RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 CASD1Q96PB1 797 aa20.01■□□□□ 0.79
NPHP4-210ENST00000506941 C17orf80Q9BSJ5 609 aa20.01■□□□□ 0.79
NPHP4-210ENST00000506941 HCSTQ9UBK5 93 aa20.01■□□□□ 0.79
NPHP4-210ENST00000506941 ANK1P16157 1881 aa20.01■□□□□ 0.79
NPHP4-210ENST00000506941 FRMD3A2A2Y4 597 aa20■□□□□ 0.79
NPHP4-210ENST00000506941 TBKBP1A7MCY6 615 aa20■□□□□ 0.79
NPHP4-210ENST00000506941 NPTXRO95502 500 aa20■□□□□ 0.79
NPHP4-210ENST00000506941 SKIP12755 728 aa20■□□□□ 0.79
NPHP4-210ENST00000506941 NDUFA8P51970 172 aa20■□□□□ 0.79
NPHP4-210ENST00000506941 AGMOQ6ZNB7 445 aa20■□□□□ 0.79
NPHP4-210ENST00000506941 HAUS6Q7Z4H7 955 aa20■□□□□ 0.79
NPHP4-210ENST00000506941 FIBCD1Q8N539 461 aa20■□□□□ 0.79
NPHP4-210ENST00000506941 FSIP1Q8NA03 581 aa20■□□□□ 0.79
NPHP4-210ENST00000506941 HELQQ8TDG4 1101 aa20■□□□□ 0.79
NPHP4-210ENST00000506941 TRIM9Q9C026 710 aa20■□□□□ 0.79
NPHP4-210ENST00000506941 NXF3Q9H4D5 531 aaKnown RBP20■□□□□ 0.79
NPHP4-210ENST00000506941 MAGEF1Q9HAY2 307 aa20■□□□□ 0.79
NPHP4-210ENST00000506941 SERTAD1Q9UHV2 236 aa20■□□□□ 0.79
NPHP4-210ENST00000506941 MTUS1Q9ULD2 1270 aa20■□□□□ 0.79
NPHP4-210ENST00000506941 HES2Q9Y543 173 aa20■□□□□ 0.79
NPHP4-210ENST00000506941 IPPQ9Y573 584 aa20■□□□□ 0.79
NPHP4-210ENST00000506941 MRPL42Q9Y6G3 142 aaKnown RBP20■□□□□ 0.79
NPHP4-210ENST00000506941 K7ENM7 598 aa19.99■□□□□ 0.79
NPHP4-210ENST00000506941 N4BP3O15049 544 aa19.99■□□□□ 0.79
NPHP4-210ENST00000506941 TRAK2O60296 914 aa19.99■□□□□ 0.79
NPHP4-210ENST00000506941 CASP1P29466 404 aa19.99■□□□□ 0.79
NPHP4-210ENST00000506941 NMT1P30419 496 aaKnown RBP19.99■□□□□ 0.79
NPHP4-210ENST00000506941 ERVK-21P61565 698 aa19.99■□□□□ 0.79
NPHP4-210ENST00000506941 ATF7IP2Q5U623 682 aa19.99■□□□□ 0.79
NPHP4-210ENST00000506941 GRAMD1CQ8IYS0 662 aa19.99■□□□□ 0.79
NPHP4-210ENST00000506941 MRPS27Q92552 414 aaKnown RBP19.99■□□□□ 0.79
NPHP4-210ENST00000506941 KCNN1Q92952 543 aa19.99■□□□□ 0.79
NPHP4-210ENST00000506941 CLP1Q92989 425 aaKnown RBP19.99■□□□□ 0.79
NPHP4-210ENST00000506941 IPO9Q96P70 1041 aaKnown RBP19.99■□□□□ 0.79
NPHP4-210ENST00000506941 TGS1Q96RS0 853 aaKnown RBP19.99■□□□□ 0.79
NPHP4-210ENST00000506941 ACO2Q99798 780 aaKnown RBP19.99■□□□□ 0.79
NPHP4-210ENST00000506941 TMEM117Q9H0C3 514 aa19.99■□□□□ 0.79
NPHP4-210ENST00000506941 RNF39Q9H2S5 420 aa19.99■□□□□ 0.79
NPHP4-210ENST00000506941 PRDM12Q9H4Q4 367 aa19.99■□□□□ 0.79
NPHP4-210ENST00000506941 KCNG1Q9UIX4 513 aa19.99■□□□□ 0.79
NPHP4-210ENST00000506941 PRUNE2Q8WUY3 3088 aa19.99■□□□□ 0.79
NPHP4-210ENST00000506941 HOXA2O43364 376 aa19.98■□□□□ 0.79
NPHP4-210ENST00000506941 SLFN14P0C7P3 912 aa19.98■□□□□ 0.79
NPHP4-210ENST00000506941 IDEP14735 1019 aa19.98■□□□□ 0.79
NPHP4-210ENST00000506941 TMEM132AQ24JP5 1023 aa19.98■□□□□ 0.79
NPHP4-210ENST00000506941 CNNM4Q6P4Q7 775 aa19.98■□□□□ 0.79
NPHP4-210ENST00000506941 LRRC55Q6ZSA7 311 aa19.98■□□□□ 0.79
NPHP4-210ENST00000506941 FAM178BQ8IXR5 827 aa19.98■□□□□ 0.79
NPHP4-210ENST00000506941 ARNTL2Q8WYA1 636 aa19.98■□□□□ 0.79
NPHP4-210ENST00000506941 PYM1Q9BRP8 204 aaKnown RBP19.98■□□□□ 0.79
NPHP4-210ENST00000506941 TARS2Q9BW92 718 aaKnown RBP19.98■□□□□ 0.79
NPHP4-210ENST00000506941 MRPL4Q9BYD3 311 aaKnown RBP19.98■□□□□ 0.79
NPHP4-210ENST00000506941 RFXAPO00287 272 aa19.97■□□□□ 0.79
NPHP4-210ENST00000506941 ABLIM1O14639 778 aa19.97■□□□□ 0.79
NPHP4-210ENST00000506941 GAP43P17677 238 aa19.97■□□□□ 0.79
NPHP4-210ENST00000506941 SYKP43405 635 aa19.97■□□□□ 0.79
NPHP4-210ENST00000506941 AFMP43652 599 aa19.97■□□□□ 0.79
NPHP4-210ENST00000506941 ZC2HC1CQ53FD0 456 aaPredicted RBP19.97■□□□□ 0.79
NPHP4-210ENST00000506941 PGBD4Q96DM1 585 aa19.97■□□□□ 0.79
NPHP4-210ENST00000506941 CDX2Q99626 313 aaPredicted RBP19.97■□□□□ 0.79
NPHP4-210ENST00000506941 C7orf25Q9BPX7 421 aa19.97■□□□□ 0.79
NPHP4-210ENST00000506941 FGFBP2Q9BYJ0 223 aa19.97■□□□□ 0.79
NPHP4-210ENST00000506941 TRIM6Q9C030 488 aaPredicted RBP19.97■□□□□ 0.79
NPHP4-210ENST00000506941 PTPRHQ9HD43 1115 aa19.97■□□□□ 0.79
NPHP4-210ENST00000506941 PANK4Q9NVE7 773 aa19.97■□□□□ 0.79
NPHP4-210ENST00000506941 TBC1D7Q9P0N9 293 aa19.97■□□□□ 0.79
NPHP4-210ENST00000506941 SEL1LQ9UBV2 794 aa19.97■□□□□ 0.79
NPHP4-210ENST00000506941 TNFSF13BQ9Y275 285 aa19.97■□□□□ 0.79
NPHP4-210ENST00000506941 PRRC2BQ5JSZ5 2229 aaKnown RBP19.96■□□□□ 0.79
NPHP4-210ENST00000506941 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.96■□□□□ 0.79
NPHP4-210ENST00000506941 H0YCG3 227 aa19.96■□□□□ 0.79
NPHP4-210ENST00000506941 OFD1O75665 1012 aa19.96■□□□□ 0.79
NPHP4-210ENST00000506941 PPP1R37O75864 691 aa19.96■□□□□ 0.79
NPHP4-210ENST00000506941 PROZP22891 400 aa19.96■□□□□ 0.79
NPHP4-210ENST00000506941 AFF1P51825 1210 aaKnown RBP19.96■□□□□ 0.79
NPHP4-210ENST00000506941 ASIC1P78348 528 aa19.96■□□□□ 0.79
NPHP4-210ENST00000506941 GTF2BQ00403 316 aa19.96■□□□□ 0.79
NPHP4-210ENST00000506941 AMPD3Q01432 767 aa19.96■□□□□ 0.79
NPHP4-210ENST00000506941 STRN3Q13033 797 aa19.96■□□□□ 0.79
NPHP4-210ENST00000506941 COASYQ13057 564 aa19.96■□□□□ 0.79
NPHP4-210ENST00000506941 CUL4BQ13620 913 aa19.96■□□□□ 0.79
NPHP4-210ENST00000506941 EPC2Q52LR7 807 aa19.96■□□□□ 0.79
NPHP4-210ENST00000506941 TMEM192Q8IY95 271 aa19.96■□□□□ 0.79
NPHP4-210ENST00000506941 CEP57L1Q8IYX8 460 aa19.96■□□□□ 0.79
NPHP4-210ENST00000506941 ABI1Q8IZP0 508 aa19.96■□□□□ 0.79
NPHP4-210ENST00000506941 CNNM3Q8NE01 707 aa19.96■□□□□ 0.79
NPHP4-210ENST00000506941 MYLIPQ8WY64 445 aa19.96■□□□□ 0.79
NPHP4-210ENST00000506941 PAGE5Q96GU1 130 aa19.96■□□□□ 0.79
NPHP4-210ENST00000506941 APOL6Q9BWW8 343 aa19.96■□□□□ 0.79
NPHP4-210ENST00000506941 STRA6Q9BX79 667 aa19.96■□□□□ 0.79
NPHP4-210ENST00000506941 LRRC27Q9C0I9 530 aa19.96■□□□□ 0.79
NPHP4-210ENST00000506941 BLZF1Q9H2G9 400 aa19.96■□□□□ 0.79
NPHP4-210ENST00000506941 ST6GALNAC4Q9H4F1 302 aa19.96■□□□□ 0.79
NPHP4-210ENST00000506941 CWH43Q9H720 699 aa19.96■□□□□ 0.79
NPHP4-210ENST00000506941 RSAD1Q9HA92 442 aa19.96■□□□□ 0.79
NPHP4-210ENST00000506941 TYW1Q9NV66 732 aaKnown RBP19.96■□□□□ 0.79
NPHP4-210ENST00000506941 TBX20Q9UMR3 447 aa19.96■□□□□ 0.79
NPHP4-210ENST00000506941 MYO7AQ13402 2215 aa19.95■□□□□ 0.78
NPHP4-210ENST00000506941 ITGA4P13612 1032 aa19.95■□□□□ 0.78
NPHP4-210ENST00000506941 AKAP5P24588 427 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms