CLCN3-206ENST00000507875 SMOC1Q9H4F8 434 aa7.9□□□□□ -1.14
CLCN3-206ENST00000507875 DNAJC18Q9H819 358 aa7.9□□□□□ -1.14
CLCN3-206ENST00000507875 SENP2Q9HC62 589 aa7.9□□□□□ -1.14
CLCN3-206ENST00000507875 NGRNQ9NPE2 291 aaKnown RBP7.9□□□□□ -1.14
CLCN3-206ENST00000507875 RRAGDQ9NQL2 400 aaPredicted RBP7.9□□□□□ -1.14
CLCN3-206ENST00000507875 ZNF112Q9UJU3 913 aa7.9□□□□□ -1.14
CLCN3-206ENST00000507875 PCDHGA9Q9Y5G4 932 aaKnown RBP7.9□□□□□ -1.14
CLCN3-206ENST00000507875 PCDHGA8Q9Y5G5 932 aa7.9□□□□□ -1.14
CLCN3-206ENST00000507875 PCDHGA7Q9Y5G6 932 aa7.9□□□□□ -1.14
CLCN3-206ENST00000507875 PCDHGA6Q9Y5G7 932 aa7.9□□□□□ -1.14
CLCN3-206ENST00000507875 PCDHGA3Q9Y5H0 932 aa7.9□□□□□ -1.14
CLCN3-206ENST00000507875 PCDHGA2Q9Y5H1 932 aa7.9□□□□□ -1.14
CLCN3-206ENST00000507875 ATXN7O15265 892 aaPredicted RBP7.9□□□□□ -1.15
CLCN3-206ENST00000507875 JAK2O60674 1132 aa7.9□□□□□ -1.15
CLCN3-206ENST00000507875 MTA2O94776 668 aa7.9□□□□□ -1.15
CLCN3-206ENST00000507875 LETM1O95202 739 aaPredicted RBP7.9□□□□□ -1.15
CLCN3-206ENST00000507875 SMPD1P17405 629 aa7.9□□□□□ -1.15
CLCN3-206ENST00000507875 PAX7P23759 505 aa7.9□□□□□ -1.15
CLCN3-206ENST00000507875 GRIK1P39086 918 aa7.9□□□□□ -1.15
CLCN3-206ENST00000507875 HLTFQ14527 1009 aaKnown RBP eCLIP7.9□□□□□ -1.15
CLCN3-206ENST00000507875 CCDC183Q5T5S1 534 aa7.9□□□□□ -1.15
CLCN3-206ENST00000507875 SPRYD7Q5W111 196 aa7.9□□□□□ -1.15
CLCN3-206ENST00000507875 MCTP2Q6DN12 878 aa7.9□□□□□ -1.15
CLCN3-206ENST00000507875 PDXDC1Q6P996 788 aa7.9□□□□□ -1.15
CLCN3-206ENST00000507875 C1orf228Q6PIY5 440 aa7.9□□□□□ -1.15
CLCN3-206ENST00000507875 STK11IPQ8N1F8 1099 aa7.9□□□□□ -1.15
CLCN3-206ENST00000507875 UHMK1Q8TAS1 419 aaKnown RBP7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms