RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 CCL23P55773 120 aa15.54■□□□□ 0.08
RNF4-208ENST00000507247 IQCB1Q15051 598 aa15.54■□□□□ 0.08
RNF4-208ENST00000507247 ATF7IP2Q5U623 682 aa15.54■□□□□ 0.08
RNF4-208ENST00000507247 EEF1DP3Q658K8 133 aa15.54■□□□□ 0.08
RNF4-208ENST00000507247 TSHZ1Q6ZSZ6 1077 aa15.54■□□□□ 0.08
RNF4-208ENST00000507247 DHX40Q8IX18 779 aaKnown RBP15.54■□□□□ 0.08
RNF4-208ENST00000507247 AOPEPQ8N6M6 819 aa15.54■□□□□ 0.08
RNF4-208ENST00000507247 SCLYQ96I15 445 aa15.54■□□□□ 0.08
RNF4-208ENST00000507247 BPIFA3Q9BQP9 254 aa15.54■□□□□ 0.08
RNF4-208ENST00000507247 PTPRHQ9HD43 1115 aa15.54■□□□□ 0.08
RNF4-208ENST00000507247 ERVK-5Q9HDB9 667 aa15.54■□□□□ 0.08
RNF4-208ENST00000507247 PRDM5Q9NQX1 630 aaPredicted RBP15.54■□□□□ 0.08
RNF4-208ENST00000507247 AGPAT5Q9NUQ2 364 aa15.54■□□□□ 0.08
RNF4-208ENST00000507247 ST3GAL5Q9UNP4 418 aa15.54■□□□□ 0.08
RNF4-208ENST00000507247 SQORQ9Y6N5 450 aa15.54■□□□□ 0.08
RNF4-208ENST00000507247 BICDL2A1A5D9 508 aa15.53■□□□□ 0.08
RNF4-208ENST00000507247 CALUO43852 315 aaPredicted RBP15.53■□□□□ 0.08
RNF4-208ENST00000507247 PROZP22891 400 aa15.53■□□□□ 0.08
RNF4-208ENST00000507247 LRRC63Q05C16 580 aa15.53■□□□□ 0.08
RNF4-208ENST00000507247 NCAPHQ15003 741 aa15.53■□□□□ 0.08
RNF4-208ENST00000507247 PCBP1Q15365 356 aaKnown RBP eCLIP15.53■□□□□ 0.08
RNF4-208ENST00000507247 EDRF1Q3B7T1 1238 aa15.53■□□□□ 0.08
RNF4-208ENST00000507247 FOXR2Q6PJQ5 311 aa15.53■□□□□ 0.08
RNF4-208ENST00000507247 ZPBP2Q6X784 338 aa15.53■□□□□ 0.08
RNF4-208ENST00000507247 HS2ST1Q7LGA3 356 aa15.53■□□□□ 0.08
RNF4-208ENST00000507247 ZSWIM2Q8NEG5 633 aa15.53■□□□□ 0.08
RNF4-208ENST00000507247 ENOX1Q8TC92 643 aaKnown RBP15.53■□□□□ 0.08
RNF4-208ENST00000507247 TSG101Q99816 390 aa15.53■□□□□ 0.08
RNF4-208ENST00000507247 CBWD1Q9BRT8 395 aa15.53■□□□□ 0.08
RNF4-208ENST00000507247 NAT10Q9H0A0 1025 aaKnown RBP15.53■□□□□ 0.08
RNF4-208ENST00000507247 PDZD7Q9H5P4 517 aa15.53■□□□□ 0.08
RNF4-208ENST00000507247 PADI3Q9ULW8 664 aa15.53■□□□□ 0.08
RNF4-208ENST00000507247 TNFSF13BQ9Y275 285 aa15.53■□□□□ 0.08
RNF4-208ENST00000507247 STYXL1Q9Y6J8 313 aa15.53■□□□□ 0.08
RNF4-208ENST00000507247 DNAH12Q6ZR08 3092 aa15.53■□□□□ 0.08
RNF4-208ENST00000507247 A0A1B0GUA9 196 aa15.52■□□□□ 0.08
RNF4-208ENST00000507247 TOM1L1O75674 476 aa15.52■□□□□ 0.08
RNF4-208ENST00000507247 NR3C1P04150 777 aa15.52■□□□□ 0.08
RNF4-208ENST00000507247 NFX1Q12986 1120 aaKnown RBP15.52■□□□□ 0.08
RNF4-208ENST00000507247 PAK2Q13177 524 aa15.52■□□□□ 0.08
RNF4-208ENST00000507247 NFIL3Q16649 462 aa15.52■□□□□ 0.08
RNF4-208ENST00000507247 TMEM132AQ24JP5 1023 aa15.52■□□□□ 0.08
RNF4-208ENST00000507247 ARMCX5Q6P1M9 558 aa15.52■□□□□ 0.08
RNF4-208ENST00000507247 LRRC55Q6ZSA7 311 aa15.52■□□□□ 0.08
RNF4-208ENST00000507247 LUZP1Q86V48 1076 aa15.52■□□□□ 0.08
RNF4-208ENST00000507247 C12orf56Q8IXR9 622 aa15.52■□□□□ 0.08
RNF4-208ENST00000507247 ZC3H3Q8IXZ2 948 aaKnown RBP15.52■□□□□ 0.08
RNF4-208ENST00000507247 C7orf61Q8IZ16 206 aa15.52■□□□□ 0.08
RNF4-208ENST00000507247 USP38Q8NB14 1042 aa15.52■□□□□ 0.08
RNF4-208ENST00000507247 FAM200AQ8TCP9 573 aa15.52■□□□□ 0.08
RNF4-208ENST00000507247 EEF2KMTQ96G04 330 aa15.52■□□□□ 0.08
RNF4-208ENST00000507247 TMX1Q9H3N1 280 aa15.52■□□□□ 0.08
RNF4-208ENST00000507247 PCIF1Q9H4Z3 704 aa15.52■□□□□ 0.08
RNF4-208ENST00000507247 DMAC2Q9NW81 257 aa15.52■□□□□ 0.08
RNF4-208ENST00000507247 CGNQ9P2M7 1197 aaKnown RBP15.52■□□□□ 0.08
RNF4-208ENST00000507247 ANKFY1Q9P2R3 1169 aa15.52■□□□□ 0.08
RNF4-208ENST00000507247 PIN4Q9Y237 131 aaKnown RBP15.52■□□□□ 0.08
RNF4-208ENST00000507247 ANK1P16157 1881 aa15.52■□□□□ 0.07
RNF4-208ENST00000507247 N4BP3O15049 544 aa15.51■□□□□ 0.07
RNF4-208ENST00000507247 GPR182O15218 404 aa15.51■□□□□ 0.07
RNF4-208ENST00000507247 MGEA5O60502 916 aa15.51■□□□□ 0.07
RNF4-208ENST00000507247 CAVIN2O95810 425 aa15.51■□□□□ 0.07
RNF4-208ENST00000507247 TIMP1P01033 207 aa15.51■□□□□ 0.07
RNF4-208ENST00000507247 GARTP22102 1010 aa15.51■□□□□ 0.07
RNF4-208ENST00000507247 NR2F2P24468 414 aa15.51■□□□□ 0.07
RNF4-208ENST00000507247 AXLP30530 894 aa15.51■□□□□ 0.07
RNF4-208ENST00000507247 CYP2J2P51589 502 aa15.51■□□□□ 0.07
RNF4-208ENST00000507247 SNRPFP62306 86 aaKnown RBP15.51■□□□□ 0.07
RNF4-208ENST00000507247 MYL5Q02045 173 aa15.51■□□□□ 0.07
RNF4-208ENST00000507247 TCTN1Q2MV58 587 aa15.51■□□□□ 0.07
RNF4-208ENST00000507247 ZNF568Q3ZCX4 644 aa15.51■□□□□ 0.07
RNF4-208ENST00000507247 SPATA1Q5VX52 437 aa15.51■□□□□ 0.07
RNF4-208ENST00000507247 NOTUMQ6P988 496 aa15.51■□□□□ 0.07
RNF4-208ENST00000507247 MPZL3Q6UWV2 235 aa15.51■□□□□ 0.07
RNF4-208ENST00000507247 ZBTB33Q86T24 672 aa15.51■□□□□ 0.07
RNF4-208ENST00000507247 RNF214Q8ND24 703 aa15.51■□□□□ 0.07
RNF4-208ENST00000507247 GOLGA5Q8TBA6 731 aa15.51■□□□□ 0.07
RNF4-208ENST00000507247 POMGNT1Q8WZA1 660 aa15.51■□□□□ 0.07
RNF4-208ENST00000507247 VWCEQ96DN2 955 aa15.51■□□□□ 0.07
RNF4-208ENST00000507247 RBSNQ9H1K0 784 aa15.51■□□□□ 0.07
RNF4-208ENST00000507247 CDT1Q9H211 546 aa15.51■□□□□ 0.07
RNF4-208ENST00000507247 HSD3B7Q9H2F3 369 aa15.51■□□□□ 0.07
RNF4-208ENST00000507247 HSPBP1Q9NZL4 362 aa15.51■□□□□ 0.07
RNF4-208ENST00000507247 NFE2L3Q9Y4A8 694 aa15.51■□□□□ 0.07
RNF4-208ENST00000507247 MICAL3Q7RTP6 2002 aa15.51■□□□□ 0.07
RNF4-208ENST00000507247 A0A0B4J269 797 aa15.5■□□□□ 0.07
RNF4-208ENST00000507247 IKBKBO14920 756 aa15.5■□□□□ 0.07
RNF4-208ENST00000507247 CXCL10P02778 98 aa15.5■□□□□ 0.07
RNF4-208ENST00000507247 HARSP12081 509 aaKnown RBP15.5■□□□□ 0.07
RNF4-208ENST00000507247 MATR3P43243 847 aaKnown RBP eCLIP15.5■□□□□ 0.07
RNF4-208ENST00000507247 CASP4P49662 377 aa15.5■□□□□ 0.07
RNF4-208ENST00000507247 FKBP3Q00688 224 aaKnown RBP15.5■□□□□ 0.07
RNF4-208ENST00000507247 MCL1Q07820 350 aa15.5■□□□□ 0.07
RNF4-208ENST00000507247 DSC3Q14574 896 aa15.5■□□□□ 0.07
RNF4-208ENST00000507247 NOLC1Q14978 699 aaKnown RBP eCLIP15.5■□□□□ 0.07
RNF4-208ENST00000507247 PLEKHG4Q58EX7 1191 aa15.5■□□□□ 0.07
RNF4-208ENST00000507247 UBXN11Q5T124 520 aa15.5■□□□□ 0.07
RNF4-208ENST00000507247 SLFN12LQ6IEE8 588 aa15.5■□□□□ 0.07
RNF4-208ENST00000507247 SLC9A9Q8IVB4 645 aa15.5■□□□□ 0.07
RNF4-208ENST00000507247 CSGALNACT2Q8N6G5 542 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms