RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 CKAP2LQ8IYA6 745 aa8.21□□□□□ -1.1
VCAN-207ENST00000507162 SPEM1Q8N4L4 309 aa8.21□□□□□ -1.1
VCAN-207ENST00000507162 ENAHQ8N8S7 591 aaPredicted RBP8.21□□□□□ -1.1
VCAN-207ENST00000507162 DEFB124Q8NES8 71 aa8.21□□□□□ -1.1
VCAN-207ENST00000507162 URGCPQ8TCY9 931 aa8.21□□□□□ -1.1
VCAN-207ENST00000507162 ING5Q8WYH8 240 aa8.21□□□□□ -1.1
VCAN-207ENST00000507162 LOXL4Q96JB6 756 aa8.21□□□□□ -1.1
VCAN-207ENST00000507162 SDF4Q9BRK5 362 aa8.21□□□□□ -1.1
VCAN-207ENST00000507162 IER2Q9BTL4 223 aa8.21□□□□□ -1.1
VCAN-207ENST00000507162 BRD9Q9H8M2 597 aa8.21□□□□□ -1.1
VCAN-207ENST00000507162 VPS45Q9NRW7 570 aa8.21□□□□□ -1.1
VCAN-207ENST00000507162 IGSF5Q9NSI5 407 aa8.21□□□□□ -1.1
VCAN-207ENST00000507162 PRG3Q9Y2Y8 225 aaPredicted RBP8.21□□□□□ -1.1
VCAN-207ENST00000507162 NEDD4P46934 1319 aa8.21□□□□□ -1.1
VCAN-207ENST00000507162 APC2O95996 2303 aa8.2□□□□□ -1.1
VCAN-207ENST00000507162 PCNX2A6NKB5 2137 aa8.2□□□□□ -1.1
VCAN-207ENST00000507162 SPAG17Q6Q759 2223 aa8.2□□□□□ -1.1
VCAN-207ENST00000507162 K7ESF4 209 aa8.2□□□□□ -1.1
VCAN-207ENST00000507162 CCDC192P0DO97 292 aa8.2□□□□□ -1.1
VCAN-207ENST00000507162 PCP11498 1178 aaKnown RBP8.2□□□□□ -1.1
VCAN-207ENST00000507162 RPL17P18621 184 aaKnown RBP8.2□□□□□ -1.1
VCAN-207ENST00000507162 RAP1GAPP47736 663 aa8.2□□□□□ -1.1
VCAN-207ENST00000507162 OR1G1P47890 313 aa8.2□□□□□ -1.1
VCAN-207ENST00000507162 PXNP49023 591 aaPredicted RBP8.2□□□□□ -1.1
VCAN-207ENST00000507162 FGD1P98174 961 aa8.2□□□□□ -1.1
VCAN-207ENST00000507162 GAS6Q14393 721 aa8.2□□□□□ -1.1
VCAN-207ENST00000507162 GRM2Q14416 872 aa8.2□□□□□ -1.1
VCAN-207ENST00000507162 PLA2G2CQ5R387 149 aa8.2□□□□□ -1.1
VCAN-207ENST00000507162 PPM1LQ5SGD2 360 aa8.2□□□□□ -1.1
VCAN-207ENST00000507162 FAM160B1Q5W0V3 765 aa8.2□□□□□ -1.1
VCAN-207ENST00000507162 TWF2Q6IBS0 349 aaKnown RBP8.2□□□□□ -1.1
VCAN-207ENST00000507162 TANGO2Q6ICL3 276 aa8.2□□□□□ -1.1
VCAN-207ENST00000507162 EFCAB12Q6NXP0 572 aa8.2□□□□□ -1.1
VCAN-207ENST00000507162 PDXDC2PQ6P474 469 aa8.2□□□□□ -1.1
VCAN-207ENST00000507162 WDR5BQ86VZ2 330 aa8.2□□□□□ -1.1
VCAN-207ENST00000507162 ZNF687Q8N1G0 1237 aa8.2□□□□□ -1.1
VCAN-207ENST00000507162 SPOCK2Q92563 424 aa8.2□□□□□ -1.1
VCAN-207ENST00000507162 B3GALT6Q96L58 329 aa8.2□□□□□ -1.1
VCAN-207ENST00000507162 MAP7D2Q96T17 732 aa8.2□□□□□ -1.1
VCAN-207ENST00000507162 HNRNPABQ99729 332 aaKnown RBP8.2□□□□□ -1.1
VCAN-207ENST00000507162 HERC2P3Q9BVR0 1158 aa8.2□□□□□ -1.1
VCAN-207ENST00000507162 RXFP1Q9HBX9 757 aa8.2□□□□□ -1.1
VCAN-207ENST00000507162 JADE2Q9NQC1 790 aa8.2□□□□□ -1.1
VCAN-207ENST00000507162 RBM12Q9NTZ6 932 aaKnown RBP8.2□□□□□ -1.1
VCAN-207ENST00000507162 MAD2L2Q9UI95 211 aa8.2□□□□□ -1.1
VCAN-207ENST00000507162 UBIAD1Q9Y5Z9 338 aa8.2□□□□□ -1.1
VCAN-207ENST00000507162 B4E1Z4 1266 aa8.19□□□□□ -1.1
VCAN-207ENST00000507162 DDX39AO00148 427 aaKnown RBP8.19□□□□□ -1.1
VCAN-207ENST00000507162 MEIS2O14770 477 aa8.19□□□□□ -1.1
VCAN-207ENST00000507162 MAFGO15525 162 aa8.19□□□□□ -1.1
VCAN-207ENST00000507162 ECI2O75521 394 aa8.19□□□□□ -1.1
VCAN-207ENST00000507162 RPP40O75818 363 aaKnown RBP8.19□□□□□ -1.1
VCAN-207ENST00000507162 C22orf31O95567 290 aa8.19□□□□□ -1.1
VCAN-207ENST00000507162 POMCP01189 267 aa8.19□□□□□ -1.1
VCAN-207ENST00000507162 CHRNB1P11230 501 aa8.19□□□□□ -1.1
VCAN-207ENST00000507162 SKIP12755 728 aa8.19□□□□□ -1.1
VCAN-207ENST00000507162 CSRP1P21291 193 aaKnown RBP8.19□□□□□ -1.1
VCAN-207ENST00000507162 CCNE1P24864 410 aa8.19□□□□□ -1.1
VCAN-207ENST00000507162 TMOD1P28289 359 aa8.19□□□□□ -1.1
VCAN-207ENST00000507162 SLC26A2P50443 739 aa8.19□□□□□ -1.1
VCAN-207ENST00000507162 AFF1P51825 1210 aaKnown RBP8.19□□□□□ -1.1
VCAN-207ENST00000507162 SLC35G1Q2M3R5 365 aa8.19□□□□□ -1.1
VCAN-207ENST00000507162 IFIT1BQ5T764 474 aaKnown RBP8.19□□□□□ -1.1
VCAN-207ENST00000507162 SWSAP1Q6NVH7 229 aa8.19□□□□□ -1.1
VCAN-207ENST00000507162 LILRA6Q6PI73 481 aa8.19□□□□□ -1.1
VCAN-207ENST00000507162 ZNF605Q86T29 641 aa8.19□□□□□ -1.1
VCAN-207ENST00000507162 LRRC71Q8N4P6 559 aa8.19□□□□□ -1.1
VCAN-207ENST00000507162 NLRP7Q8WX94 980 aa8.19□□□□□ -1.1
VCAN-207ENST00000507162 ZNF302Q9NR11 478 aa8.19□□□□□ -1.1
VCAN-207ENST00000507162 KCNH7Q9NS40 1196 aa8.19□□□□□ -1.1
VCAN-207ENST00000507162 C2orf42Q9NWW7 574 aa8.19□□□□□ -1.1
VCAN-207ENST00000507162 CACNA2D2Q9NY47 1150 aa8.19□□□□□ -1.1
VCAN-207ENST00000507162 ZSWIM5Q9P217 1185 aa8.19□□□□□ -1.1
VCAN-207ENST00000507162 MRPS23Q9Y3D9 190 aaKnown RBP8.19□□□□□ -1.1
VCAN-207ENST00000507162 GREB1Q4ZG55 1949 aa8.19□□□□□ -1.1
VCAN-207ENST00000507162 PALM3A6NDB9 673 aaPredicted RBP8.18□□□□□ -1.1
VCAN-207ENST00000507162 ZBTB42B2RXF5 422 aa8.18□□□□□ -1.1
VCAN-207ENST00000507162 ZNF213O14771 459 aa8.18□□□□□ -1.1
VCAN-207ENST00000507162 XYLBO75191 536 aa8.18□□□□□ -1.1
VCAN-207ENST00000507162 CAVIN2O95810 425 aa8.18□□□□□ -1.1
VCAN-207ENST00000507162 DARSP14868 501 aaKnown RBP8.18□□□□□ -1.1
VCAN-207ENST00000507162 RDXP35241 583 aaKnown RBP8.18□□□□□ -1.1
VCAN-207ENST00000507162 DSG1Q02413 1049 aa8.18□□□□□ -1.1
VCAN-207ENST00000507162 CREB5Q02930 508 aa8.18□□□□□ -1.1
VCAN-207ENST00000507162 SCAPQ12770 1279 aa8.18□□□□□ -1.1
VCAN-207ENST00000507162 MCMDC2Q4G0Z9 681 aa8.18□□□□□ -1.1
VCAN-207ENST00000507162 LIN9Q5TKA1 542 aa8.18□□□□□ -1.1
VCAN-207ENST00000507162 NPAS3Q8IXF0 933 aa8.18□□□□□ -1.1
VCAN-207ENST00000507162 CHCHD4Q8N4Q1 142 aa8.18□□□□□ -1.1
VCAN-207ENST00000507162 GAB3Q8WWW8 586 aa8.18□□□□□ -1.1
VCAN-207ENST00000507162 RSPH1Q8WYR4 309 aa8.18□□□□□ -1.1
VCAN-207ENST00000507162 PGBD4Q96DM1 585 aa8.18□□□□□ -1.1
VCAN-207ENST00000507162 TMEM175Q9BSA9 504 aa8.18□□□□□ -1.1
VCAN-207ENST00000507162 UBAC1Q9BSL1 405 aa8.18□□□□□ -1.1
VCAN-207ENST00000507162 TRMT61BQ9BVS5 477 aaKnown RBP8.18□□□□□ -1.1
VCAN-207ENST00000507162 RIOX1Q9H6W3 641 aa8.18□□□□□ -1.1
VCAN-207ENST00000507162 CHST12Q9NRB3 414 aa8.18□□□□□ -1.1
VCAN-207ENST00000507162 HELLSQ9NRZ9 838 aa8.18□□□□□ -1.1
VCAN-207ENST00000507162 BMP2KQ9NSY1 1161 aaPredicted RBP8.18□□□□□ -1.1
VCAN-207ENST00000507162 FAM105AQ9NUU6 356 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms